RNA–Protein interactions for RNA: ENST00000417983.5

LINC00475-203, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-203ENST00000417983 RNF216Q9NWF9 866 aaPredicted RBP24.25■■□□□ 1.47
LINC00475-203ENST00000417983 RPRD2Q5VT52 1461 aaKnown RBP24.25■■□□□ 1.47
LINC00475-203ENST00000417983 ADGRB3O60242 1522 aa24.24■■□□□ 1.47
LINC00475-203ENST00000417983 MED1Q15648 1581 aaPredicted RBP24.21■■□□□ 1.47
LINC00475-203ENST00000417983 HDGFP51858 240 aaKnown RBP24.21■■□□□ 1.47
LINC00475-203ENST00000417983 ALKQ9UM73 1620 aa24.21■■□□□ 1.47
LINC00475-203ENST00000417983 PPP1R15AO75807 674 aaPredicted RBP24.19■■□□□ 1.46
LINC00475-203ENST00000417983 SLC26A8Q96RN1 970 aa24.19■■□□□ 1.46
LINC00475-203ENST00000417983 TET3O43151 1660 aa24.18■■□□□ 1.46
LINC00475-203ENST00000417983 KCNA6P17658 529 aa24.18■■□□□ 1.46
LINC00475-203ENST00000417983 ROCK1Q13464 1354 aa24.16■■□□□ 1.46
LINC00475-203ENST00000417983 CHGAP10645 457 aaKnown RBP24.15■■□□□ 1.46
LINC00475-203ENST00000417983 PROSER2Q86WR7 435 aaPredicted RBP24.15■■□□□ 1.46
LINC00475-203ENST00000417983 TMEM94Q12767 1356 aa24.15■■□□□ 1.46
LINC00475-203ENST00000417983 UNC13BO14795 1591 aa24.14■■□□□ 1.45
LINC00475-203ENST00000417983 ITGAEP38570 1179 aa24.14■■□□□ 1.45
LINC00475-203ENST00000417983 GCC2Q8IWJ2 1684 aa24.13■■□□□ 1.45
LINC00475-203ENST00000417983 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.11■■□□□ 1.45
LINC00475-203ENST00000417983 RIMS2Q9UQ26 1411 aa24.1■■□□□ 1.45
LINC00475-203ENST00000417983 NKTRP30414 1462 aaKnown RBP24.1■■□□□ 1.45
LINC00475-203ENST00000417983 PLEKHG1Q9ULL1 1385 aa24.09■■□□□ 1.45
LINC00475-203ENST00000417983 XIRP1Q702N8 1843 aaKnown RBP24.08■■□□□ 1.45
LINC00475-203ENST00000417983 NUP155O75694 1391 aa24.08■■□□□ 1.45
LINC00475-203ENST00000417983 ZFYVE9O95405 1425 aa24.07■■□□□ 1.44
LINC00475-203ENST00000417983 MSH6P52701 1360 aa24.06■■□□□ 1.44
LINC00475-203ENST00000417983 PPARGC1BQ86YN6 1023 aaKnown RBP24.06■■□□□ 1.44
LINC00475-203ENST00000417983 FAM135BQ49AJ0 1406 aa24.06■■□□□ 1.44
LINC00475-203ENST00000417983 NWD1Q149M9 1564 aa24.05■■□□□ 1.44
LINC00475-203ENST00000417983 C1QBPQ07021 282 aaKnown RBP24.05■■□□□ 1.44
LINC00475-203ENST00000417983 TMEM131LA2VDJ0 1609 aa24.05■■□□□ 1.44
LINC00475-203ENST00000417983 IQGAP3Q86VI3 1631 aa24.05■■□□□ 1.44
LINC00475-203ENST00000417983 RBM33Q96EV2 1170 aaKnown RBP24.04■■□□□ 1.44
LINC00475-203ENST00000417983 E9PCH4 1651 aa24.03■■□□□ 1.44
LINC00475-203ENST00000417983 MYO5BQ9ULV0 1848 aa24.02■■□□□ 1.44
LINC00475-203ENST00000417983 TBX22Q9Y458 520 aa24.01■■□□□ 1.43
LINC00475-203ENST00000417983 C14orf37Q86TY3 774 aa24■■□□□ 1.43
LINC00475-203ENST00000417983 NUTM2DQ5VT03 806 aaPredicted RBP23.98■■□□□ 1.43
LINC00475-203ENST00000417983 ROBO1Q9Y6N7 1651 aa23.96■■□□□ 1.43
LINC00475-203ENST00000417983 SLAIN2Q9P270 581 aa23.95■■□□□ 1.42
LINC00475-203ENST00000417983 DIP2AQ14689 1571 aa23.95■■□□□ 1.42
LINC00475-203ENST00000417983 CHD2O14647 1828 aaKnown RBP23.94■■□□□ 1.42
LINC00475-203ENST00000417983 PIK3R4Q99570 1358 aa23.93■■□□□ 1.42
LINC00475-203ENST00000417983 NCOA3Q9Y6Q9 1424 aa23.93■■□□□ 1.42
LINC00475-203ENST00000417983 ZNF326Q5BKZ1 582 aaKnown RBP23.92■■□□□ 1.42
LINC00475-203ENST00000417983 ADAMTS13Q76LX8 1427 aa23.91■■□□□ 1.42
LINC00475-203ENST00000417983 TRPM2O94759 1503 aa23.89■■□□□ 1.42
LINC00475-203ENST00000417983 ATF3P18847 181 aa23.88■■□□□ 1.41
LINC00475-203ENST00000417983 CADPS2Q86UW7 1296 aa23.87■■□□□ 1.41
LINC00475-203ENST00000417983 SPHKAPQ2M3C7 1700 aa23.87■■□□□ 1.41
LINC00475-203ENST00000417983 RRBP1Q9P2E9 1410 aaKnown RBP23.85■■□□□ 1.41
LINC00475-203ENST00000417983 C19orf44Q9H6X5 657 aa23.85■■□□□ 1.41
LINC00475-203ENST00000417983 AMOTL2Q9Y2J4 779 aa23.85■■□□□ 1.41
LINC00475-203ENST00000417983 PHLPP1O60346 1717 aa23.84■■□□□ 1.41
LINC00475-203ENST00000417983 JCADQ9P266 1359 aa23.83■■□□□ 1.41
LINC00475-203ENST00000417983 TRIM52Q96A61 297 aa23.81■■□□□ 1.4
LINC00475-203ENST00000417983 NAIPQ13075 1403 aa23.79■■□□□ 1.4
LINC00475-203ENST00000417983 RGS17Q9UGC6 210 aaPredicted RBP23.79■■□□□ 1.4
LINC00475-203ENST00000417983 SETBP1Q9Y6X0 1596 aa23.78■■□□□ 1.4
LINC00475-203ENST00000417983 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.77■■□□□ 1.4
LINC00475-203ENST00000417983 PTPRUQ92729 1446 aa23.76■■□□□ 1.39
LINC00475-203ENST00000417983 MEX3CQ5U5Q3 659 aaKnown RBP23.74■■□□□ 1.39
LINC00475-203ENST00000417983 DCCP43146 1447 aa23.74■■□□□ 1.39
LINC00475-203ENST00000417983 CLTCL1P53675 1640 aa23.73■■□□□ 1.39
LINC00475-203ENST00000417983 SPATA31A6Q5VVP1 1343 aa23.72■■□□□ 1.39
LINC00475-203ENST00000417983 HFM1A2PYH4 1435 aa23.72■■□□□ 1.39
LINC00475-203ENST00000417983 COL16A1Q07092 1604 aaPredicted RBP23.72■■□□□ 1.39
LINC00475-203ENST00000417983 NRXN3Q9Y4C0 1643 aa23.72■■□□□ 1.39
LINC00475-203ENST00000417983 KIF1BO60333 1816 aa23.71■■□□□ 1.39
LINC00475-203ENST00000417983 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
LINC00475-203ENST00000417983 XRN1Q8IZH2 1706 aaKnown RBP23.7■■□□□ 1.39
LINC00475-203ENST00000417983 METP08581 1390 aa23.7■■□□□ 1.38
LINC00475-203ENST00000417983 POTEAQ6S8J7 498 aa23.7■■□□□ 1.38
LINC00475-203ENST00000417983 AHDC1Q5TGY3 1603 aaPredicted RBP23.7■■□□□ 1.38
LINC00475-203ENST00000417983 NEXMIFQ5QGS0 1516 aa23.69■■□□□ 1.38
LINC00475-203ENST00000417983 VGFO15240 615 aaPredicted RBP23.69■■□□□ 1.38
LINC00475-203ENST00000417983 BRINP3Q76B58 766 aa23.68■■□□□ 1.38
LINC00475-203ENST00000417983 RPGRIP1LQ68CZ1 1315 aa23.65■■□□□ 1.38
LINC00475-203ENST00000417983 ADGRL3Q9HAR2 1447 aa23.64■■□□□ 1.37
LINC00475-203ENST00000417983 ZNF772Q68DY9 489 aaPredicted RBP23.63■■□□□ 1.37
LINC00475-203ENST00000417983 ASXL1Q8IXJ9 1541 aa23.63■■□□□ 1.37
LINC00475-203ENST00000417983 MST1RQ04912 1400 aa23.62■■□□□ 1.37
LINC00475-203ENST00000417983 SHPRHQ149N8 1683 aa23.61■■□□□ 1.37
LINC00475-203ENST00000417983 NUTM2BA6NNL0 878 aaPredicted RBP23.59■■□□□ 1.37
LINC00475-203ENST00000417983 NUTM2EB1AL46 878 aaPredicted RBP23.59■■□□□ 1.37
LINC00475-203ENST00000417983 NUTM2AQ8IVF1 878 aaPredicted RBP23.59■■□□□ 1.37
LINC00475-203ENST00000417983 LRP6O75581 1613 aa23.59■■□□□ 1.37
LINC00475-203ENST00000417983 LRRC59Q96AG4 307 aaKnown RBP23.58■■□□□ 1.37
LINC00475-203ENST00000417983 PTCH1Q13635 1447 aa23.58■■□□□ 1.36
LINC00475-203ENST00000417983 CCDC144AA2RUR9 1427 aa23.55■■□□□ 1.36
LINC00475-203ENST00000417983 SETD5Q9C0A6 1442 aa23.55■■□□□ 1.36
LINC00475-203ENST00000417983 NALCNQ8IZF0 1738 aa23.53■■□□□ 1.36
LINC00475-203ENST00000417983 NHSL1Q5SYE7 1610 aa23.52■■□□□ 1.36
LINC00475-203ENST00000417983 ROBO2Q9HCK4 1378 aa23.51■■□□□ 1.35
LINC00475-203ENST00000417983 C1orf167Q5SNV9 1468 aa23.5■■□□□ 1.35
LINC00475-203ENST00000417983 NCBP3Q53F19 620 aaKnown RBP23.5■■□□□ 1.35
LINC00475-203ENST00000417983 ACIN1Q9UKV3 1341 aaKnown RBP23.5■■□□□ 1.35
LINC00475-203ENST00000417983 PPLO60437 1756 aa23.5■■□□□ 1.35
LINC00475-203ENST00000417983 RGL3Q3MIN7 710 aa23.49■■□□□ 1.35
LINC00475-203ENST00000417983 RXRBP28702 533 aa23.48■■□□□ 1.35
LINC00475-203ENST00000417983 DDX17Q92841 729 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms