RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 EFCAB2Q5VUJ9 269 aa19.79■□□□□ 0.76
SEMA3B-203ENST00000419007 APAF1O14727 1248 aa19.78■□□□□ 0.76
SEMA3B-203ENST00000419007 IL27Q8NEV9 243 aa19.78■□□□□ 0.76
SEMA3B-203ENST00000419007 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
SEMA3B-203ENST00000419007 INSRP06213 1382 aa19.78■□□□□ 0.76
SEMA3B-203ENST00000419007 WDR7Q9Y4E6 1490 aa19.77■□□□□ 0.76
SEMA3B-203ENST00000419007 KDM2BQ8NHM5 1336 aa19.77■□□□□ 0.76
SEMA3B-203ENST00000419007 IQGAP3Q86VI3 1631 aa19.76■□□□□ 0.75
SEMA3B-203ENST00000419007 AFAP1Q8N556 730 aa19.76■□□□□ 0.75
SEMA3B-203ENST00000419007 DUOX2Q9NRD8 1548 aa19.76■□□□□ 0.75
SEMA3B-203ENST00000419007 LAMC1P11047 1609 aa19.75■□□□□ 0.75
SEMA3B-203ENST00000419007 SPINK5Q9NQ38 1064 aaPredicted RBP19.74■□□□□ 0.75
SEMA3B-203ENST00000419007 SPAG9O60271 1321 aaKnown RBP19.74■□□□□ 0.75
SEMA3B-203ENST00000419007 BCAR3O75815 825 aa19.74■□□□□ 0.75
SEMA3B-203ENST00000419007 SLFN5Q08AF3 891 aa19.74■□□□□ 0.75
SEMA3B-203ENST00000419007 FAM161AQ3B820 660 aa19.74■□□□□ 0.75
SEMA3B-203ENST00000419007 MAST1Q9Y2H9 1570 aa19.73■□□□□ 0.75
SEMA3B-203ENST00000419007 ZNF521Q96K83 1311 aa19.71■□□□□ 0.75
SEMA3B-203ENST00000419007 TRAPPC8Q9Y2L5 1435 aa19.71■□□□□ 0.75
SEMA3B-203ENST00000419007 ATP10AO60312 1499 aa19.7■□□□□ 0.74
SEMA3B-203ENST00000419007 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
SEMA3B-203ENST00000419007 PLXNC1O60486 1568 aa19.7■□□□□ 0.74
SEMA3B-203ENST00000419007 NFKBIBQ15653 356 aa19.7■□□□□ 0.74
SEMA3B-203ENST00000419007 C8orf34Q49A92 452 aa19.7■□□□□ 0.74
SEMA3B-203ENST00000419007 NEUROD2Q15784 382 aa19.69■□□□□ 0.74
SEMA3B-203ENST00000419007 CFAP70Q5T0N1 1121 aa19.69■□□□□ 0.74
SEMA3B-203ENST00000419007 TNNT2P45379 298 aaPredicted RBP19.69■□□□□ 0.74
SEMA3B-203ENST00000419007 SCAF11Q99590 1463 aaKnown RBP19.68■□□□□ 0.74
SEMA3B-203ENST00000419007 ASXL2Q76L83 1435 aa19.68■□□□□ 0.74
SEMA3B-203ENST00000419007 ASXL1Q8IXJ9 1541 aa19.68■□□□□ 0.74
SEMA3B-203ENST00000419007 ZCCHC11Q5TAX3 1644 aaKnown RBP19.67■□□□□ 0.74
SEMA3B-203ENST00000419007 UHRF1BP1LA0JNW5 1464 aa19.67■□□□□ 0.74
SEMA3B-203ENST00000419007 DMRT2Q9Y5R5 561 aa19.66■□□□□ 0.74
SEMA3B-203ENST00000419007 KIF3BO15066 747 aa19.66■□□□□ 0.74
SEMA3B-203ENST00000419007 PLCH2O75038 1416 aa19.66■□□□□ 0.74
SEMA3B-203ENST00000419007 EIF3AQ14152 1382 aaKnown RBP19.66■□□□□ 0.74
SEMA3B-203ENST00000419007 FRAT1Q92837 279 aaPredicted RBP19.64■□□□□ 0.74
SEMA3B-203ENST00000419007 RNF17Q9BXT8 1623 aaKnown RBP19.64■□□□□ 0.73
SEMA3B-203ENST00000419007 E9PSI1 815 aa19.64■□□□□ 0.73
SEMA3B-203ENST00000419007 CHGAP10645 457 aaKnown RBP19.64■□□□□ 0.73
SEMA3B-203ENST00000419007 MADDQ8WXG6 1647 aa19.64■□□□□ 0.73
SEMA3B-203ENST00000419007 PIK3C2GO75747 1445 aa19.63■□□□□ 0.73
SEMA3B-203ENST00000419007 GSE1Q14687 1217 aa19.63■□□□□ 0.73
SEMA3B-203ENST00000419007 COG6Q9Y2V7 657 aa19.62■□□□□ 0.73
SEMA3B-203ENST00000419007 NKTRP30414 1462 aaKnown RBP19.62■□□□□ 0.73
SEMA3B-203ENST00000419007 RRP7AQ9Y3A4 280 aaKnown RBP19.62■□□□□ 0.73
SEMA3B-203ENST00000419007 RIMBP3CA6NJZ7 1639 aa19.61■□□□□ 0.73
SEMA3B-203ENST00000419007 RIMBP3BA6NNM3 1639 aa19.61■□□□□ 0.73
SEMA3B-203ENST00000419007 RIMBP3Q9UFD9 1639 aa19.61■□□□□ 0.73
SEMA3B-203ENST00000419007 IGHDP01880 384 aa19.61■□□□□ 0.73
SEMA3B-203ENST00000419007 PANK1Q8TE04 598 aa19.61■□□□□ 0.73
SEMA3B-203ENST00000419007 CARD14Q9BXL6 1004 aa19.61■□□□□ 0.73
SEMA3B-203ENST00000419007 SYNMO15061 1565 aa19.6■□□□□ 0.73
SEMA3B-203ENST00000419007 TRMT2AQ8IZ69 625 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-203ENST00000419007 KANK1Q14678 1352 aa19.6■□□□□ 0.73
SEMA3B-203ENST00000419007 ADGRF5Q8IZF2 1346 aa19.6■□□□□ 0.73
SEMA3B-203ENST00000419007 CENPJQ9HC77 1338 aaPredicted RBP19.59■□□□□ 0.73
SEMA3B-203ENST00000419007 IQGAP1P46940 1657 aa19.59■□□□□ 0.73
SEMA3B-203ENST00000419007 BRPF3Q9ULD4 1205 aa19.59■□□□□ 0.73
SEMA3B-203ENST00000419007 FAM69CQ0P6D2 419 aa19.58■□□□□ 0.73
SEMA3B-203ENST00000419007 STAC3Q96MF2 364 aa19.58■□□□□ 0.73
SEMA3B-203ENST00000419007 FRAT2O75474 233 aaPredicted RBP19.58■□□□□ 0.72
SEMA3B-203ENST00000419007 SCAPERQ9BY12 1400 aa19.57■□□□□ 0.72
SEMA3B-203ENST00000419007 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
SEMA3B-203ENST00000419007 TRPM2O94759 1503 aa19.56■□□□□ 0.72
SEMA3B-203ENST00000419007 CLTCL1P53675 1640 aa19.56■□□□□ 0.72
SEMA3B-203ENST00000419007 ABCC1P33527 1531 aa19.56■□□□□ 0.72
SEMA3B-203ENST00000419007 WWC1Q8IX03 1113 aa19.56■□□□□ 0.72
SEMA3B-203ENST00000419007 BCL2L13Q9BXK5 485 aa19.56■□□□□ 0.72
SEMA3B-203ENST00000419007 NPC1L1Q9UHC9 1359 aa19.55■□□□□ 0.72
SEMA3B-203ENST00000419007 ANO8Q9HCE9 1232 aaPredicted RBP19.55■□□□□ 0.72
SEMA3B-203ENST00000419007 TRAK1Q9UPV9 953 aa19.55■□□□□ 0.72
SEMA3B-203ENST00000419007 CLUAP1Q96AJ1 413 aa19.54■□□□□ 0.72
SEMA3B-203ENST00000419007 CGNL1Q0VF96 1302 aa19.54■□□□□ 0.72
SEMA3B-203ENST00000419007 SPHKAPQ2M3C7 1700 aa19.53■□□□□ 0.72
SEMA3B-203ENST00000419007 PTPRTO14522 1441 aa19.52■□□□□ 0.72
SEMA3B-203ENST00000419007 UGGT1Q9NYU2 1555 aa19.51■□□□□ 0.71
SEMA3B-203ENST00000419007 SEC24BO95487 1268 aa19.51■□□□□ 0.71
SEMA3B-203ENST00000419007 PDE3AQ14432 1141 aa19.51■□□□□ 0.71
SEMA3B-203ENST00000419007 SLC12A5Q9H2X9 1139 aa19.51■□□□□ 0.71
SEMA3B-203ENST00000419007 KDM5AP29375 1690 aaKnown RBP19.51■□□□□ 0.71
SEMA3B-203ENST00000419007 ERVK-7P63135 1459 aa19.51■□□□□ 0.71
SEMA3B-203ENST00000419007 MYOM1P52179 1685 aa19.5■□□□□ 0.71
SEMA3B-203ENST00000419007 SLKQ9H2G2 1235 aaPredicted RBP19.49■□□□□ 0.71
SEMA3B-203ENST00000419007 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
SEMA3B-203ENST00000419007 TCP11L2Q8N4U5 519 aa19.49■□□□□ 0.71
SEMA3B-203ENST00000419007 CEP152O94986 1710 aa19.49■□□□□ 0.71
SEMA3B-203ENST00000419007 CD109Q6YHK3 1445 aa19.49■□□□□ 0.71
SEMA3B-203ENST00000419007 TNNQ9UQP3 1299 aa19.49■□□□□ 0.71
SEMA3B-203ENST00000419007 TMEM132EQ6IEE7 984 aa19.48■□□□□ 0.71
SEMA3B-203ENST00000419007 ZFYVE16Q7Z3T8 1539 aa19.47■□□□□ 0.71
SEMA3B-203ENST00000419007 RTEL1-TNFRSF6BF6WH68 1400 aa19.46■□□□□ 0.71
SEMA3B-203ENST00000419007 NSD3Q9BZ95 1437 aa19.46■□□□□ 0.71
SEMA3B-203ENST00000419007 NGEFQ8N5V2 710 aa19.46■□□□□ 0.71
SEMA3B-203ENST00000419007 MAPK8IP3Q9UPT6 1336 aa19.46■□□□□ 0.71
SEMA3B-203ENST00000419007 RAPGEF3O95398 923 aa19.46■□□□□ 0.71
SEMA3B-203ENST00000419007 RUNDC1Q96C34 613 aa19.46■□□□□ 0.71
SEMA3B-203ENST00000419007 FANCAO15360 1455 aa19.45■□□□□ 0.7
SEMA3B-203ENST00000419007 MTHFSP49914 203 aa19.45■□□□□ 0.7
SEMA3B-203ENST00000419007 RARSP54136 660 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms