RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TNRQ92752 1358 aa20.34■□□□□ 0.85
SHMT1P1-201ENST00000419974 NBPF8Q3BBV2 869 aa20.34■□□□□ 0.85
SHMT1P1-201ENST00000419974 TMEM131LA2VDJ0 1609 aa20.34■□□□□ 0.85
SHMT1P1-201ENST00000419974 RGL3Q3MIN7 710 aa20.33■□□□□ 0.85
SHMT1P1-201ENST00000419974 A2ML1A8K2U0 1454 aa20.33■□□□□ 0.84
SHMT1P1-201ENST00000419974 RALGAPBQ86X10 1494 aa20.32■□□□□ 0.84
SHMT1P1-201ENST00000419974 GPRASP1Q5JY77 1395 aa20.3■□□□□ 0.84
SHMT1P1-201ENST00000419974 IFT172Q9UG01 1749 aa20.3■□□□□ 0.84
SHMT1P1-201ENST00000419974 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.84
SHMT1P1-201ENST00000419974 CFAP65Q6ZU64 1925 aaKnown RBP20.27■□□□□ 0.84
SHMT1P1-201ENST00000419974 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.83
SHMT1P1-201ENST00000419974 VGFO15240 615 aaPredicted RBP20.27■□□□□ 0.83
SHMT1P1-201ENST00000419974 THEMISQ8N1K5 641 aaPredicted RBP20.26■□□□□ 0.83
SHMT1P1-201ENST00000419974 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
SHMT1P1-201ENST00000419974 PPLO60437 1756 aa20.25■□□□□ 0.83
SHMT1P1-201ENST00000419974 LAMC1P11047 1609 aa20.24■□□□□ 0.83
SHMT1P1-201ENST00000419974 KDM2AQ9Y2K7 1162 aa20.24■□□□□ 0.83
SHMT1P1-201ENST00000419974 TRPM1Q7Z4N2 1603 aa20.23■□□□□ 0.83
SHMT1P1-201ENST00000419974 PIK3C2GO75747 1445 aa20.23■□□□□ 0.83
SHMT1P1-201ENST00000419974 ZNF316A6NFI3 1004 aaPredicted RBP20.23■□□□□ 0.83
SHMT1P1-201ENST00000419974 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
SHMT1P1-201ENST00000419974 LTBP4Q8N2S1 1624 aa20.21■□□□□ 0.83
SHMT1P1-201ENST00000419974 CHGAP10645 457 aaKnown RBP20.21■□□□□ 0.83
SHMT1P1-201ENST00000419974 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
SHMT1P1-201ENST00000419974 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.2■□□□□ 0.82
SHMT1P1-201ENST00000419974 ADGRF5Q8IZF2 1346 aa20.2■□□□□ 0.82
SHMT1P1-201ENST00000419974 EIF4G2P78344 907 aaKnown RBP eCLIP20.19■□□□□ 0.82
SHMT1P1-201ENST00000419974 ANKLE2Q86XL3 938 aa20.19■□□□□ 0.82
SHMT1P1-201ENST00000419974 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
SHMT1P1-201ENST00000419974 TMEM2Q9UHN6 1383 aa20.18■□□□□ 0.82
SHMT1P1-201ENST00000419974 IQSEC2Q5JU85 1478 aa20.18■□□□□ 0.82
SHMT1P1-201ENST00000419974 C14orf93Q9H972 538 aaKnown RBP20.18■□□□□ 0.82
SHMT1P1-201ENST00000419974 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
SHMT1P1-201ENST00000419974 SLIT1O75093 1534 aa20.18■□□□□ 0.82
SHMT1P1-201ENST00000419974 ROCK2O75116 1388 aaKnown RBP20.17■□□□□ 0.82
SHMT1P1-201ENST00000419974 ARHGAP23Q9P227 1491 aa20.17■□□□□ 0.82
SHMT1P1-201ENST00000419974 SETBP1Q9Y6X0 1596 aa20.17■□□□□ 0.82
SHMT1P1-201ENST00000419974 RIMS2Q9UQ26 1411 aa20.16■□□□□ 0.82
SHMT1P1-201ENST00000419974 CARD11Q9BXL7 1154 aa20.14■□□□□ 0.81
SHMT1P1-201ENST00000419974 MED14O60244 1454 aa20.14■□□□□ 0.81
SHMT1P1-201ENST00000419974 POLR1AO95602 1720 aaPredicted RBP20.14■□□□□ 0.81
SHMT1P1-201ENST00000419974 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
SHMT1P1-201ENST00000419974 NBPF1Q3BBV0 1214 aa20.12■□□□□ 0.81
SHMT1P1-201ENST00000419974 USP47Q96K76 1375 aa20.12■□□□□ 0.81
SHMT1P1-201ENST00000419974 ZNF335Q9H4Z2 1342 aaPredicted RBP20.12■□□□□ 0.81
SHMT1P1-201ENST00000419974 HSPA5P11021 654 aaKnown RBP20.1■□□□□ 0.81
SHMT1P1-201ENST00000419974 ADGRB1O14514 1584 aa20.1■□□□□ 0.81
SHMT1P1-201ENST00000419974 SCAF11Q99590 1463 aaKnown RBP20.1■□□□□ 0.81
SHMT1P1-201ENST00000419974 CFAP70Q5T0N1 1121 aa20.08■□□□□ 0.81
SHMT1P1-201ENST00000419974 SLC24A1O60721 1099 aa20.07■□□□□ 0.8
SHMT1P1-201ENST00000419974 NPHP4O75161 1426 aaPredicted RBP20.07■□□□□ 0.8
SHMT1P1-201ENST00000419974 PLEKHG1Q9ULL1 1385 aa20.07■□□□□ 0.8
SHMT1P1-201ENST00000419974 EID1Q9Y6B2 187 aa20.04■□□□□ 0.8
SHMT1P1-201ENST00000419974 IQGAP1P46940 1657 aa20.04■□□□□ 0.8
SHMT1P1-201ENST00000419974 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
SHMT1P1-201ENST00000419974 EIF3AQ14152 1382 aaKnown RBP20.03■□□□□ 0.8
SHMT1P1-201ENST00000419974 CPS1P31327 1500 aa20.02■□□□□ 0.8
SHMT1P1-201ENST00000419974 LTKP29376 864 aa20.02■□□□□ 0.79
SHMT1P1-201ENST00000419974 SBNO2Q9Y2G9 1366 aa20.01■□□□□ 0.79
SHMT1P1-201ENST00000419974 NRXN3Q9Y4C0 1643 aa20.01■□□□□ 0.79
SHMT1P1-201ENST00000419974 TXNDC2Q86VQ3 553 aa20.01■□□□□ 0.79
SHMT1P1-201ENST00000419974 ST20-MTHFSA0A0A6YYL1 179 aa20■□□□□ 0.79
SHMT1P1-201ENST00000419974 SIRT1Q96EB6 747 aa19.99■□□□□ 0.79
SHMT1P1-201ENST00000419974 TESK2Q96S53 571 aa19.99■□□□□ 0.79
SHMT1P1-201ENST00000419974 SETD1AO15047 1707 aaKnown RBP19.99■□□□□ 0.79
SHMT1P1-201ENST00000419974 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
SHMT1P1-201ENST00000419974 DIP2AQ14689 1571 aa19.98■□□□□ 0.79
SHMT1P1-201ENST00000419974 NUTM2DQ5VT03 806 aaPredicted RBP19.98■□□□□ 0.79
SHMT1P1-201ENST00000419974 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
SHMT1P1-201ENST00000419974 ABCC11Q96J66 1382 aa19.97■□□□□ 0.79
SHMT1P1-201ENST00000419974 TBX22Q9Y458 520 aa19.97■□□□□ 0.79
SHMT1P1-201ENST00000419974 DLC1Q96QB1 1528 aa19.96■□□□□ 0.79
SHMT1P1-201ENST00000419974 LRPPRCP42704 1394 aaKnown RBP19.95■□□□□ 0.78
SHMT1P1-201ENST00000419974 PIK3R4Q99570 1358 aa19.95■□□□□ 0.78
SHMT1P1-201ENST00000419974 TECPR2O15040 1411 aa19.95■□□□□ 0.78
SHMT1P1-201ENST00000419974 YTHDC2Q9H6S0 1430 aaKnown RBP19.95■□□□□ 0.78
SHMT1P1-201ENST00000419974 UBAP1LF5GYI3 381 aa19.94■□□□□ 0.78
SHMT1P1-201ENST00000419974 WASHC2AQ641Q2 1341 aa19.93■□□□□ 0.78
SHMT1P1-201ENST00000419974 CCDC7Q96M83 1385 aa19.92■□□□□ 0.78
SHMT1P1-201ENST00000419974 HIRIP3Q9BW71 556 aaPredicted RBP19.92■□□□□ 0.78
SHMT1P1-201ENST00000419974 TMEM132EQ6IEE7 984 aa19.91■□□□□ 0.78
SHMT1P1-201ENST00000419974 PUS7Q96PZ0 661 aaKnown RBP19.91■□□□□ 0.78
SHMT1P1-201ENST00000419974 C11orf95C9JLR9 678 aaPredicted RBP19.9■□□□□ 0.78
SHMT1P1-201ENST00000419974 METP08581 1390 aa19.9■□□□□ 0.78
SHMT1P1-201ENST00000419974 FAM135BQ49AJ0 1406 aa19.9■□□□□ 0.78
SHMT1P1-201ENST00000419974 TOM1O60784 492 aa19.89■□□□□ 0.77
SHMT1P1-201ENST00000419974 CDCA8Q53HL2 280 aa19.89■□□□□ 0.77
SHMT1P1-201ENST00000419974 KIF7Q2M1P5 1343 aa19.89■□□□□ 0.77
SHMT1P1-201ENST00000419974 CENPJQ9HC77 1338 aaPredicted RBP19.89■□□□□ 0.77
SHMT1P1-201ENST00000419974 TMF1P82094 1093 aa19.88■□□□□ 0.77
SHMT1P1-201ENST00000419974 KNDC1Q76NI1 1749 aa19.87■□□□□ 0.77
SHMT1P1-201ENST00000419974 TRAK1Q9UPV9 953 aa19.87■□□□□ 0.77
SHMT1P1-201ENST00000419974 STRCP1A6NGW2 1772 aa19.87■□□□□ 0.77
SHMT1P1-201ENST00000419974 ARHGEF28Q8N1W1 1705 aaKnown RBP19.86■□□□□ 0.77
SHMT1P1-201ENST00000419974 LRRC7Q96NW7 1537 aa19.86■□□□□ 0.77
SHMT1P1-201ENST00000419974 DIEXFQ68CQ4 756 aaKnown RBP19.86■□□□□ 0.77
SHMT1P1-201ENST00000419974 PTCH1Q13635 1447 aa19.83■□□□□ 0.76
SHMT1P1-201ENST00000419974 KCNA6P17658 529 aa19.81■□□□□ 0.76
SHMT1P1-201ENST00000419974 DISP3Q9P2K9 1392 aa19.81■□□□□ 0.76
SHMT1P1-201ENST00000419974 PTPRUQ92729 1446 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms