RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
LINC00940-201ENST00000418006 ARID4BQ4LE39 1312 aaPredicted RBP18.76■□□□□ 0.59
LINC00940-201ENST00000418006 COL17A1Q9UMD9 1497 aaPredicted RBP18.76■□□□□ 0.59
LINC00940-201ENST00000418006 CAMSAP1Q5T5Y3 1602 aa18.76■□□□□ 0.59
LINC00940-201ENST00000418006 MROH2AA6NES4 1674 aa18.75■□□□□ 0.59
LINC00940-201ENST00000418006 ERICH6BQ5W0A0 696 aa18.74■□□□□ 0.59
LINC00940-201ENST00000418006 TESK2Q96S53 571 aa18.74■□□□□ 0.59
LINC00940-201ENST00000418006 ZMYM4Q5VZL5 1548 aa18.74■□□□□ 0.59
LINC00940-201ENST00000418006 DISP3Q9P2K9 1392 aa18.73■□□□□ 0.59
LINC00940-201ENST00000418006 FBXO31Q5XUX0 539 aaPredicted RBP18.73■□□□□ 0.59
LINC00940-201ENST00000418006 STAC3Q96MF2 364 aa18.73■□□□□ 0.59
LINC00940-201ENST00000418006 NOS1P29475 1434 aa18.73■□□□□ 0.59
LINC00940-201ENST00000418006 PPP4R2Q9NY27 417 aa18.73■□□□□ 0.59
LINC00940-201ENST00000418006 MRS2Q9HD23 443 aa18.72■□□□□ 0.59
LINC00940-201ENST00000418006 SIGLEC1Q9BZZ2 1709 aa18.72■□□□□ 0.59
LINC00940-201ENST00000418006 TMF1P82094 1093 aa18.71■□□□□ 0.59
LINC00940-201ENST00000418006 IDI1Q13907 227 aa18.71■□□□□ 0.59
LINC00940-201ENST00000418006 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.59
LINC00940-201ENST00000418006 LAMC1P11047 1609 aa18.69■□□□□ 0.58
LINC00940-201ENST00000418006 PRKCSHP14314 528 aaPredicted RBP18.68■□□□□ 0.58
LINC00940-201ENST00000418006 ADGRB3O60242 1522 aa18.68■□□□□ 0.58
LINC00940-201ENST00000418006 TRHP20396 242 aaPredicted RBP18.68■□□□□ 0.58
LINC00940-201ENST00000418006 SYNMO15061 1565 aa18.67■□□□□ 0.58
LINC00940-201ENST00000418006 TMEM132EQ6IEE7 984 aa18.66■□□□□ 0.58
LINC00940-201ENST00000418006 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
LINC00940-201ENST00000418006 MYOM2P54296 1465 aa18.65■□□□□ 0.58
LINC00940-201ENST00000418006 ARHGAP31Q2M1Z3 1444 aa18.64■□□□□ 0.57
LINC00940-201ENST00000418006 NEURL4Q96JN8 1562 aa18.64■□□□□ 0.57
LINC00940-201ENST00000418006 STAG3Q9UJ98 1225 aa18.64■□□□□ 0.57
LINC00940-201ENST00000418006 ZC3H13Q5T200 1668 aaKnown RBP18.64■□□□□ 0.57
LINC00940-201ENST00000418006 ESF1Q9H501 851 aaKnown RBP18.63■□□□□ 0.57
LINC00940-201ENST00000418006 PANK3Q9H999 370 aa18.63■□□□□ 0.57
LINC00940-201ENST00000418006 TRAK1Q9UPV9 953 aa18.63■□□□□ 0.57
LINC00940-201ENST00000418006 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
LINC00940-201ENST00000418006 IFT172Q9UG01 1749 aa18.62■□□□□ 0.57
LINC00940-201ENST00000418006 IQGAP1P46940 1657 aa18.62■□□□□ 0.57
LINC00940-201ENST00000418006 EIF3AQ14152 1382 aaKnown RBP18.61■□□□□ 0.57
LINC00940-201ENST00000418006 B4GALNT3Q6L9W6 998 aa18.61■□□□□ 0.57
LINC00940-201ENST00000418006 NOP58Q9Y2X3 529 aaKnown RBP18.61■□□□□ 0.57
LINC00940-201ENST00000418006 RPGRIP1LQ68CZ1 1315 aa18.6■□□□□ 0.57
LINC00940-201ENST00000418006 VGFO15240 615 aaPredicted RBP18.6■□□□□ 0.57
LINC00940-201ENST00000418006 CC2D1BQ5T0F9 858 aaKnown RBP18.6■□□□□ 0.57
LINC00940-201ENST00000418006 CLTCQ00610 1675 aaKnown RBP18.59■□□□□ 0.57
LINC00940-201ENST00000418006 PREX1Q8TCU6 1659 aa18.59■□□□□ 0.57
LINC00940-201ENST00000418006 PPLO60437 1756 aa18.59■□□□□ 0.57
LINC00940-201ENST00000418006 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
LINC00940-201ENST00000418006 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
LINC00940-201ENST00000418006 PIK3C2GO75747 1445 aa18.58■□□□□ 0.56
LINC00940-201ENST00000418006 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.56
LINC00940-201ENST00000418006 SENP3-EIF4A1A0A087X0R7 540 aa18.57■□□□□ 0.56
LINC00940-201ENST00000418006 ARHGEF40Q8TER5 1519 aa18.57■□□□□ 0.56
LINC00940-201ENST00000418006 TMC1Q8TDI8 760 aa18.57■□□□□ 0.56
LINC00940-201ENST00000418006 AGLP35573 1532 aa18.57■□□□□ 0.56
LINC00940-201ENST00000418006 KIAA1210Q9ULL0 1709 aa18.57■□□□□ 0.56
LINC00940-201ENST00000418006 NBR1Q14596 966 aa18.56■□□□□ 0.56
LINC00940-201ENST00000418006 PER1O15534 1290 aaPredicted RBP18.56■□□□□ 0.56
LINC00940-201ENST00000418006 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
LINC00940-201ENST00000418006 REREQ9P2R6 1566 aa18.56■□□□□ 0.56
LINC00940-201ENST00000418006 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
LINC00940-201ENST00000418006 ERVK-7P63135 1459 aa18.55■□□□□ 0.56
LINC00940-201ENST00000418006 CDCA8Q53HL2 280 aa18.55■□□□□ 0.56
LINC00940-201ENST00000418006 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
LINC00940-201ENST00000418006 STK26Q9P289 416 aa18.54■□□□□ 0.56
LINC00940-201ENST00000418006 MYO5BQ9ULV0 1848 aa18.54■□□□□ 0.56
LINC00940-201ENST00000418006 SAFB2Q14151 953 aaKnown RBP eCLIP18.54■□□□□ 0.56
LINC00940-201ENST00000418006 KTN1Q86UP2 1357 aaKnown RBP18.53■□□□□ 0.56
LINC00940-201ENST00000418006 NEXMIFQ5QGS0 1516 aa18.53■□□□□ 0.56
LINC00940-201ENST00000418006 CENPJQ9HC77 1338 aaPredicted RBP18.52■□□□□ 0.56
LINC00940-201ENST00000418006 RALBP1Q15311 655 aa18.52■□□□□ 0.56
LINC00940-201ENST00000418006 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
LINC00940-201ENST00000418006 ZMYM3Q14202 1370 aa18.51■□□□□ 0.55
LINC00940-201ENST00000418006 KNSTRNQ9Y448 316 aa18.5■□□□□ 0.55
LINC00940-201ENST00000418006 TMEM131LA2VDJ0 1609 aa18.5■□□□□ 0.55
LINC00940-201ENST00000418006 ZBED9Q6R2W3 1325 aa18.48■□□□□ 0.55
LINC00940-201ENST00000418006 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
LINC00940-201ENST00000418006 SETBP1Q9Y6X0 1596 aa18.47■□□□□ 0.55
LINC00940-201ENST00000418006 CEBPAP49715 358 aaPredicted RBP18.45■□□□□ 0.54
LINC00940-201ENST00000418006 PNISRQ8TF01 805 aaKnown RBP18.45■□□□□ 0.54
LINC00940-201ENST00000418006 PARD3Q8TEW0 1356 aa18.45■□□□□ 0.54
LINC00940-201ENST00000418006 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
LINC00940-201ENST00000418006 NLRP13Q86W25 1043 aa18.44■□□□□ 0.54
LINC00940-201ENST00000418006 ANO8Q9HCE9 1232 aaPredicted RBP18.44■□□□□ 0.54
LINC00940-201ENST00000418006 KDM5AP29375 1690 aaKnown RBP18.43■□□□□ 0.54
LINC00940-201ENST00000418006 SPATA31D1Q6ZQQ2 1576 aa18.42■□□□□ 0.54
LINC00940-201ENST00000418006 IPO9Q96P70 1041 aaKnown RBP18.41■□□□□ 0.54
LINC00940-201ENST00000418006 BRD4O60885 1362 aaPredicted RBP18.41■□□□□ 0.54
LINC00940-201ENST00000418006 A2ML1A8K2U0 1454 aa18.41■□□□□ 0.54
LINC00940-201ENST00000418006 ZFYVE9O95405 1425 aa18.41■□□□□ 0.54
LINC00940-201ENST00000418006 SLC12A5Q9H2X9 1139 aa18.4■□□□□ 0.54
LINC00940-201ENST00000418006 QRICH2Q9H0J4 1663 aa18.4■□□□□ 0.54
LINC00940-201ENST00000418006 ANP32AP39687 249 aaKnown RBP18.4■□□□□ 0.54
LINC00940-201ENST00000418006 POGKQ9P215 609 aa18.4■□□□□ 0.54
LINC00940-201ENST00000418006 AMER1Q5JTC6 1135 aaPredicted RBP18.39■□□□□ 0.53
LINC00940-201ENST00000418006 PRAM1Q96QH2 718 aa18.39■□□□□ 0.53
LINC00940-201ENST00000418006 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.53
LINC00940-201ENST00000418006 MYOM1P52179 1685 aa18.39■□□□□ 0.53
LINC00940-201ENST00000418006 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.53
LINC00940-201ENST00000418006 CABP2Q9NPB3 220 aa18.39■□□□□ 0.53
LINC00940-201ENST00000418006 SALL2Q9Y467 1007 aaPredicted RBP18.39■□□□□ 0.53
LINC00940-201ENST00000418006 MYO3AQ8NEV4 1616 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms