RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 SLC52A1Q9NWF4 448 aa18.79■□□□□ 0.6
TMEM50B-201ENST00000420455 NBPF1Q3BBV0 1214 aa18.78■□□□□ 0.6
TMEM50B-201ENST00000420455 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
TMEM50B-201ENST00000420455 ZFYVE9O95405 1425 aa18.78■□□□□ 0.6
TMEM50B-201ENST00000420455 YTHDC1Q96MU7 727 aaKnown RBP18.77■□□□□ 0.6
TMEM50B-201ENST00000420455 PIK3C2GO75747 1445 aa18.77■□□□□ 0.6
TMEM50B-201ENST00000420455 KIF7Q2M1P5 1343 aa18.76■□□□□ 0.59
TMEM50B-201ENST00000420455 MYO5BQ9ULV0 1848 aa18.76■□□□□ 0.59
TMEM50B-201ENST00000420455 KDM5AP29375 1690 aaKnown RBP18.74■□□□□ 0.59
TMEM50B-201ENST00000420455 MYO3AQ8NEV4 1616 aa18.73■□□□□ 0.59
TMEM50B-201ENST00000420455 SCAF11Q99590 1463 aaKnown RBP18.73■□□□□ 0.59
TMEM50B-201ENST00000420455 CENPBP07199 599 aaPredicted RBP18.72■□□□□ 0.59
TMEM50B-201ENST00000420455 IDI1Q13907 227 aa18.72■□□□□ 0.59
TMEM50B-201ENST00000420455 ADGRF5Q8IZF2 1346 aa18.72■□□□□ 0.59
TMEM50B-201ENST00000420455 ADGRB1O14514 1584 aa18.71■□□□□ 0.59
TMEM50B-201ENST00000420455 ST20-MTHFSA0A0A6YYL1 179 aa18.71■□□□□ 0.59
TMEM50B-201ENST00000420455 ZMYM3Q14202 1370 aa18.7■□□□□ 0.58
TMEM50B-201ENST00000420455 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
TMEM50B-201ENST00000420455 TESK2Q96S53 571 aa18.69■□□□□ 0.58
TMEM50B-201ENST00000420455 FBXO31Q5XUX0 539 aaPredicted RBP18.69■□□□□ 0.58
TMEM50B-201ENST00000420455 A2ML1A8K2U0 1454 aa18.66■□□□□ 0.58
TMEM50B-201ENST00000420455 C14orf93Q9H972 538 aaKnown RBP18.66■□□□□ 0.58
TMEM50B-201ENST00000420455 FER1L4A9Z1Z3 1794 aa18.64■□□□□ 0.58
TMEM50B-201ENST00000420455 C3P01024 1663 aa18.64■□□□□ 0.57
TMEM50B-201ENST00000420455 CCER2I3L3R5 266 aa18.63■□□□□ 0.57
TMEM50B-201ENST00000420455 VGFO15240 615 aaPredicted RBP18.63■□□□□ 0.57
TMEM50B-201ENST00000420455 CFAP70Q5T0N1 1121 aa18.62■□□□□ 0.57
TMEM50B-201ENST00000420455 EIF3AQ14152 1382 aaKnown RBP18.61■□□□□ 0.57
TMEM50B-201ENST00000420455 UBR1Q8IWV7 1749 aa18.61■□□□□ 0.57
TMEM50B-201ENST00000420455 MLECQ14165 292 aa18.61■□□□□ 0.57
TMEM50B-201ENST00000420455 SBNO2Q9Y2G9 1366 aa18.6■□□□□ 0.57
TMEM50B-201ENST00000420455 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
TMEM50B-201ENST00000420455 CHGAP10645 457 aaKnown RBP18.6■□□□□ 0.57
TMEM50B-201ENST00000420455 DISP3Q9P2K9 1392 aa18.6■□□□□ 0.57
TMEM50B-201ENST00000420455 ANP32CO43423 234 aa18.6■□□□□ 0.57
TMEM50B-201ENST00000420455 ASXL1Q8IXJ9 1541 aa18.59■□□□□ 0.57
TMEM50B-201ENST00000420455 ARHGEF28Q8N1W1 1705 aaKnown RBP18.58■□□□□ 0.56
TMEM50B-201ENST00000420455 TNRQ92752 1358 aa18.58■□□□□ 0.56
TMEM50B-201ENST00000420455 NLRP1Q9C000 1473 aa18.57■□□□□ 0.56
TMEM50B-201ENST00000420455 NRXN3Q9Y4C0 1643 aa18.56■□□□□ 0.56
TMEM50B-201ENST00000420455 ESF1Q9H501 851 aaKnown RBP18.55■□□□□ 0.56
TMEM50B-201ENST00000420455 ALKQ9UM73 1620 aa18.55■□□□□ 0.56
TMEM50B-201ENST00000420455 MYOM1P52179 1685 aa18.55■□□□□ 0.56
TMEM50B-201ENST00000420455 ADAMTSL3P82987 1691 aa18.55■□□□□ 0.56
TMEM50B-201ENST00000420455 QRICH2Q9H0J4 1663 aa18.54■□□□□ 0.56
TMEM50B-201ENST00000420455 SLC24A1O60721 1099 aa18.54■□□□□ 0.56
TMEM50B-201ENST00000420455 TMF1P82094 1093 aa18.54■□□□□ 0.56
TMEM50B-201ENST00000420455 RIMS2Q9UQ26 1411 aa18.53■□□□□ 0.56
TMEM50B-201ENST00000420455 GTF3C3Q9Y5Q9 886 aa18.52■□□□□ 0.56
TMEM50B-201ENST00000420455 PRKRIP1Q9H875 184 aaPredicted RBP18.51■□□□□ 0.55
TMEM50B-201ENST00000420455 PTPRMP28827 1452 aa18.5■□□□□ 0.55
TMEM50B-201ENST00000420455 SLIT1O75093 1534 aa18.48■□□□□ 0.55
TMEM50B-201ENST00000420455 DLC1Q96QB1 1528 aa18.48■□□□□ 0.55
TMEM50B-201ENST00000420455 KTN1Q86UP2 1357 aaKnown RBP18.48■□□□□ 0.55
TMEM50B-201ENST00000420455 ARHGAP23Q9P227 1491 aa18.47■□□□□ 0.55
TMEM50B-201ENST00000420455 PER1O15534 1290 aaPredicted RBP18.47■□□□□ 0.55
TMEM50B-201ENST00000420455 CDCA8Q53HL2 280 aa18.47■□□□□ 0.55
TMEM50B-201ENST00000420455 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.46■□□□□ 0.55
TMEM50B-201ENST00000420455 TMEM2Q9UHN6 1383 aa18.46■□□□□ 0.55
TMEM50B-201ENST00000420455 KNDC1Q76NI1 1749 aa18.46■□□□□ 0.55
TMEM50B-201ENST00000420455 RIMS1Q86UR5 1692 aaKnown RBP18.45■□□□□ 0.54
TMEM50B-201ENST00000420455 CENPJQ9HC77 1338 aaPredicted RBP18.45■□□□□ 0.54
TMEM50B-201ENST00000420455 NUTM2DQ5VT03 806 aaPredicted RBP18.45■□□□□ 0.54
TMEM50B-201ENST00000420455 YTHDC2Q9H6S0 1430 aaKnown RBP18.45■□□□□ 0.54
TMEM50B-201ENST00000420455 PUS7Q96PZ0 661 aaKnown RBP18.44■□□□□ 0.54
TMEM50B-201ENST00000420455 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
TMEM50B-201ENST00000420455 TMEM132EQ6IEE7 984 aa18.43■□□□□ 0.54
TMEM50B-201ENST00000420455 STAG3Q9UJ98 1225 aa18.43■□□□□ 0.54
TMEM50B-201ENST00000420455 TULP4Q9NRJ4 1543 aa18.42■□□□□ 0.54
TMEM50B-201ENST00000420455 MED14O60244 1454 aa18.41■□□□□ 0.54
TMEM50B-201ENST00000420455 CEBPAP49715 358 aaPredicted RBP18.4■□□□□ 0.54
TMEM50B-201ENST00000420455 TRAK1Q9UPV9 953 aa18.4■□□□□ 0.54
TMEM50B-201ENST00000420455 HDGFP51858 240 aaKnown RBP18.4■□□□□ 0.54
TMEM50B-201ENST00000420455 LRPPRCP42704 1394 aaKnown RBP18.39■□□□□ 0.54
TMEM50B-201ENST00000420455 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.54
TMEM50B-201ENST00000420455 TECPR2O15040 1411 aa18.39■□□□□ 0.53
TMEM50B-201ENST00000420455 PLEKHG1Q9ULL1 1385 aa18.39■□□□□ 0.53
TMEM50B-201ENST00000420455 POLR3GLQ9BT43 218 aa18.38■□□□□ 0.53
TMEM50B-201ENST00000420455 CEP170BQ9Y4F5 1589 aaPredicted RBP18.38■□□□□ 0.53
TMEM50B-201ENST00000420455 ABCC11Q96J66 1382 aa18.38■□□□□ 0.53
TMEM50B-201ENST00000420455 CPS1P31327 1500 aa18.37■□□□□ 0.53
TMEM50B-201ENST00000420455 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
TMEM50B-201ENST00000420455 NPC1L1Q9UHC9 1359 aa18.37■□□□□ 0.53
TMEM50B-201ENST00000420455 RALBP1Q15311 655 aa18.36■□□□□ 0.53
TMEM50B-201ENST00000420455 CCDC184Q52MB2 194 aa18.36■□□□□ 0.53
TMEM50B-201ENST00000420455 PANK3Q9H999 370 aa18.36■□□□□ 0.53
TMEM50B-201ENST00000420455 DIP2AQ14689 1571 aa18.35■□□□□ 0.53
TMEM50B-201ENST00000420455 USP32Q8NFA0 1604 aa18.35■□□□□ 0.53
TMEM50B-201ENST00000420455 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
TMEM50B-201ENST00000420455 FAM135BQ49AJ0 1406 aa18.33■□□□□ 0.52
TMEM50B-201ENST00000420455 METP08581 1390 aa18.33■□□□□ 0.52
TMEM50B-201ENST00000420455 LTKP29376 864 aa18.31■□□□□ 0.52
TMEM50B-201ENST00000420455 EVC2Q86UK5 1308 aa18.3■□□□□ 0.52
TMEM50B-201ENST00000420455 MYBBP1AQ9BQG0 1328 aaKnown RBP18.3■□□□□ 0.52
TMEM50B-201ENST00000420455 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
TMEM50B-201ENST00000420455 BRD4O60885 1362 aaPredicted RBP18.29■□□□□ 0.52
TMEM50B-201ENST00000420455 NINLQ9Y2I6 1382 aa18.29■□□□□ 0.52
TMEM50B-201ENST00000420455 SETD1BQ9UPS6 1966 aaKnown RBP18.29■□□□□ 0.52
TMEM50B-201ENST00000420455 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
TMEM50B-201ENST00000420455 ADGRB2O60241 1585 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms