RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 NEXMIFQ5QGS0 1516 aa23.89■■□□□ 1.41
CALD1-204ENST00000417172 GPRASP1Q5JY77 1395 aa23.89■■□□□ 1.41
CALD1-204ENST00000417172 WASHC2AQ641Q2 1341 aa23.88■■□□□ 1.41
CALD1-204ENST00000417172 POLR1AO95602 1720 aaPredicted RBP23.88■■□□□ 1.41
CALD1-204ENST00000417172 NUTM2DQ5VT03 806 aaPredicted RBP23.88■■□□□ 1.41
CALD1-204ENST00000417172 MIER1Q8N108 512 aa23.86■■□□□ 1.41
CALD1-204ENST00000417172 NRXN1Q9ULB1 1477 aa23.86■■□□□ 1.41
CALD1-204ENST00000417172 C3P01024 1663 aa23.85■■□□□ 1.41
CALD1-204ENST00000417172 KIAA1210Q9ULL0 1709 aa23.85■■□□□ 1.41
CALD1-204ENST00000417172 STAC3Q96MF2 364 aa23.84■■□□□ 1.41
CALD1-204ENST00000417172 ST20-MTHFSA0A0A6YYL1 179 aa23.83■■□□□ 1.41
CALD1-204ENST00000417172 CEBPAP49715 358 aaPredicted RBP23.83■■□□□ 1.41
CALD1-204ENST00000417172 IQGAP1P46940 1657 aa23.83■■□□□ 1.4
CALD1-204ENST00000417172 CFAP70Q5T0N1 1121 aa23.82■■□□□ 1.4
CALD1-204ENST00000417172 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
CALD1-204ENST00000417172 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
CALD1-204ENST00000417172 PIK3C2GO75747 1445 aa23.8■■□□□ 1.4
CALD1-204ENST00000417172 CCDC7Q96M83 1385 aa23.8■■□□□ 1.4
CALD1-204ENST00000417172 RPGRIP1LQ68CZ1 1315 aa23.8■■□□□ 1.4
CALD1-204ENST00000417172 KIF7Q2M1P5 1343 aa23.79■■□□□ 1.4
CALD1-204ENST00000417172 TNRQ92752 1358 aa23.78■■□□□ 1.4
CALD1-204ENST00000417172 STAG3Q9UJ98 1225 aa23.78■■□□□ 1.4
CALD1-204ENST00000417172 A2ML1A8K2U0 1454 aa23.78■■□□□ 1.4
CALD1-204ENST00000417172 RIMS1Q86UR5 1692 aaKnown RBP23.77■■□□□ 1.4
CALD1-204ENST00000417172 UBR1Q8IWV7 1749 aa23.72■■□□□ 1.39
CALD1-204ENST00000417172 SCAF11Q99590 1463 aaKnown RBP23.72■■□□□ 1.39
CALD1-204ENST00000417172 VGFO15240 615 aaPredicted RBP23.72■■□□□ 1.39
CALD1-204ENST00000417172 POLR3GLQ9BT43 218 aa23.72■■□□□ 1.39
CALD1-204ENST00000417172 ADAMTSL3P82987 1691 aa23.7■■□□□ 1.38
CALD1-204ENST00000417172 ADGRB1O14514 1584 aa23.7■■□□□ 1.38
CALD1-204ENST00000417172 SETBP1Q9Y6X0 1596 aa23.7■■□□□ 1.38
CALD1-204ENST00000417172 C14orf93Q9H972 538 aaKnown RBP23.69■■□□□ 1.38
CALD1-204ENST00000417172 ZFYVE9O95405 1425 aa23.69■■□□□ 1.38
CALD1-204ENST00000417172 TMEM132EQ6IEE7 984 aa23.69■■□□□ 1.38
CALD1-204ENST00000417172 TESK2Q96S53 571 aa23.69■■□□□ 1.38
CALD1-204ENST00000417172 RIMS2Q9UQ26 1411 aa23.68■■□□□ 1.38
CALD1-204ENST00000417172 DISP3Q9P2K9 1392 aa23.66■■□□□ 1.38
CALD1-204ENST00000417172 KDM5AP29375 1690 aaKnown RBP23.66■■□□□ 1.38
CALD1-204ENST00000417172 ASXL1Q8IXJ9 1541 aa23.65■■□□□ 1.38
CALD1-204ENST00000417172 MYO3AQ8NEV4 1616 aa23.63■■□□□ 1.37
CALD1-204ENST00000417172 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
CALD1-204ENST00000417172 TRAK1Q9UPV9 953 aa23.61■■□□□ 1.37
CALD1-204ENST00000417172 ALKQ9UM73 1620 aa23.6■■□□□ 1.37
CALD1-204ENST00000417172 NRXN3Q9Y4C0 1643 aa23.59■■□□□ 1.37
CALD1-204ENST00000417172 SETD1AO15047 1707 aaKnown RBP23.59■■□□□ 1.37
CALD1-204ENST00000417172 ARHGEF28Q8N1W1 1705 aaKnown RBP23.59■■□□□ 1.37
CALD1-204ENST00000417172 EIF3AQ14152 1382 aaKnown RBP23.59■■□□□ 1.37
CALD1-204ENST00000417172 TMEM2Q9UHN6 1383 aa23.57■■□□□ 1.36
CALD1-204ENST00000417172 QRICH2Q9H0J4 1663 aa23.57■■□□□ 1.36
CALD1-204ENST00000417172 PTPRMP28827 1452 aa23.57■■□□□ 1.36
CALD1-204ENST00000417172 TMF1P82094 1093 aa23.54■■□□□ 1.36
CALD1-204ENST00000417172 ANP32CO43423 234 aa23.53■■□□□ 1.36
CALD1-204ENST00000417172 STK26Q9P289 416 aa23.53■■□□□ 1.36
CALD1-204ENST00000417172 CEP170BQ9Y4F5 1589 aaPredicted RBP23.51■■□□□ 1.35
CALD1-204ENST00000417172 LTKP29376 864 aa23.51■■□□□ 1.35
CALD1-204ENST00000417172 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.51■■□□□ 1.35
CALD1-204ENST00000417172 CENPJQ9HC77 1338 aaPredicted RBP23.51■■□□□ 1.35
CALD1-204ENST00000417172 YTHDC2Q9H6S0 1430 aaKnown RBP23.49■■□□□ 1.35
CALD1-204ENST00000417172 MYOM1P52179 1685 aa23.47■■□□□ 1.35
CALD1-204ENST00000417172 SLIT1O75093 1534 aa23.47■■□□□ 1.35
CALD1-204ENST00000417172 ARHGAP23Q9P227 1491 aa23.46■■□□□ 1.35
CALD1-204ENST00000417172 CNGB1Q14028 1251 aaPredicted RBP23.46■■□□□ 1.35
CALD1-204ENST00000417172 ZNF142P52746 1687 aaPredicted RBP23.45■■□□□ 1.35
CALD1-204ENST00000417172 SAFB2Q14151 953 aaKnown RBP eCLIP23.45■■□□□ 1.35
CALD1-204ENST00000417172 METP08581 1390 aa23.45■■□□□ 1.34
CALD1-204ENST00000417172 TXNDC2Q86VQ3 553 aa23.45■■□□□ 1.34
CALD1-204ENST00000417172 BCANQ96GW7 911 aa23.45■■□□□ 1.34
CALD1-204ENST00000417172 YTHDC1Q96MU7 727 aaKnown RBP23.44■■□□□ 1.34
CALD1-204ENST00000417172 SBNO2Q9Y2G9 1366 aa23.44■■□□□ 1.34
CALD1-204ENST00000417172 HDGFP51858 240 aaKnown RBP23.43■■□□□ 1.34
CALD1-204ENST00000417172 SETD1BQ9UPS6 1966 aaKnown RBP23.43■■□□□ 1.34
CALD1-204ENST00000417172 ADAMTS13Q76LX8 1427 aa23.41■■□□□ 1.34
CALD1-204ENST00000417172 THEMISQ8N1K5 641 aaPredicted RBP23.41■■□□□ 1.34
CALD1-204ENST00000417172 PLEKHG1Q9ULL1 1385 aa23.41■■□□□ 1.34
CALD1-204ENST00000417172 TULP4Q9NRJ4 1543 aa23.4■■□□□ 1.34
CALD1-204ENST00000417172 PRAM1Q96QH2 718 aa23.39■■□□□ 1.34
CALD1-204ENST00000417172 EID1Q9Y6B2 187 aa23.39■■□□□ 1.34
CALD1-204ENST00000417172 PRKRIP1Q9H875 184 aaPredicted RBP23.39■■□□□ 1.33
CALD1-204ENST00000417172 LRPPRCP42704 1394 aaKnown RBP23.38■■□□□ 1.33
CALD1-204ENST00000417172 PANK3Q9H999 370 aa23.37■■□□□ 1.33
CALD1-204ENST00000417172 SLC26A8Q96RN1 970 aa23.37■■□□□ 1.33
CALD1-204ENST00000417172 CDCA8Q53HL2 280 aa23.36■■□□□ 1.33
CALD1-204ENST00000417172 PLEKHH1Q9ULM0 1364 aa23.36■■□□□ 1.33
CALD1-204ENST00000417172 KNDC1Q76NI1 1749 aa23.35■■□□□ 1.33
CALD1-204ENST00000417172 DLC1Q96QB1 1528 aa23.35■■□□□ 1.33
CALD1-204ENST00000417172 MINK1Q8N4C8 1332 aaPredicted RBP23.35■■□□□ 1.33
CALD1-204ENST00000417172 WAPLQ7Z5K2 1190 aa23.34■■□□□ 1.33
CALD1-204ENST00000417172 POGKQ9P215 609 aa23.34■■□□□ 1.33
CALD1-204ENST00000417172 MED14O60244 1454 aa23.34■■□□□ 1.33
CALD1-204ENST00000417172 CCER2I3L3R5 266 aa23.33■■□□□ 1.32
CALD1-204ENST00000417172 PER1O15534 1290 aaPredicted RBP23.33■■□□□ 1.32
CALD1-204ENST00000417172 ABCC11Q96J66 1382 aa23.32■■□□□ 1.32
CALD1-204ENST00000417172 SLC24A1O60721 1099 aa23.31■■□□□ 1.32
CALD1-204ENST00000417172 CCDC184Q52MB2 194 aa23.31■■□□□ 1.32
CALD1-204ENST00000417172 CPS1P31327 1500 aa23.3■■□□□ 1.32
CALD1-204ENST00000417172 PTPRUQ92729 1446 aa23.29■■□□□ 1.32
CALD1-204ENST00000417172 EVC2Q86UK5 1308 aa23.29■■□□□ 1.32
CALD1-204ENST00000417172 CABP2Q9NPB3 220 aa23.29■■□□□ 1.32
CALD1-204ENST00000417172 TECPR2O15040 1411 aa23.27■■□□□ 1.32
CALD1-204ENST00000417172 ROBO2Q9HCK4 1378 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms