RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 ZMYM3Q14202 1370 aa18.36■□□□□ 0.53
SFTPA1-202ENST00000419470 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
SFTPA1-202ENST00000419470 FER1L4A9Z1Z3 1794 aa18.35■□□□□ 0.53
SFTPA1-202ENST00000419470 IDI1Q13907 227 aa18.34■□□□□ 0.53
SFTPA1-202ENST00000419470 PPLO60437 1756 aa18.34■□□□□ 0.53
SFTPA1-202ENST00000419470 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
SFTPA1-202ENST00000419470 EIF4G2P78344 907 aaKnown RBP eCLIP18.34■□□□□ 0.53
SFTPA1-202ENST00000419470 MYOM2P54296 1465 aa18.33■□□□□ 0.53
SFTPA1-202ENST00000419470 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.53
SFTPA1-202ENST00000419470 TMEM131LA2VDJ0 1609 aa18.33■□□□□ 0.52
SFTPA1-202ENST00000419470 HSPA5P11021 654 aaKnown RBP18.32■□□□□ 0.52
SFTPA1-202ENST00000419470 CHGAP10645 457 aaKnown RBP18.31■□□□□ 0.52
SFTPA1-202ENST00000419470 LAMC1P11047 1609 aa18.3■□□□□ 0.52
SFTPA1-202ENST00000419470 ROCK2O75116 1388 aaKnown RBP18.29■□□□□ 0.52
SFTPA1-202ENST00000419470 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
SFTPA1-202ENST00000419470 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
SFTPA1-202ENST00000419470 C3P01024 1663 aa18.29■□□□□ 0.52
SFTPA1-202ENST00000419470 KIAA1210Q9ULL0 1709 aa18.29■□□□□ 0.52
SFTPA1-202ENST00000419470 NRXN1Q9ULB1 1477 aa18.29■□□□□ 0.52
SFTPA1-202ENST00000419470 CARD11Q9BXL7 1154 aa18.28■□□□□ 0.52
SFTPA1-202ENST00000419470 USP47Q96K76 1375 aa18.28■□□□□ 0.52
SFTPA1-202ENST00000419470 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
SFTPA1-202ENST00000419470 NBPF1Q3BBV0 1214 aa18.27■□□□□ 0.52
SFTPA1-202ENST00000419470 ADGRF5Q8IZF2 1346 aa18.26■□□□□ 0.51
SFTPA1-202ENST00000419470 TNRQ92752 1358 aa18.24■□□□□ 0.51
SFTPA1-202ENST00000419470 ADAMTSL3P82987 1691 aa18.23■□□□□ 0.51
SFTPA1-202ENST00000419470 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
SFTPA1-202ENST00000419470 A2ML1A8K2U0 1454 aa18.22■□□□□ 0.51
SFTPA1-202ENST00000419470 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
SFTPA1-202ENST00000419470 KDM5AP29375 1690 aaKnown RBP18.22■□□□□ 0.51
SFTPA1-202ENST00000419470 ZFYVE9O95405 1425 aa18.21■□□□□ 0.51
SFTPA1-202ENST00000419470 RIMS1Q86UR5 1692 aaKnown RBP18.21■□□□□ 0.51
SFTPA1-202ENST00000419470 CCER2I3L3R5 266 aa18.21■□□□□ 0.5
SFTPA1-202ENST00000419470 CEBPAP49715 358 aaPredicted RBP18.21■□□□□ 0.5
SFTPA1-202ENST00000419470 IQGAP1P46940 1657 aa18.2■□□□□ 0.5
SFTPA1-202ENST00000419470 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
SFTPA1-202ENST00000419470 DEKP35659 375 aaKnown RBP18.19■□□□□ 0.5
SFTPA1-202ENST00000419470 STAG3Q9UJ98 1225 aa18.19■□□□□ 0.5
SFTPA1-202ENST00000419470 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
SFTPA1-202ENST00000419470 CFAP70Q5T0N1 1121 aa18.18■□□□□ 0.5
SFTPA1-202ENST00000419470 NLRP1Q9C000 1473 aa18.17■□□□□ 0.5
SFTPA1-202ENST00000419470 WASHC2AQ641Q2 1341 aa18.17■□□□□ 0.5
SFTPA1-202ENST00000419470 SETBP1Q9Y6X0 1596 aa18.17■□□□□ 0.5
SFTPA1-202ENST00000419470 ST20-MTHFSA0A0A6YYL1 179 aa18.16■□□□□ 0.5
SFTPA1-202ENST00000419470 C11orf95C9JLR9 678 aaPredicted RBP18.16■□□□□ 0.5
SFTPA1-202ENST00000419470 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
SFTPA1-202ENST00000419470 C14orf93Q9H972 538 aaKnown RBP18.15■□□□□ 0.5
SFTPA1-202ENST00000419470 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.5
SFTPA1-202ENST00000419470 DDX10Q13206 875 aaKnown RBP18.14■□□□□ 0.49
SFTPA1-202ENST00000419470 CCDC7Q96M83 1385 aa18.14■□□□□ 0.49
SFTPA1-202ENST00000419470 RIMS2Q9UQ26 1411 aa18.13■□□□□ 0.49
SFTPA1-202ENST00000419470 ADGRB1O14514 1584 aa18.13■□□□□ 0.49
SFTPA1-202ENST00000419470 MYO3AQ8NEV4 1616 aa18.11■□□□□ 0.49
SFTPA1-202ENST00000419470 KIF7Q2M1P5 1343 aa18.11■□□□□ 0.49
SFTPA1-202ENST00000419470 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
SFTPA1-202ENST00000419470 ERICH6BQ5W0A0 696 aa18.09■□□□□ 0.49
SFTPA1-202ENST00000419470 SETD1BQ9UPS6 1966 aaKnown RBP18.09■□□□□ 0.49
SFTPA1-202ENST00000419470 TESK2Q96S53 571 aa18.08■□□□□ 0.49
SFTPA1-202ENST00000419470 TMEM2Q9UHN6 1383 aa18.08■□□□□ 0.49
SFTPA1-202ENST00000419470 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
SFTPA1-202ENST00000419470 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.07■□□□□ 0.48
SFTPA1-202ENST00000419470 ALKQ9UM73 1620 aa18.07■□□□□ 0.48
SFTPA1-202ENST00000419470 ASXL1Q8IXJ9 1541 aa18.06■□□□□ 0.48
SFTPA1-202ENST00000419470 ANP32CO43423 234 aa18.06■□□□□ 0.48
SFTPA1-202ENST00000419470 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
SFTPA1-202ENST00000419470 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
SFTPA1-202ENST00000419470 TMEM132EQ6IEE7 984 aa18.05■□□□□ 0.48
SFTPA1-202ENST00000419470 CEP170BQ9Y4F5 1589 aaPredicted RBP18.05■□□□□ 0.48
SFTPA1-202ENST00000419470 SLIT1O75093 1534 aa18.04■□□□□ 0.48
SFTPA1-202ENST00000419470 HDGFP51858 240 aaKnown RBP18.04■□□□□ 0.48
SFTPA1-202ENST00000419470 ARHGAP23Q9P227 1491 aa18.04■□□□□ 0.48
SFTPA1-202ENST00000419470 ZNF142P52746 1687 aaPredicted RBP18.03■□□□□ 0.48
SFTPA1-202ENST00000419470 ARHGEF28Q8N1W1 1705 aaKnown RBP18.03■□□□□ 0.48
SFTPA1-202ENST00000419470 PTPRMP28827 1452 aa18.03■□□□□ 0.48
SFTPA1-202ENST00000419470 DISP3Q9P2K9 1392 aa18.01■□□□□ 0.47
SFTPA1-202ENST00000419470 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
SFTPA1-202ENST00000419470 THEMISQ8N1K5 641 aaPredicted RBP18■□□□□ 0.47
SFTPA1-202ENST00000419470 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
SFTPA1-202ENST00000419470 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
SFTPA1-202ENST00000419470 TMF1P82094 1093 aa17.99■□□□□ 0.47
SFTPA1-202ENST00000419470 QRICH2Q9H0J4 1663 aa17.99■□□□□ 0.47
SFTPA1-202ENST00000419470 LTKP29376 864 aa17.98■□□□□ 0.47
SFTPA1-202ENST00000419470 SBNO2Q9Y2G9 1366 aa17.98■□□□□ 0.47
SFTPA1-202ENST00000419470 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
SFTPA1-202ENST00000419470 PLEKHG1Q9ULL1 1385 aa17.97■□□□□ 0.47
SFTPA1-202ENST00000419470 CENPJQ9HC77 1338 aaPredicted RBP17.97■□□□□ 0.47
SFTPA1-202ENST00000419470 POLR3GLQ9BT43 218 aa17.97■□□□□ 0.47
SFTPA1-202ENST00000419470 TXNDC2Q86VQ3 553 aa17.96■□□□□ 0.47
SFTPA1-202ENST00000419470 SLC24A1O60721 1099 aa17.95■□□□□ 0.46
SFTPA1-202ENST00000419470 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
SFTPA1-202ENST00000419470 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
SFTPA1-202ENST00000419470 ADAMTS13Q76LX8 1427 aa17.95■□□□□ 0.46
SFTPA1-202ENST00000419470 PPP4R2Q9NY27 417 aa17.94■□□□□ 0.46
SFTPA1-202ENST00000419470 METP08581 1390 aa17.93■□□□□ 0.46
SFTPA1-202ENST00000419470 STK26Q9P289 416 aa17.92■□□□□ 0.46
SFTPA1-202ENST00000419470 LRPPRCP42704 1394 aaKnown RBP17.92■□□□□ 0.46
SFTPA1-202ENST00000419470 MED14O60244 1454 aa17.92■□□□□ 0.46
SFTPA1-202ENST00000419470 DLC1Q96QB1 1528 aa17.92■□□□□ 0.46
SFTPA1-202ENST00000419470 CDCA8Q53HL2 280 aa17.91■□□□□ 0.46
SFTPA1-202ENST00000419470 KNDC1Q76NI1 1749 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms