RNA–Protein interactions for RNA: ENST00000420115.6

CDV3-202, Transcript of CDV3 homolog, humanhuman

TSL 2 BASIC

Gene CDV3, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-202ENST00000420115 PLEKHH1Q9ULM0 1364 aa12.99□□□□□ -0.33
CDV3-202ENST00000420115 LAMC1P11047 1609 aa12.98□□□□□ -0.33
CDV3-202ENST00000420115 PRDM15P57071 1507 aaPredicted RBP12.98□□□□□ -0.33
CDV3-202ENST00000420115 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
CDV3-202ENST00000420115 GZF1Q9H116 711 aaPredicted RBP12.98□□□□□ -0.33
CDV3-202ENST00000420115 ERBINQ96RT1 1412 aa12.97□□□□□ -0.33
CDV3-202ENST00000420115 TSPY4P0CV99 314 aa12.97□□□□□ -0.33
CDV3-202ENST00000420115 TSPY10P0CW01 314 aa12.97□□□□□ -0.33
CDV3-202ENST00000420115 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
CDV3-202ENST00000420115 CCDC144AA2RUR9 1427 aa12.97□□□□□ -0.33
CDV3-202ENST00000420115 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.33
CDV3-202ENST00000420115 PDCL3Q9H2J4 239 aa12.96□□□□□ -0.34
CDV3-202ENST00000420115 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
CDV3-202ENST00000420115 FAM135AQ9P2D6 1515 aa12.95□□□□□ -0.34
CDV3-202ENST00000420115 TMF1P82094 1093 aa12.95□□□□□ -0.34
CDV3-202ENST00000420115 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDV3-202ENST00000420115 EIF3AQ14152 1382 aaKnown RBP12.95□□□□□ -0.34
CDV3-202ENST00000420115 FAM13BQ9NYF5 915 aa12.95□□□□□ -0.34
CDV3-202ENST00000420115 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
CDV3-202ENST00000420115 USP19O94966 1318 aa12.94□□□□□ -0.34
CDV3-202ENST00000420115 ZNF830Q96NB3 372 aaPredicted RBP12.94□□□□□ -0.34
CDV3-202ENST00000420115 A2MP01023 1474 aa12.93□□□□□ -0.34
CDV3-202ENST00000420115 CLASP1Q7Z460 1538 aa12.93□□□□□ -0.34
CDV3-202ENST00000420115 CLCN1P35523 988 aa12.93□□□□□ -0.34
CDV3-202ENST00000420115 SLFN5Q08AF3 891 aa12.93□□□□□ -0.34
CDV3-202ENST00000420115 PPP2R1AP30153 589 aa12.93□□□□□ -0.34
CDV3-202ENST00000420115 ABCC10Q5T3U5 1492 aa12.92□□□□□ -0.34
CDV3-202ENST00000420115 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
CDV3-202ENST00000420115 BECN1Q14457 450 aa12.91□□□□□ -0.34
CDV3-202ENST00000420115 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
CDV3-202ENST00000420115 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
CDV3-202ENST00000420115 GRIN2AQ12879 1464 aa12.91□□□□□ -0.34
CDV3-202ENST00000420115 IPO4Q8TEX9 1081 aaKnown RBP12.9□□□□□ -0.34
CDV3-202ENST00000420115 L1TD1Q5T7N2 865 aaKnown RBP12.9□□□□□ -0.34
CDV3-202ENST00000420115 ARHGEF5Q12774 1597 aa12.9□□□□□ -0.34
CDV3-202ENST00000420115 KNSTRNQ9Y448 316 aa12.9□□□□□ -0.34
CDV3-202ENST00000420115 PLA2R1Q13018 1463 aa12.9□□□□□ -0.34
CDV3-202ENST00000420115 MAGI2Q86UL8 1455 aa12.9□□□□□ -0.34
CDV3-202ENST00000420115 NKTRP30414 1462 aaKnown RBP12.89□□□□□ -0.35
CDV3-202ENST00000420115 WDR7Q9Y4E6 1490 aa12.89□□□□□ -0.35
CDV3-202ENST00000420115 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
CDV3-202ENST00000420115 E9PSI1 815 aa12.89□□□□□ -0.35
CDV3-202ENST00000420115 IGHDP01880 384 aa12.89□□□□□ -0.35
CDV3-202ENST00000420115 XRCC6P12956 609 aaKnown RBP eCLIP12.89□□□□□ -0.35
CDV3-202ENST00000420115 HNRNPMP52272 730 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■□□□□ 10.3
CDV3-202ENST00000420115 CHMP4AQ9BY43 222 aa12.89□□□□□ -0.35
CDV3-202ENST00000420115 MAGI1Q96QZ7 1491 aaPredicted RBP12.88□□□□□ -0.35
CDV3-202ENST00000420115 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
CDV3-202ENST00000420115 MYO5CQ9NQX4 1742 aa12.88□□□□□ -0.35
CDV3-202ENST00000420115 NUP160Q12769 1436 aa12.88□□□□□ -0.35
CDV3-202ENST00000420115 ZBTB22O15209 634 aa12.88□□□□□ -0.35
CDV3-202ENST00000420115 SYNJ2O15056 1496 aa12.88□□□□□ -0.35
CDV3-202ENST00000420115 CCDC141Q6ZP82 1450 aa12.88□□□□□ -0.35
CDV3-202ENST00000420115 BCAR3O75815 825 aa12.88□□□□□ -0.35
CDV3-202ENST00000420115 SEC24BO95487 1268 aa12.88□□□□□ -0.35
CDV3-202ENST00000420115 ERBB4Q15303 1308 aa12.87□□□□□ -0.35
CDV3-202ENST00000420115 SLKQ9H2G2 1235 aaPredicted RBP12.87□□□□□ -0.35
CDV3-202ENST00000420115 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
CDV3-202ENST00000420115 PIK3C2GO75747 1445 aa12.87□□□□□ -0.35
CDV3-202ENST00000420115 NLRP1Q9C000 1473 aa12.86□□□□□ -0.35
CDV3-202ENST00000420115 KIAA1211Q6ZU35 1233 aa12.86□□□□□ -0.35
CDV3-202ENST00000420115 ANTXR1Q9H6X2 564 aa12.86□□□□□ -0.35
CDV3-202ENST00000420115 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
CDV3-202ENST00000420115 ANP32BQ92688 251 aaKnown RBP12.86□□□□□ -0.35
CDV3-202ENST00000420115 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
CDV3-202ENST00000420115 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
CDV3-202ENST00000420115 RNF17Q9BXT8 1623 aaKnown RBP12.85□□□□□ -0.35
CDV3-202ENST00000420115 PDE3AQ14432 1141 aa12.85□□□□□ -0.35
CDV3-202ENST00000420115 CCDC146Q8IYE0 955 aa12.85□□□□□ -0.35
CDV3-202ENST00000420115 ABCC2Q92887 1545 aa12.84□□□□□ -0.35
CDV3-202ENST00000420115 UNC13BO14795 1591 aa12.84□□□□□ -0.35
CDV3-202ENST00000420115 ABCA8O94911 1581 aa12.84□□□□□ -0.35
CDV3-202ENST00000420115 CLUAP1Q96AJ1 413 aa12.84□□□□□ -0.35
CDV3-202ENST00000420115 CARMIL2Q6F5E8 1435 aa12.84□□□□□ -0.35
CDV3-202ENST00000420115 APAF1O14727 1248 aa12.83□□□□□ -0.35
CDV3-202ENST00000420115 ASXL1Q8IXJ9 1541 aa12.83□□□□□ -0.36
CDV3-202ENST00000420115 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.36
CDV3-202ENST00000420115 SYNMO15061 1565 aa12.83□□□□□ -0.36
CDV3-202ENST00000420115 HAP1P54257 671 aaPredicted RBP12.83□□□□□ -0.36
CDV3-202ENST00000420115 CERS3Q8IU89 383 aa12.83□□□□□ -0.36
CDV3-202ENST00000420115 ATP10BO94823 1461 aa12.82□□□□□ -0.36
CDV3-202ENST00000420115 TMEM51Q9NW97 253 aa12.82□□□□□ -0.36
CDV3-202ENST00000420115 RSPH4AQ5TD94 716 aa12.82□□□□□ -0.36
CDV3-202ENST00000420115 DNAJC5BQ9UF47 199 aa12.82□□□□□ -0.36
CDV3-202ENST00000420115 ESPNB1AK53 854 aa12.81□□□□□ -0.36
CDV3-202ENST00000420115 UPF2Q9HAU5 1272 aaKnown RBP12.81□□□□□ -0.36
CDV3-202ENST00000420115 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
CDV3-202ENST00000420115 SAMD9LQ8IVG5 1584 aa12.81□□□□□ -0.36
CDV3-202ENST00000420115 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
CDV3-202ENST00000420115 SECISBP2LQ93073 1101 aaKnown RBP12.81□□□□□ -0.36
CDV3-202ENST00000420115 TBC1D32Q96NH3 1257 aa12.81□□□□□ -0.36
CDV3-202ENST00000420115 ATP10AO60312 1499 aa12.8□□□□□ -0.36
CDV3-202ENST00000420115 ZBTB7CA1YPR0 619 aa12.8□□□□□ -0.36
CDV3-202ENST00000420115 GOLGA6L3A6NEY3 463 aa12.8□□□□□ -0.36
CDV3-202ENST00000420115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.8□□□□□ -0.369e-9■■■□□ 17
CDV3-202ENST00000420115 IQGAP3Q86VI3 1631 aa12.8□□□□□ -0.36
CDV3-202ENST00000420115 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
CDV3-202ENST00000420115 PLXNC1O60486 1568 aa12.8□□□□□ -0.36
CDV3-202ENST00000420115 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
CDV3-202ENST00000420115 TBC1D2Q9BYX2 928 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms