RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 NBPF1Q3BBV0 1214 aa29.27■■■□□ 2.28
CASC3-203ENST00000418132 MYO5BQ9ULV0 1848 aa29.27■■■□□ 2.28
CASC3-203ENST00000418132 NEXMIFQ5QGS0 1516 aa29.26■■■□□ 2.28
CASC3-203ENST00000418132 ADGRF5Q8IZF2 1346 aa29.25■■■□□ 2.27
CASC3-203ENST00000418132 C3P01024 1663 aa29.24■■■□□ 2.27
CASC3-203ENST00000418132 TNRQ92752 1358 aa29.22■■■□□ 2.27
CASC3-203ENST00000418132 PIK3C2GO75747 1445 aa29.19■■■□□ 2.26
CASC3-203ENST00000418132 ZFYVE9O95405 1425 aa29.19■■■□□ 2.26
CASC3-203ENST00000418132 A2ML1A8K2U0 1454 aa29.19■■■□□ 2.26
CASC3-203ENST00000418132 VGFO15240 615 aaPredicted RBP29.17■■■□□ 2.26
CASC3-203ENST00000418132 KDM5AP29375 1690 aaKnown RBP29.16■■■□□ 2.26
CASC3-203ENST00000418132 ADAMTSL3P82987 1691 aa29.16■■■□□ 2.26
CASC3-203ENST00000418132 STAG3Q9UJ98 1225 aa29.15■■■□□ 2.26
CASC3-203ENST00000418132 CEBPAP49715 358 aaPredicted RBP29.15■■■□□ 2.26
CASC3-203ENST00000418132 POLR1AO95602 1720 aaPredicted RBP29.14■■■□□ 2.26
CASC3-203ENST00000418132 IQGAP1P46940 1657 aa29.13■■■□□ 2.25
CASC3-203ENST00000418132 CFAP70Q5T0N1 1121 aa29.13■■■□□ 2.25
CASC3-203ENST00000418132 WASHC2AQ641Q2 1341 aa29.12■■■□□ 2.25
CASC3-203ENST00000418132 NLRP1Q9C000 1473 aa29.12■■■□□ 2.25
CASC3-203ENST00000418132 ST20-MTHFSA0A0A6YYL1 179 aa29.11■■■□□ 2.25
CASC3-203ENST00000418132 RIMS1Q86UR5 1692 aaKnown RBP29.11■■■□□ 2.25
CASC3-203ENST00000418132 SETBP1Q9Y6X0 1596 aa29.1■■■□□ 2.25
CASC3-203ENST00000418132 C11orf95C9JLR9 678 aaPredicted RBP29.1■■■□□ 2.25
CASC3-203ENST00000418132 C14orf93Q9H972 538 aaKnown RBP29.1■■■□□ 2.25
CASC3-203ENST00000418132 DDX10Q13206 875 aaKnown RBP29.09■■■□□ 2.25
CASC3-203ENST00000418132 SCAF11Q99590 1463 aaKnown RBP29.08■■■□□ 2.25
CASC3-203ENST00000418132 CCDC7Q96M83 1385 aa29.08■■■□□ 2.25
CASC3-203ENST00000418132 UBR1Q8IWV7 1749 aa29.08■■■□□ 2.25
CASC3-203ENST00000418132 NUTM2DQ5VT03 806 aaPredicted RBP29.07■■■□□ 2.24
CASC3-203ENST00000418132 RIMS2Q9UQ26 1411 aa29.05■■■□□ 2.24
CASC3-203ENST00000418132 ADGRB1O14514 1584 aa29.04■■■□□ 2.24
CASC3-203ENST00000418132 KIF7Q2M1P5 1343 aa29.04■■■□□ 2.24
CASC3-203ENST00000418132 TESK2Q96S53 571 aa28.99■■■□□ 2.23
CASC3-203ENST00000418132 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.98■■■□□ 2.23
CASC3-203ENST00000418132 EIF3AQ14152 1382 aaKnown RBP28.98■■■□□ 2.23
CASC3-203ENST00000418132 MYO3AQ8NEV4 1616 aa28.98■■■□□ 2.23
CASC3-203ENST00000418132 TMEM2Q9UHN6 1383 aa28.97■■■□□ 2.23
CASC3-203ENST00000418132 PLPPR3Q6T4P5 718 aa28.97■■■□□ 2.23
CASC3-203ENST00000418132 HDGFP51858 240 aaKnown RBP28.94■■■□□ 2.22
CASC3-203ENST00000418132 MIER1Q8N108 512 aa28.94■■■□□ 2.22
CASC3-203ENST00000418132 ALKQ9UM73 1620 aa28.93■■■□□ 2.22
CASC3-203ENST00000418132 TMEM132EQ6IEE7 984 aa28.92■■■□□ 2.22
CASC3-203ENST00000418132 ASXL1Q8IXJ9 1541 aa28.91■■■□□ 2.22
CASC3-203ENST00000418132 SLIT1O75093 1534 aa28.89■■■□□ 2.22
CASC3-203ENST00000418132 ARHGAP23Q9P227 1491 aa28.88■■■□□ 2.21
CASC3-203ENST00000418132 NRXN3Q9Y4C0 1643 aa28.88■■■□□ 2.21
CASC3-203ENST00000418132 CEP170BQ9Y4F5 1589 aaPredicted RBP28.87■■■□□ 2.21
CASC3-203ENST00000418132 SETD1AO15047 1707 aaKnown RBP28.87■■■□□ 2.21
CASC3-203ENST00000418132 TMF1P82094 1093 aa28.86■■■□□ 2.21
CASC3-203ENST00000418132 DISP3Q9P2K9 1392 aa28.86■■■□□ 2.21
CASC3-203ENST00000418132 SETD1BQ9UPS6 1966 aaKnown RBP28.86■■■□□ 2.21
CASC3-203ENST00000418132 THEMISQ8N1K5 641 aaPredicted RBP28.85■■■□□ 2.21
CASC3-203ENST00000418132 PTPRMP28827 1452 aa28.85■■■□□ 2.21
CASC3-203ENST00000418132 TRAK1Q9UPV9 953 aa28.84■■■□□ 2.21
CASC3-203ENST00000418132 ZNF142P52746 1687 aaPredicted RBP28.84■■■□□ 2.21
CASC3-203ENST00000418132 SBNO2Q9Y2G9 1366 aa28.84■■■□□ 2.21
CASC3-203ENST00000418132 ARHGEF28Q8N1W1 1705 aaKnown RBP28.83■■■□□ 2.21
CASC3-203ENST00000418132 SLC24A1O60721 1099 aa28.82■■■□□ 2.2
CASC3-203ENST00000418132 SENP3Q9H4L4 574 aaPredicted RBP28.82■■■□□ 2.2
CASC3-203ENST00000418132 CENPJQ9HC77 1338 aaPredicted RBP28.81■■■□□ 2.2
CASC3-203ENST00000418132 LTKP29376 864 aa28.81■■■□□ 2.2
CASC3-203ENST00000418132 POLR3GLQ9BT43 218 aa28.81■■■□□ 2.2
CASC3-203ENST00000418132 YTHDC2Q9H6S0 1430 aaKnown RBP28.8■■■□□ 2.2
CASC3-203ENST00000418132 PLEKHG1Q9ULL1 1385 aa28.79■■■□□ 2.2
CASC3-203ENST00000418132 QRICH2Q9H0J4 1663 aa28.78■■■□□ 2.2
CASC3-203ENST00000418132 TXNDC2Q86VQ3 553 aa28.78■■■□□ 2.2
CASC3-203ENST00000418132 EID1Q9Y6B2 187 aa28.78■■■□□ 2.2
CASC3-203ENST00000418132 CDCA8Q53HL2 280 aa28.75■■■□□ 2.19
CASC3-203ENST00000418132 ADAMTS13Q76LX8 1427 aa28.74■■■□□ 2.19
CASC3-203ENST00000418132 ANP32CO43423 234 aa28.73■■■□□ 2.19
CASC3-203ENST00000418132 LRPPRCP42704 1394 aaKnown RBP28.73■■■□□ 2.19
CASC3-203ENST00000418132 STK26Q9P289 416 aa28.72■■■□□ 2.19
CASC3-203ENST00000418132 DLC1Q96QB1 1528 aa28.71■■■□□ 2.19
CASC3-203ENST00000418132 METP08581 1390 aa28.71■■■□□ 2.19
CASC3-203ENST00000418132 MED14O60244 1454 aa28.71■■■□□ 2.19
CASC3-203ENST00000418132 ABCC11Q96J66 1382 aa28.69■■■□□ 2.18
CASC3-203ENST00000418132 BCANQ96GW7 911 aa28.68■■■□□ 2.18
CASC3-203ENST00000418132 KNDC1Q76NI1 1749 aa28.65■■■□□ 2.18
CASC3-203ENST00000418132 TECPR2O15040 1411 aa28.64■■■□□ 2.18
CASC3-203ENST00000418132 DIP2AQ14689 1571 aa28.63■■■□□ 2.17
CASC3-203ENST00000418132 PRAM1Q96QH2 718 aa28.63■■■□□ 2.17
CASC3-203ENST00000418132 MYOM1P52179 1685 aa28.62■■■□□ 2.17
CASC3-203ENST00000418132 TBX22Q9Y458 520 aa28.61■■■□□ 2.17
CASC3-203ENST00000418132 TULP4Q9NRJ4 1543 aa28.61■■■□□ 2.17
CASC3-203ENST00000418132 POGKQ9P215 609 aa28.61■■■□□ 2.17
CASC3-203ENST00000418132 ANKLE2Q86XL3 938 aa28.6■■■□□ 2.17
CASC3-203ENST00000418132 CPS1P31327 1500 aa28.6■■■□□ 2.17
CASC3-203ENST00000418132 SIRT1Q96EB6 747 aa28.59■■■□□ 2.17
CASC3-203ENST00000418132 PUS7Q96PZ0 661 aaKnown RBP28.59■■■□□ 2.17
CASC3-203ENST00000418132 SLC26A8Q96RN1 970 aa28.59■■■□□ 2.17
CASC3-203ENST00000418132 EVC2Q86UK5 1308 aa28.58■■■□□ 2.17
CASC3-203ENST00000418132 FAM135BQ49AJ0 1406 aa28.57■■■□□ 2.16
CASC3-203ENST00000418132 KDM4FA0A1W2PPD8 638 aa28.57■■■□□ 2.16
CASC3-203ENST00000418132 SAFB2Q14151 953 aaKnown RBP eCLIP28.57■■■□□ 2.16
CASC3-203ENST00000418132 CCER2I3L3R5 266 aa28.56■■■□□ 2.16
CASC3-203ENST00000418132 PRKRIP1Q9H875 184 aaPredicted RBP28.56■■■□□ 2.16
CASC3-203ENST00000418132 PER1O15534 1290 aaPredicted RBP28.55■■■□□ 2.16
CASC3-203ENST00000418132 PANK3Q9H999 370 aa28.55■■■□□ 2.16
CASC3-203ENST00000418132 PLEKHH1Q9ULM0 1364 aa28.53■■■□□ 2.16
CASC3-203ENST00000418132 PTPRUQ92729 1446 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms