RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 KIF15Q9NS87 1388 aa24.1■■□□□ 1.45
PTPA-213ENST00000419582 KANK1Q14678 1352 aa24.09■■□□□ 1.45
PTPA-213ENST00000419582 NOS1P29475 1434 aa24.09■■□□□ 1.45
PTPA-213ENST00000419582 CADPS2Q86UW7 1296 aa24.06■■□□□ 1.44
PTPA-213ENST00000419582 TBX22Q9Y458 520 aa24.06■■□□□ 1.44
PTPA-213ENST00000419582 AHDC1Q5TGY3 1603 aaPredicted RBP24.06■■□□□ 1.44
PTPA-213ENST00000419582 PLEKHG1Q9ULL1 1385 aa24.05■■□□□ 1.44
PTPA-213ENST00000419582 HDGFP51858 240 aaKnown RBP24.04■■□□□ 1.44
PTPA-213ENST00000419582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.04■■□□□ 1.44
PTPA-213ENST00000419582 C19orf44Q9H6X5 657 aa24.04■■□□□ 1.44
PTPA-213ENST00000419582 SHPRHQ149N8 1683 aa24.04■■□□□ 1.44
PTPA-213ENST00000419582 CHD2O14647 1828 aaKnown RBP24.03■■□□□ 1.44
PTPA-213ENST00000419582 ADGRB3O60242 1522 aa24.03■■□□□ 1.44
PTPA-213ENST00000419582 RRP7BPQ9NSQ0 103 aa24.02■■□□□ 1.44
PTPA-213ENST00000419582 ZFYVE9O95405 1425 aa24.01■■□□□ 1.43
PTPA-213ENST00000419582 BCANQ96GW7 911 aa24■■□□□ 1.43
PTPA-213ENST00000419582 ABCC5O15440 1437 aa23.99■■□□□ 1.43
PTPA-213ENST00000419582 ATF3P18847 181 aa23.97■■□□□ 1.43
PTPA-213ENST00000419582 PIK3R4Q99570 1358 aa23.97■■□□□ 1.43
PTPA-213ENST00000419582 DIP2AQ14689 1571 aa23.95■■□□□ 1.42
PTPA-213ENST00000419582 AFF2P51816 1311 aa23.94■■□□□ 1.42
PTPA-213ENST00000419582 RBM6P78332 1123 aaKnown RBP23.94■■□□□ 1.42
PTPA-213ENST00000419582 BRINP3Q76B58 766 aa23.94■■□□□ 1.42
PTPA-213ENST00000419582 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
PTPA-213ENST00000419582 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.93■■□□□ 1.42
PTPA-213ENST00000419582 RPRD2Q5VT52 1461 aaKnown RBP23.93■■□□□ 1.42
PTPA-213ENST00000419582 RIMS2Q9UQ26 1411 aa23.92■■□□□ 1.42
PTPA-213ENST00000419582 KANK4Q5T7N3 995 aaPredicted RBP23.91■■□□□ 1.42
PTPA-213ENST00000419582 C14orf37Q86TY3 774 aa23.91■■□□□ 1.42
PTPA-213ENST00000419582 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.9■■□□□ 1.42
PTPA-213ENST00000419582 QTRT2Q9H974 415 aaKnown RBP23.9■■□□□ 1.42
PTPA-213ENST00000419582 PPP1R15AO75807 674 aaPredicted RBP23.89■■□□□ 1.41
PTPA-213ENST00000419582 FOXD1Q16676 465 aa23.89■■□□□ 1.41
PTPA-213ENST00000419582 DCCP43146 1447 aa23.89■■□□□ 1.41
PTPA-213ENST00000419582 RGS12O14924 1447 aa23.88■■□□□ 1.41
PTPA-213ENST00000419582 ADAMTS13Q76LX8 1427 aa23.88■■□□□ 1.41
PTPA-213ENST00000419582 NUTM2BA6NNL0 878 aaPredicted RBP23.88■■□□□ 1.41
PTPA-213ENST00000419582 NUTM2EB1AL46 878 aaPredicted RBP23.88■■□□□ 1.41
PTPA-213ENST00000419582 NUTM2AQ8IVF1 878 aaPredicted RBP23.88■■□□□ 1.41
PTPA-213ENST00000419582 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
PTPA-213ENST00000419582 ANKRD30AQ9BXX3 1397 aa23.88■■□□□ 1.41
PTPA-213ENST00000419582 CROCC2H7BZ55 1655 aa23.86■■□□□ 1.41
PTPA-213ENST00000419582 DAPK1P53355 1430 aa23.86■■□□□ 1.41
PTPA-213ENST00000419582 VPS8Q8N3P4 1428 aa23.85■■□□□ 1.41
PTPA-213ENST00000419582 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
PTPA-213ENST00000419582 TMEM131LA2VDJ0 1609 aa23.82■■□□□ 1.4
PTPA-213ENST00000419582 ZRANB1Q9UGI0 708 aa23.81■■□□□ 1.4
PTPA-213ENST00000419582 ATAD2Q6PL18 1390 aa23.8■■□□□ 1.4
PTPA-213ENST00000419582 AMOTL2Q9Y2J4 779 aa23.8■■□□□ 1.4
PTPA-213ENST00000419582 ASXL1Q8IXJ9 1541 aa23.79■■□□□ 1.4
PTPA-213ENST00000419582 NUTM2DQ5VT03 806 aaPredicted RBP23.79■■□□□ 1.4
PTPA-213ENST00000419582 C8orf37Q96NL8 207 aa23.78■■□□□ 1.4
PTPA-213ENST00000419582 EP400Q96L91 3159 aa23.77■■□□□ 1.4
PTPA-213ENST00000419582 PTPN23Q9H3S7 1636 aa23.77■■□□□ 1.4
PTPA-213ENST00000419582 CCDC125Q86Z20 511 aa23.76■■□□□ 1.39
PTPA-213ENST00000419582 PNPLA6Q8IY17 1366 aa23.76■■□□□ 1.39
PTPA-213ENST00000419582 MST1RQ04912 1400 aa23.76■■□□□ 1.39
PTPA-213ENST00000419582 NHSL1Q5SYE7 1610 aa23.75■■□□□ 1.39
PTPA-213ENST00000419582 PTPRUQ92729 1446 aa23.75■■□□□ 1.39
PTPA-213ENST00000419582 CHIC2Q9UKJ5 165 aa23.74■■□□□ 1.39
PTPA-213ENST00000419582 TRPM2O94759 1503 aa23.74■■□□□ 1.39
PTPA-213ENST00000419582 MYO5BQ9ULV0 1848 aa23.73■■□□□ 1.39
PTPA-213ENST00000419582 ADGRL2O95490 1459 aa23.73■■□□□ 1.39
PTPA-213ENST00000419582 GCC2Q8IWJ2 1684 aa23.73■■□□□ 1.39
PTPA-213ENST00000419582 FNBP4Q8N3X1 1017 aaPredicted RBP23.7■■□□□ 1.38
PTPA-213ENST00000419582 TRPC5Q9UL62 973 aaPredicted RBP23.69■■□□□ 1.38
PTPA-213ENST00000419582 ANKRD50Q9ULJ7 1429 aa23.67■■□□□ 1.38
PTPA-213ENST00000419582 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
PTPA-213ENST00000419582 USP21Q9UK80 565 aa23.65■■□□□ 1.38
PTPA-213ENST00000419582 SETBP1Q9Y6X0 1596 aa23.64■■□□□ 1.37
PTPA-213ENST00000419582 PTCH1Q13635 1447 aa23.63■■□□□ 1.37
PTPA-213ENST00000419582 XRN1Q8IZH2 1706 aaKnown RBP23.63■■□□□ 1.37
PTPA-213ENST00000419582 UNC13BO14795 1591 aa23.62■■□□□ 1.37
PTPA-213ENST00000419582 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
PTPA-213ENST00000419582 SOS2Q07890 1332 aaPredicted RBP23.61■■□□□ 1.37
PTPA-213ENST00000419582 ATRNO75882 1429 aa23.61■■□□□ 1.37
PTPA-213ENST00000419582 ADGRL3Q9HAR2 1447 aa23.61■■□□□ 1.37
PTPA-213ENST00000419582 DDX17Q92841 729 aaKnown RBP23.61■■□□□ 1.37
PTPA-213ENST00000419582 LAMC1P11047 1609 aa23.61■■□□□ 1.37
PTPA-213ENST00000419582 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
PTPA-213ENST00000419582 METP08581 1390 aa23.55■■□□□ 1.36
PTPA-213ENST00000419582 NRXN3Q9Y4C0 1643 aa23.54■■□□□ 1.36
PTPA-213ENST00000419582 E9PCH4 1651 aa23.52■■□□□ 1.36
PTPA-213ENST00000419582 BCL9LQ86UU0 1499 aa23.51■■□□□ 1.35
PTPA-213ENST00000419582 APLP2Q06481 763 aa23.51■■□□□ 1.35
PTPA-213ENST00000419582 GJD4Q96KN9 370 aaPredicted RBP23.49■■□□□ 1.35
PTPA-213ENST00000419582 BLMP54132 1417 aaPredicted RBP23.48■■□□□ 1.35
PTPA-213ENST00000419582 COL22A1Q8NFW1 1626 aaPredicted RBP23.48■■□□□ 1.35
PTPA-213ENST00000419582 ORAI2Q96SN7 254 aa23.47■■□□□ 1.35
PTPA-213ENST00000419582 IQGAP3Q86VI3 1631 aa23.47■■□□□ 1.35
PTPA-213ENST00000419582 MYOM2P54296 1465 aa23.46■■□□□ 1.35
PTPA-213ENST00000419582 NALCNQ8IZF0 1738 aa23.45■■□□□ 1.34
PTPA-213ENST00000419582 PRAG1Q86YV5 1406 aa23.42■■□□□ 1.34
PTPA-213ENST00000419582 LRP5O75197 1615 aa23.41■■□□□ 1.34
PTPA-213ENST00000419582 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
PTPA-213ENST00000419582 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
PTPA-213ENST00000419582 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
PTPA-213ENST00000419582 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
PTPA-213ENST00000419582 NUP155O75694 1391 aa23.39■■□□□ 1.33
PTPA-213ENST00000419582 ZNF326Q5BKZ1 582 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms