RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 ARHGAP23Q9P227 1491 aa27.16■■□□□ 1.94
ECHDC3-202ENST00000420401 E9PCH4 1651 aa27.14■■□□□ 1.94
ECHDC3-202ENST00000420401 SETD5Q9C0A6 1442 aa27.14■■□□□ 1.93
ECHDC3-202ENST00000420401 RGS17Q9UGC6 210 aaPredicted RBP27.13■■□□□ 1.93
ECHDC3-202ENST00000420401 PIK3C2BO00750 1634 aa27.12■■□□□ 1.93
ECHDC3-202ENST00000420401 SLC4A1APQ9BWU0 796 aaKnown RBP27.11■■□□□ 1.93
ECHDC3-202ENST00000420401 FAM135BQ49AJ0 1406 aa27.07■■□□□ 1.92
ECHDC3-202ENST00000420401 TMEM2Q9UHN6 1383 aa27.07■■□□□ 1.92
ECHDC3-202ENST00000420401 KDM5AP29375 1690 aaKnown RBP27.05■■□□□ 1.92
ECHDC3-202ENST00000420401 TMEM94Q12767 1356 aa27.04■■□□□ 1.92
ECHDC3-202ENST00000420401 ADGRB3O60242 1522 aa27.04■■□□□ 1.92
ECHDC3-202ENST00000420401 ROBO1Q9Y6N7 1651 aa27.02■■□□□ 1.92
ECHDC3-202ENST00000420401 RAB3GAP2Q9H2M9 1393 aa27.02■■□□□ 1.92
ECHDC3-202ENST00000420401 CHGAP10645 457 aaKnown RBP27.02■■□□□ 1.92
ECHDC3-202ENST00000420401 KCNA6P17658 529 aa27.02■■□□□ 1.92
ECHDC3-202ENST00000420401 PROSER2Q86WR7 435 aaPredicted RBP27.02■■□□□ 1.92
ECHDC3-202ENST00000420401 MPHOSPH9Q99550 1183 aa27.01■■□□□ 1.91
ECHDC3-202ENST00000420401 SLC26A8Q96RN1 970 aa27■■□□□ 1.91
ECHDC3-202ENST00000420401 POTEAQ6S8J7 498 aa26.99■■□□□ 1.91
ECHDC3-202ENST00000420401 HDGFP51858 240 aaKnown RBP26.98■■□□□ 1.91
ECHDC3-202ENST00000420401 SPHKAPQ2M3C7 1700 aa26.97■■□□□ 1.91
ECHDC3-202ENST00000420401 HRCP23327 699 aa26.97■■□□□ 1.91
ECHDC3-202ENST00000420401 RBM33Q96EV2 1170 aaKnown RBP26.97■■□□□ 1.91
ECHDC3-202ENST00000420401 BCANQ96GW7 911 aa26.97■■□□□ 1.91
ECHDC3-202ENST00000420401 TMEM131LA2VDJ0 1609 aa26.94■■□□□ 1.9
ECHDC3-202ENST00000420401 TRPM2O94759 1503 aa26.94■■□□□ 1.9
ECHDC3-202ENST00000420401 FOXD1Q16676 465 aa26.91■■□□□ 1.9
ECHDC3-202ENST00000420401 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.91■■□□□ 1.9
ECHDC3-202ENST00000420401 PHLPP1O60346 1717 aa26.9■■□□□ 1.9
ECHDC3-202ENST00000420401 MSH6P52701 1360 aa26.9■■□□□ 1.9
ECHDC3-202ENST00000420401 RIMS2Q9UQ26 1411 aa26.9■■□□□ 1.9
ECHDC3-202ENST00000420401 NKTRP30414 1462 aaKnown RBP26.89■■□□□ 1.9
ECHDC3-202ENST00000420401 PPP1R15AO75807 674 aaPredicted RBP26.89■■□□□ 1.9
ECHDC3-202ENST00000420401 ZFYVE9O95405 1425 aa26.88■■□□□ 1.89
ECHDC3-202ENST00000420401 SLAIN2Q9P270 581 aa26.87■■□□□ 1.89
ECHDC3-202ENST00000420401 NWD1Q149M9 1564 aa26.87■■□□□ 1.89
ECHDC3-202ENST00000420401 ZNF326Q5BKZ1 582 aaKnown RBP26.86■■□□□ 1.89
ECHDC3-202ENST00000420401 CLTCL1P53675 1640 aa26.85■■□□□ 1.89
ECHDC3-202ENST00000420401 MYO5BQ9ULV0 1848 aa26.85■■□□□ 1.89
ECHDC3-202ENST00000420401 SETD1AO15047 1707 aaKnown RBP26.83■■□□□ 1.89
ECHDC3-202ENST00000420401 JCADQ9P266 1359 aa26.83■■□□□ 1.88
ECHDC3-202ENST00000420401 CHD2O14647 1828 aaKnown RBP26.82■■□□□ 1.88
ECHDC3-202ENST00000420401 PLEKHG1Q9ULL1 1385 aa26.82■■□□□ 1.88
ECHDC3-202ENST00000420401 CCDC144AA2RUR9 1427 aa26.81■■□□□ 1.88
ECHDC3-202ENST00000420401 NUTM2DQ5VT03 806 aaPredicted RBP26.8■■□□□ 1.88
ECHDC3-202ENST00000420401 TRIM26Q12899 539 aaPredicted RBP26.79■■□□□ 1.88
ECHDC3-202ENST00000420401 KIF1BO60333 1816 aa26.77■■□□□ 1.88
ECHDC3-202ENST00000420401 C14orf37Q86TY3 774 aa26.76■■□□□ 1.87
ECHDC3-202ENST00000420401 RPGRIP1LQ68CZ1 1315 aa26.74■■□□□ 1.87
ECHDC3-202ENST00000420401 MEX3CQ5U5Q3 659 aaKnown RBP26.74■■□□□ 1.87
ECHDC3-202ENST00000420401 COL16A1Q07092 1604 aaPredicted RBP26.72■■□□□ 1.87
ECHDC3-202ENST00000420401 TBX22Q9Y458 520 aa26.71■■□□□ 1.87
ECHDC3-202ENST00000420401 VGFO15240 615 aaPredicted RBP26.7■■□□□ 1.86
ECHDC3-202ENST00000420401 SPATA31A6Q5VVP1 1343 aa26.69■■□□□ 1.86
ECHDC3-202ENST00000420401 NCOA3Q9Y6Q9 1424 aa26.68■■□□□ 1.86
ECHDC3-202ENST00000420401 ZNF772Q68DY9 489 aaPredicted RBP26.68■■□□□ 1.86
ECHDC3-202ENST00000420401 NEXMIFQ5QGS0 1516 aa26.68■■□□□ 1.86
ECHDC3-202ENST00000420401 RGL3Q3MIN7 710 aa26.67■■□□□ 1.86
ECHDC3-202ENST00000420401 ANKRD30BQ9BXX2 1392 aa26.67■■□□□ 1.86
ECHDC3-202ENST00000420401 ATF3P18847 181 aa26.66■■□□□ 1.86
ECHDC3-202ENST00000420401 CADPS2Q86UW7 1296 aa26.66■■□□□ 1.86
ECHDC3-202ENST00000420401 SPATA31E1Q6ZUB1 1445 aa26.65■■□□□ 1.86
ECHDC3-202ENST00000420401 ADAMTS13Q76LX8 1427 aa26.65■■□□□ 1.86
ECHDC3-202ENST00000420401 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.65■■□□□ 1.86
ECHDC3-202ENST00000420401 LRP6O75581 1613 aa26.64■■□□□ 1.85
ECHDC3-202ENST00000420401 DIP2AQ14689 1571 aa26.63■■□□□ 1.85
ECHDC3-202ENST00000420401 C19orf44Q9H6X5 657 aa26.63■■□□□ 1.85
ECHDC3-202ENST00000420401 SHPRHQ149N8 1683 aa26.62■■□□□ 1.85
ECHDC3-202ENST00000420401 PIK3R4Q99570 1358 aa26.61■■□□□ 1.85
ECHDC3-202ENST00000420401 SETBP1Q9Y6X0 1596 aa26.6■■□□□ 1.85
ECHDC3-202ENST00000420401 AHDC1Q5TGY3 1603 aaPredicted RBP26.6■■□□□ 1.85
ECHDC3-202ENST00000420401 UPF1Q92900 1129 aaKnown RBP eCLIP26.59■■□□□ 1.85
ECHDC3-202ENST00000420401 RXRBP28702 533 aa26.56■■□□□ 1.84
ECHDC3-202ENST00000420401 NUTM2BA6NNL0 878 aaPredicted RBP26.55■■□□□ 1.84
ECHDC3-202ENST00000420401 NUTM2EB1AL46 878 aaPredicted RBP26.55■■□□□ 1.84
ECHDC3-202ENST00000420401 NUTM2AQ8IVF1 878 aaPredicted RBP26.55■■□□□ 1.84
ECHDC3-202ENST00000420401 PPLO60437 1756 aa26.55■■□□□ 1.84
ECHDC3-202ENST00000420401 NRXN3Q9Y4C0 1643 aa26.54■■□□□ 1.84
ECHDC3-202ENST00000420401 AMOTL2Q9Y2J4 779 aa26.53■■□□□ 1.84
ECHDC3-202ENST00000420401 ADGRF5Q8IZF2 1346 aa26.52■■□□□ 1.84
ECHDC3-202ENST00000420401 BRINP3Q76B58 766 aa26.51■■□□□ 1.83
ECHDC3-202ENST00000420401 METP08581 1390 aa26.5■■□□□ 1.83
ECHDC3-202ENST00000420401 PTPRUQ92729 1446 aa26.48■■□□□ 1.83
ECHDC3-202ENST00000420401 IFT172Q9UG01 1749 aa26.45■■□□□ 1.83
ECHDC3-202ENST00000420401 AFF2P51816 1311 aa26.45■■□□□ 1.83
ECHDC3-202ENST00000420401 STAC3Q96MF2 364 aa26.45■■□□□ 1.82
ECHDC3-202ENST00000420401 DCCP43146 1447 aa26.44■■□□□ 1.82
ECHDC3-202ENST00000420401 MYOM2P54296 1465 aa26.43■■□□□ 1.82
ECHDC3-202ENST00000420401 CDK12Q9NYV4 1490 aaPredicted RBP26.43■■□□□ 1.82
ECHDC3-202ENST00000420401 DCAF11Q8TEB1 546 aa26.43■■□□□ 1.82
ECHDC3-202ENST00000420401 ASXL1Q8IXJ9 1541 aa26.43■■□□□ 1.82
ECHDC3-202ENST00000420401 PIK3C2GO75747 1445 aa26.42■■□□□ 1.82
ECHDC3-202ENST00000420401 DHX57Q6P158 1386 aaKnown RBP26.42■■□□□ 1.82
ECHDC3-202ENST00000420401 LRRC59Q96AG4 307 aaKnown RBP26.41■■□□□ 1.82
ECHDC3-202ENST00000420401 KDM2AQ9Y2K7 1162 aa26.4■■□□□ 1.82
ECHDC3-202ENST00000420401 NHSL1Q5SYE7 1610 aa26.39■■□□□ 1.82
ECHDC3-202ENST00000420401 NRXN1Q9ULB1 1477 aa26.39■■□□□ 1.82
ECHDC3-202ENST00000420401 XRN1Q8IZH2 1706 aaKnown RBP26.39■■□□□ 1.81
ECHDC3-202ENST00000420401 C8orf37Q96NL8 207 aa26.38■■□□□ 1.81
ECHDC3-202ENST00000420401 C14orf93Q9H972 538 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms