RNA–Protein interactions for RNA: ENST00000419784.1

LINC01945-201, Transcript of long intergenic non-protein coding RNA 1945, humanhuman

TSL 2 BASIC

Gene LINC01945, Length 840 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01945-201ENST00000419784 SWT1Q5T5J6 900 aaKnown RBP12.57□□□□□ -0.4
LINC01945-201ENST00000419784 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
LINC01945-201ENST00000419784 TMEM134Q9H6X4 195 aa12.57□□□□□ -0.4
LINC01945-201ENST00000419784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
LINC01945-201ENST00000419784 ITGBL1O95965 494 aaPredicted RBP12.55□□□□□ -0.4
LINC01945-201ENST00000419784 CCDC102AQ96A19 550 aa12.55□□□□□ -0.4
LINC01945-201ENST00000419784 HDGFP51858 240 aaKnown RBP12.54□□□□□ -0.4
LINC01945-201ENST00000419784 HPS5Q9UPZ3 1129 aa12.54□□□□□ -0.4
LINC01945-201ENST00000419784 WBP1LQ9NX94 342 aa12.53□□□□□ -0.4
LINC01945-201ENST00000419784 NYAP1Q6ZVC0 841 aa12.52□□□□□ -0.41
LINC01945-201ENST00000419784 TSR3Q9UJK0 312 aaKnown RBP12.52□□□□□ -0.41
LINC01945-201ENST00000419784 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
LINC01945-201ENST00000419784 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
LINC01945-201ENST00000419784 KRI1Q8N9T8 703 aaKnown RBP12.5□□□□□ -0.41
LINC01945-201ENST00000419784 RNF40O75150 1001 aa12.49□□□□□ -0.41
LINC01945-201ENST00000419784 PPP4CP60510 307 aa12.47□□□□□ -0.41
LINC01945-201ENST00000419784 DAXXQ9UER7 740 aaPredicted RBP12.45□□□□□ -0.42
LINC01945-201ENST00000419784 SLC4A3P48751 1232 aa12.44□□□□□ -0.42
LINC01945-201ENST00000419784 KCNC4Q03721 635 aa12.43□□□□□ -0.42
LINC01945-201ENST00000419784 SLC10A3P09131 477 aa12.42□□□□□ -0.42
LINC01945-201ENST00000419784 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
LINC01945-201ENST00000419784 MDM2Q00987 491 aaPredicted RBP12.41□□□□□ -0.42
LINC01945-201ENST00000419784 APLP1P51693 650 aa12.4□□□□□ -0.42
LINC01945-201ENST00000419784 SLC24A3Q9HC58 644 aa12.4□□□□□ -0.42
LINC01945-201ENST00000419784 AK7Q96M32 723 aa12.39□□□□□ -0.43
LINC01945-201ENST00000419784 TRIM66O15016 1216 aa12.38□□□□□ -0.43
LINC01945-201ENST00000419784 AMHR2Q16671 573 aa12.38□□□□□ -0.43
LINC01945-201ENST00000419784 TMUB1Q9BVT8 246 aa12.38□□□□□ -0.43
LINC01945-201ENST00000419784 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
LINC01945-201ENST00000419784 CFHP08603 1231 aa12.36□□□□□ -0.43
LINC01945-201ENST00000419784 CLCN1P35523 988 aa12.36□□□□□ -0.43
LINC01945-201ENST00000419784 REPIN1Q9BWE0 567 aaKnown RBP12.36□□□□□ -0.43
LINC01945-201ENST00000419784 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
LINC01945-201ENST00000419784 SULF1Q8IWU6 871 aa12.35□□□□□ -0.43
LINC01945-201ENST00000419784 Q6ZNB5 142 aa12.34□□□□□ -0.43
LINC01945-201ENST00000419784 RDH13Q8NBN7 331 aa12.34□□□□□ -0.43
LINC01945-201ENST00000419784 RSPH4AQ5TD94 716 aa12.33□□□□□ -0.44
LINC01945-201ENST00000419784 PRR14Q9BWN1 585 aa12.33□□□□□ -0.44
LINC01945-201ENST00000419784 FAM217BQ9NTX9 383 aaPredicted RBP12.32□□□□□ -0.44
LINC01945-201ENST00000419784 TTLL12Q14166 644 aaPredicted RBP12.31□□□□□ -0.44
LINC01945-201ENST00000419784 KMT5BQ4FZB7 885 aa12.31□□□□□ -0.44
LINC01945-201ENST00000419784 ACTN4O43707 911 aaKnown RBP12.3□□□□□ -0.44
LINC01945-201ENST00000419784 CD46P15529 392 aa12.3□□□□□ -0.44
LINC01945-201ENST00000419784 TPRNQ4KMQ1 711 aa12.29□□□□□ -0.44
LINC01945-201ENST00000419784 TJAP1Q5JTD0 557 aa12.29□□□□□ -0.44
LINC01945-201ENST00000419784 PARP9Q8IXQ6 854 aa12.29□□□□□ -0.44
LINC01945-201ENST00000419784 MTRQ99707 1265 aa12.29□□□□□ -0.44
LINC01945-201ENST00000419784 GCGRP47871 477 aa12.28□□□□□ -0.44
LINC01945-201ENST00000419784 PDE4DQ08499 809 aa12.28□□□□□ -0.44
LINC01945-201ENST00000419784 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
LINC01945-201ENST00000419784 PCDHB3Q9Y5E6 796 aa12.27□□□□□ -0.45
LINC01945-201ENST00000419784 SSTR3P32745 418 aaPredicted RBP12.25□□□□□ -0.45
LINC01945-201ENST00000419784 LAPTM4AQ15012 233 aa12.25□□□□□ -0.45
LINC01945-201ENST00000419784 BLOC1S3Q6QNY0 202 aa12.24□□□□□ -0.45
LINC01945-201ENST00000419784 IL21Q9HBE4 155 aa12.24□□□□□ -0.45
LINC01945-201ENST00000419784 COPS2P61201 443 aa12.23□□□□□ -0.45
LINC01945-201ENST00000419784 FUT2Q10981 343 aa12.23□□□□□ -0.45
LINC01945-201ENST00000419784 ZNF516Q92618 1163 aa12.22□□□□□ -0.45
LINC01945-201ENST00000419784 MS4A1P11836 297 aa12.2□□□□□ -0.46
LINC01945-201ENST00000419784 PUS10Q3MIT2 529 aaKnown RBP12.2□□□□□ -0.46
LINC01945-201ENST00000419784 GFRA3O60609 400 aa12.18□□□□□ -0.46
LINC01945-201ENST00000419784 KDM4AO75164 1064 aa12.18□□□□□ -0.46
LINC01945-201ENST00000419784 ZPR1O75312 459 aa12.18□□□□□ -0.46
LINC01945-201ENST00000419784 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
LINC01945-201ENST00000419784 MORN1Q5T089 497 aa12.18□□□□□ -0.46
LINC01945-201ENST00000419784 NR1I2O75469 434 aa12.15□□□□□ -0.46
LINC01945-201ENST00000419784 SCUBE3Q8IX30 993 aa12.15□□□□□ -0.46
LINC01945-201ENST00000419784 BEGAINQ9BUH8 593 aa12.15□□□□□ -0.46
LINC01945-201ENST00000419784 TLL1O43897 1013 aa12.14□□□□□ -0.47
LINC01945-201ENST00000419784 USP46P62068 366 aa12.14□□□□□ -0.47
LINC01945-201ENST00000419784 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
LINC01945-201ENST00000419784 PRKD2Q9BZL6 878 aa12.14□□□□□ -0.47
LINC01945-201ENST00000419784 HOXA2O43364 376 aa12.13□□□□□ -0.47
LINC01945-201ENST00000419784 PRKCSHP14314 528 aaPredicted RBP12.13□□□□□ -0.47
LINC01945-201ENST00000419784 PPP1R18Q6NYC8 613 aa12.13□□□□□ -0.47
LINC01945-201ENST00000419784 GPBP1L1Q9HC44 474 aaPredicted RBP12.13□□□□□ -0.47
LINC01945-201ENST00000419784 SLC27A5Q9Y2P5 690 aa12.13□□□□□ -0.47
LINC01945-201ENST00000419784 LCE2BO14633 110 aa12.12□□□□□ -0.47
LINC01945-201ENST00000419784 GRIPAP1Q4V328 841 aa12.12□□□□□ -0.47
LINC01945-201ENST00000419784 TRAF7Q6Q0C0 670 aa12.12□□□□□ -0.47
LINC01945-201ENST00000419784 NUTM1Q86Y26 1132 aa12.12□□□□□ -0.47
LINC01945-201ENST00000419784 SPIRE2Q8WWL2 714 aa12.12□□□□□ -0.47
LINC01945-201ENST00000419784 HLA-CQ95604 372 aa12.11□□□□□ -0.47
LINC01945-201ENST00000419784 KDM4CQ9H3R0 1056 aa12.11□□□□□ -0.47
LINC01945-201ENST00000419784 V9GY48 417 aaPredicted RBP12.1□□□□□ -0.47
LINC01945-201ENST00000419784 NRG2O14511 850 aaPredicted RBP12.09□□□□□ -0.47
LINC01945-201ENST00000419784 THAP11Q96EK4 314 aa12.09□□□□□ -0.47
LINC01945-201ENST00000419784 ADH1BP00325 375 aa12.07□□□□□ -0.48
LINC01945-201ENST00000419784 GUCA2AQ02747 115 aa12.07□□□□□ -0.48
LINC01945-201ENST00000419784 TBC1D2Q9BYX2 928 aa12.07□□□□□ -0.48
LINC01945-201ENST00000419784 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.06□□□□□ -0.48
LINC01945-201ENST00000419784 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
LINC01945-201ENST00000419784 BRICD5Q6PL45 260 aa12.05□□□□□ -0.48
LINC01945-201ENST00000419784 RNF19BQ6ZMZ0 732 aa12.05□□□□□ -0.48
LINC01945-201ENST00000419784 SPSB2Q99619 263 aa12.05□□□□□ -0.48
LINC01945-201ENST00000419784 MOXD2PA6NHM9 499 aa12.04□□□□□ -0.48
LINC01945-201ENST00000419784 FMNL1O95466 1100 aaPredicted RBP12.03□□□□□ -0.48
LINC01945-201ENST00000419784 NDUFV2P19404 249 aa12.03□□□□□ -0.48
LINC01945-201ENST00000419784 BRPF1P55201 1214 aaPredicted RBP12.03□□□□□ -0.48
LINC01945-201ENST00000419784 DIXDC1Q155Q3 683 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms