RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 CAMSAP2Q08AD1 1489 aa10.19□□□□□ -0.78
LINC02539-202ENST00000419220 RTEL1-TNFRSF6BF6WH68 1400 aa10.19□□□□□ -0.78
LINC02539-202ENST00000419220 HECW2Q9P2P5 1572 aa10.18□□□□□ -0.78
LINC02539-202ENST00000419220 SYCP2Q9BX26 1530 aa10.18□□□□□ -0.78
LINC02539-202ENST00000419220 CCDC141Q6ZP82 1450 aa10.18□□□□□ -0.78
LINC02539-202ENST00000419220 FGD6Q6ZV73 1430 aa10.18□□□□□ -0.78
LINC02539-202ENST00000419220 PYGBP11216 843 aa10.18□□□□□ -0.78
LINC02539-202ENST00000419220 PLCB2Q00722 1185 aa10.18□□□□□ -0.78
LINC02539-202ENST00000419220 DCAF8Q5TAQ9 597 aa10.18□□□□□ -0.78
LINC02539-202ENST00000419220 C9orf84Q5VXU9 1444 aa10.17□□□□□ -0.78
LINC02539-202ENST00000419220 PCDHB8Q9UN66 801 aa10.17□□□□□ -0.78
LINC02539-202ENST00000419220 PTPN23Q9H3S7 1636 aa10.17□□□□□ -0.78
LINC02539-202ENST00000419220 KDM5CP41229 1560 aa10.17□□□□□ -0.78
LINC02539-202ENST00000419220 ARHGEF5Q12774 1597 aa10.17□□□□□ -0.78
LINC02539-202ENST00000419220 TRAPPC8Q9Y2L5 1435 aa10.16□□□□□ -0.78
LINC02539-202ENST00000419220 ZNF644Q9H582 1327 aaPredicted RBP10.16□□□□□ -0.78
LINC02539-202ENST00000419220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.15□□□□□ -0.78
LINC02539-202ENST00000419220 ARHGEF40Q8TER5 1519 aa10.15□□□□□ -0.78
LINC02539-202ENST00000419220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC02539-202ENST00000419220 ATP7AQ04656 1500 aa10.14□□□□□ -0.79
LINC02539-202ENST00000419220 ZNF467Q7Z7K2 595 aaPredicted RBP10.14□□□□□ -0.79
LINC02539-202ENST00000419220 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
LINC02539-202ENST00000419220 ZNF710Q8N1W2 664 aa10.14□□□□□ -0.79
LINC02539-202ENST00000419220 ADGBQ8N7X0 1667 aa10.14□□□□□ -0.79
LINC02539-202ENST00000419220 FRMPD1Q5SYB0 1578 aa10.14□□□□□ -0.79
LINC02539-202ENST00000419220 ANKRD30AQ9BXX3 1397 aa10.14□□□□□ -0.79
LINC02539-202ENST00000419220 ERBB3P21860 1342 aa10.13□□□□□ -0.79
LINC02539-202ENST00000419220 ACIN1Q9UKV3 1341 aaKnown RBP10.13□□□□□ -0.79
LINC02539-202ENST00000419220 TCOF1Q13428 1488 aaKnown RBP10.13□□□□□ -0.79
LINC02539-202ENST00000419220 MBD5Q9P267 1494 aa10.13□□□□□ -0.79
LINC02539-202ENST00000419220 HOXB1P14653 301 aaPredicted RBP10.13□□□□□ -0.79
LINC02539-202ENST00000419220 ARHGEF12Q9NZN5 1544 aa10.12□□□□□ -0.79
LINC02539-202ENST00000419220 G3V3G9 751 aa10.12□□□□□ -0.79
LINC02539-202ENST00000419220 GSE1Q14687 1217 aa10.12□□□□□ -0.79
LINC02539-202ENST00000419220 REREQ9P2R6 1566 aa10.12□□□□□ -0.79
LINC02539-202ENST00000419220 SHANK2Q9UPX8 1470 aa10.11□□□□□ -0.79
LINC02539-202ENST00000419220 PTGER2P43116 358 aa10.11□□□□□ -0.79
LINC02539-202ENST00000419220 DHX29Q7Z478 1369 aaKnown RBP10.11□□□□□ -0.79
LINC02539-202ENST00000419220 KIDINS220Q9ULH0 1771 aa10.11□□□□□ -0.79
LINC02539-202ENST00000419220 A2MP01023 1474 aa10.1□□□□□ -0.79
LINC02539-202ENST00000419220 DAPK1P53355 1430 aa10.1□□□□□ -0.79
LINC02539-202ENST00000419220 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
LINC02539-202ENST00000419220 HAP1P54257 671 aaPredicted RBP10.1□□□□□ -0.79
LINC02539-202ENST00000419220 MLECQ14165 292 aa10.1□□□□□ -0.79
LINC02539-202ENST00000419220 DNMT1P26358 1616 aaKnown RBP10.1□□□□□ -0.79
LINC02539-202ENST00000419220 MAST1Q9Y2H9 1570 aa10.09□□□□□ -0.79
LINC02539-202ENST00000419220 AGLP35573 1532 aa10.09□□□□□ -0.79
LINC02539-202ENST00000419220 DOK7Q18PE1 504 aa10.09□□□□□ -0.79
LINC02539-202ENST00000419220 INO80Q9ULG1 1556 aaPredicted RBP10.09□□□□□ -0.79
LINC02539-202ENST00000419220 DIP2CQ9Y2E4 1556 aa10.09□□□□□ -0.79
LINC02539-202ENST00000419220 CNTLNQ9NXG0 1405 aa10.08□□□□□ -0.8
LINC02539-202ENST00000419220 KIF3BO15066 747 aa10.08□□□□□ -0.8
LINC02539-202ENST00000419220 CHGAP10645 457 aaKnown RBP10.08□□□□□ -0.8
LINC02539-202ENST00000419220 HOXB3P14651 431 aaPredicted RBP10.08□□□□□ -0.8
LINC02539-202ENST00000419220 ITGAEP38570 1179 aa10.08□□□□□ -0.8
LINC02539-202ENST00000419220 GGT6Q6P531 493 aa10.08□□□□□ -0.8
LINC02539-202ENST00000419220 RRP7BPQ9NSQ0 103 aa10.08□□□□□ -0.8
LINC02539-202ENST00000419220 CHIC2Q9UKJ5 165 aa10.08□□□□□ -0.8
LINC02539-202ENST00000419220 KANK1Q14678 1352 aa10.08□□□□□ -0.8
LINC02539-202ENST00000419220 ABCC5O15440 1437 aa10.07□□□□□ -0.8
LINC02539-202ENST00000419220 DUOX2Q9NRD8 1548 aa10.07□□□□□ -0.8
LINC02539-202ENST00000419220 RIMBP2O15034 1052 aa10.07□□□□□ -0.8
LINC02539-202ENST00000419220 RNF25Q96BH1 459 aaPredicted RBP10.07□□□□□ -0.8
LINC02539-202ENST00000419220 BCORL1Q5H9F3 1711 aa10.07□□□□□ -0.8
LINC02539-202ENST00000419220 ABCA6Q8N139 1617 aa10.07□□□□□ -0.8
LINC02539-202ENST00000419220 RRBP1Q9P2E9 1410 aaKnown RBP10.07□□□□□ -0.8
LINC02539-202ENST00000419220 WASHC2CQ9Y4E1 1318 aa10.07□□□□□ -0.8
LINC02539-202ENST00000419220 CROCC2H7BZ55 1655 aa10.06□□□□□ -0.8
LINC02539-202ENST00000419220 PLXNC1O60486 1568 aa10.06□□□□□ -0.8
LINC02539-202ENST00000419220 KIF15Q9NS87 1388 aa10.06□□□□□ -0.8
LINC02539-202ENST00000419220 BBXQ8WY36 941 aaPredicted RBP10.06□□□□□ -0.8
LINC02539-202ENST00000419220 ROCK1Q13464 1354 aa10.05□□□□□ -0.8
LINC02539-202ENST00000419220 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.05□□□□□ -0.8
LINC02539-202ENST00000419220 ERBINQ96RT1 1412 aa10.05□□□□□ -0.8
LINC02539-202ENST00000419220 FAM135AQ9P2D6 1515 aa10.04□□□□□ -0.8
LINC02539-202ENST00000419220 KDM4FA0A1W2PPD8 638 aa10.04□□□□□ -0.8
LINC02539-202ENST00000419220 PAXIP1Q6ZW49 1069 aaPredicted RBP10.04□□□□□ -0.8
LINC02539-202ENST00000419220 NCOA1Q15788 1441 aa10.04□□□□□ -0.8
LINC02539-202ENST00000419220 EIF2AK4Q9P2K8 1649 aaKnown RBP10.04□□□□□ -0.8
LINC02539-202ENST00000419220 FER1L4A9Z1Z3 1794 aa10.03□□□□□ -0.8
LINC02539-202ENST00000419220 ILDR1Q86SU0 546 aaPredicted RBP10.03□□□□□ -0.8
LINC02539-202ENST00000419220 CFAP44Q96MT7 982 aa10.03□□□□□ -0.8
LINC02539-202ENST00000419220 ADGRL2O95490 1459 aa10.03□□□□□ -0.8
LINC02539-202ENST00000419220 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
LINC02539-202ENST00000419220 ADAMTSL3P82987 1691 aa10.02□□□□□ -0.81
LINC02539-202ENST00000419220 SETD1BQ9UPS6 1966 aaKnown RBP10.01□□□□□ -0.81
LINC02539-202ENST00000419220 VARS2Q5ST30 1063 aaKnown RBP10.01□□□□□ -0.81
LINC02539-202ENST00000419220 ANKRD50Q9ULJ7 1429 aa10□□□□□ -0.81
LINC02539-202ENST00000419220 PSEN1P49768 467 aa10□□□□□ -0.81
LINC02539-202ENST00000419220 RIMS1Q86UR5 1692 aaKnown RBP9.99□□□□□ -0.81
LINC02539-202ENST00000419220 PTPRMP28827 1452 aa9.99□□□□□ -0.81
LINC02539-202ENST00000419220 RIOK3O14730 519 aaKnown RBP9.99□□□□□ -0.81
LINC02539-202ENST00000419220 MADDQ8WXG6 1647 aa9.99□□□□□ -0.81
LINC02539-202ENST00000419220 ZMYM3Q14202 1370 aa9.99□□□□□ -0.81
LINC02539-202ENST00000419220 ZNF687Q8N1G0 1237 aa9.98□□□□□ -0.81
LINC02539-202ENST00000419220 MROH2AA6NES4 1674 aa9.98□□□□□ -0.81
LINC02539-202ENST00000419220 ZC3H13Q5T200 1668 aaKnown RBP9.98□□□□□ -0.81
LINC02539-202ENST00000419220 KDM5DQ9BY66 1539 aa9.97□□□□□ -0.81
LINC02539-202ENST00000419220 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
LINC02539-202ENST00000419220 CHRM1P11229 460 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms