RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
MDC1-203ENST00000417033 CLSPNQ9HAW4 1339 aa11.75□□□□□ -0.53
MDC1-203ENST00000417033 TMEM131LA2VDJ0 1609 aa11.73□□□□□ -0.53
MDC1-203ENST00000417033 RGL3Q3MIN7 710 aa11.73□□□□□ -0.53
MDC1-203ENST00000417033 NLRP1Q9C000 1473 aa11.73□□□□□ -0.53
MDC1-203ENST00000417033 SLC52A1Q9NWF4 448 aa11.73□□□□□ -0.53
MDC1-203ENST00000417033 MYO5BQ9ULV0 1848 aa11.72□□□□□ -0.53
MDC1-203ENST00000417033 CEP170BQ9Y4F5 1589 aaPredicted RBP11.72□□□□□ -0.53
MDC1-203ENST00000417033 A2ML1A8K2U0 1454 aa11.72□□□□□ -0.53
MDC1-203ENST00000417033 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.54
MDC1-203ENST00000417033 UHRF1BP1Q6BDS2 1440 aa11.7□□□□□ -0.54
MDC1-203ENST00000417033 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
MDC1-203ENST00000417033 L3MBTL2Q969R5 705 aa11.7□□□□□ -0.54
MDC1-203ENST00000417033 ZNF142P52746 1687 aaPredicted RBP11.7□□□□□ -0.54
MDC1-203ENST00000417033 KIF1BO60333 1816 aa11.7□□□□□ -0.54
MDC1-203ENST00000417033 TONSLQ96HA7 1378 aa11.69□□□□□ -0.54
MDC1-203ENST00000417033 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
MDC1-203ENST00000417033 ZNF326Q5BKZ1 582 aaKnown RBP11.68□□□□□ -0.54
MDC1-203ENST00000417033 NEXMIFQ5QGS0 1516 aa11.68□□□□□ -0.54
MDC1-203ENST00000417033 LMTK3Q96Q04 1460 aa11.68□□□□□ -0.54
MDC1-203ENST00000417033 NEURL4Q96JN8 1562 aa11.67□□□□□ -0.54
MDC1-203ENST00000417033 HSPA2P54652 639 aa11.67□□□□□ -0.54
MDC1-203ENST00000417033 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
MDC1-203ENST00000417033 ZFYVE9O95405 1425 aa11.67□□□□□ -0.54
MDC1-203ENST00000417033 RIMS2Q9UQ26 1411 aa11.67□□□□□ -0.54
MDC1-203ENST00000417033 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
MDC1-203ENST00000417033 DCAF11Q8TEB1 546 aa11.66□□□□□ -0.54
MDC1-203ENST00000417033 KDM2AQ9Y2K7 1162 aa11.66□□□□□ -0.54
MDC1-203ENST00000417033 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
MDC1-203ENST00000417033 TMEM2Q9UHN6 1383 aa11.66□□□□□ -0.54
MDC1-203ENST00000417033 ADGRF5Q8IZF2 1346 aa11.65□□□□□ -0.54
MDC1-203ENST00000417033 ARHGAP23Q9P227 1491 aa11.65□□□□□ -0.54
MDC1-203ENST00000417033 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.55
MDC1-203ENST00000417033 PPLO60437 1756 aa11.64□□□□□ -0.55
MDC1-203ENST00000417033 LTKP29376 864 aa11.64□□□□□ -0.55
MDC1-203ENST00000417033 NBPF8Q3BBV2 869 aa11.64□□□□□ -0.55
MDC1-203ENST00000417033 SLIT1O75093 1534 aa11.64□□□□□ -0.55
MDC1-203ENST00000417033 MYOM2P54296 1465 aa11.63□□□□□ -0.55
MDC1-203ENST00000417033 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
MDC1-203ENST00000417033 RPGRIP1LQ68CZ1 1315 aa11.61□□□□□ -0.55
MDC1-203ENST00000417033 PRAG1Q86YV5 1406 aa11.61□□□□□ -0.55
MDC1-203ENST00000417033 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
MDC1-203ENST00000417033 NRXN1Q9ULB1 1477 aa11.61□□□□□ -0.55
MDC1-203ENST00000417033 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
MDC1-203ENST00000417033 SCAF11Q99590 1463 aaKnown RBP11.6□□□□□ -0.55
MDC1-203ENST00000417033 TXNDC2Q86VQ3 553 aa11.6□□□□□ -0.55
MDC1-203ENST00000417033 ZNF219Q9P2Y4 722 aaPredicted RBP11.6□□□□□ -0.55
MDC1-203ENST00000417033 PIK3C2GO75747 1445 aa11.6□□□□□ -0.55
MDC1-203ENST00000417033 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
MDC1-203ENST00000417033 NRXN3Q9Y4C0 1643 aa11.59□□□□□ -0.55
MDC1-203ENST00000417033 TIMELESSQ9UNS1 1208 aa11.58□□□□□ -0.56
MDC1-203ENST00000417033 ASXL1Q8IXJ9 1541 aa11.58□□□□□ -0.56
MDC1-203ENST00000417033 IQGAP1P46940 1657 aa11.58□□□□□ -0.56
MDC1-203ENST00000417033 PLEKHG1Q9ULL1 1385 aa11.57□□□□□ -0.56
MDC1-203ENST00000417033 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
MDC1-203ENST00000417033 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.57□□□□□ -0.56
MDC1-203ENST00000417033 ADAMTS13Q76LX8 1427 aa11.57□□□□□ -0.56
MDC1-203ENST00000417033 VGFO15240 615 aaPredicted RBP11.56□□□□□ -0.56
MDC1-203ENST00000417033 CAPN15O75808 1086 aa11.56□□□□□ -0.56
MDC1-203ENST00000417033 NBPF1Q3BBV0 1214 aa11.56□□□□□ -0.56
MDC1-203ENST00000417033 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
MDC1-203ENST00000417033 EID1Q9Y6B2 187 aa11.56□□□□□ -0.56
MDC1-203ENST00000417033 SETBP1Q9Y6X0 1596 aa11.56□□□□□ -0.56
MDC1-203ENST00000417033 POLR1AO95602 1720 aaPredicted RBP11.55□□□□□ -0.56
MDC1-203ENST00000417033 NPHP4O75161 1426 aaPredicted RBP11.55□□□□□ -0.56
MDC1-203ENST00000417033 STRCQ7RTU9 1775 aa11.55□□□□□ -0.56
MDC1-203ENST00000417033 SLC26A8Q96RN1 970 aa11.55□□□□□ -0.56
MDC1-203ENST00000417033 TRPM1Q7Z4N2 1603 aa11.55□□□□□ -0.56
MDC1-203ENST00000417033 ALKQ9UM73 1620 aa11.55□□□□□ -0.56
MDC1-203ENST00000417033 RALGAPBQ86X10 1494 aa11.55□□□□□ -0.56
MDC1-203ENST00000417033 SETD1AO15047 1707 aaKnown RBP11.55□□□□□ -0.56
MDC1-203ENST00000417033 ZEB1P37275 1124 aaPredicted RBP11.54□□□□□ -0.56
MDC1-203ENST00000417033 BCANQ96GW7 911 aa11.54□□□□□ -0.56
MDC1-203ENST00000417033 METP08581 1390 aa11.54□□□□□ -0.56
MDC1-203ENST00000417033 MED14O60244 1454 aa11.53□□□□□ -0.56
MDC1-203ENST00000417033 TMEM132EQ6IEE7 984 aa11.53□□□□□ -0.56
MDC1-203ENST00000417033 C14orf93Q9H972 538 aaKnown RBP11.53□□□□□ -0.56
MDC1-203ENST00000417033 ADGRB1O14514 1584 aa11.53□□□□□ -0.56
MDC1-203ENST00000417033 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.57
MDC1-203ENST00000417033 ROCK2O75116 1388 aaKnown RBP11.52□□□□□ -0.57
MDC1-203ENST00000417033 PTPRUQ92729 1446 aa11.52□□□□□ -0.57
MDC1-203ENST00000417033 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
MDC1-203ENST00000417033 GPRASP1Q5JY77 1395 aa11.5□□□□□ -0.57
MDC1-203ENST00000417033 LAMC1P11047 1609 aa11.49□□□□□ -0.57
MDC1-203ENST00000417033 KIAA1210Q9ULL0 1709 aa11.49□□□□□ -0.57
MDC1-203ENST00000417033 CARD11Q9BXL7 1154 aa11.48□□□□□ -0.57
MDC1-203ENST00000417033 STK26Q9P289 416 aa11.48□□□□□ -0.57
MDC1-203ENST00000417033 TBX22Q9Y458 520 aa11.48□□□□□ -0.57
MDC1-203ENST00000417033 DIP2AQ14689 1571 aa11.48□□□□□ -0.57
MDC1-203ENST00000417033 YTHDC2Q9H6S0 1430 aaKnown RBP11.47□□□□□ -0.57
MDC1-203ENST00000417033 LRPPRCP42704 1394 aaKnown RBP11.46□□□□□ -0.57
MDC1-203ENST00000417033 CACNB1Q02641 598 aaPredicted RBP11.46□□□□□ -0.57
MDC1-203ENST00000417033 TRAK1Q9UPV9 953 aa11.46□□□□□ -0.57
MDC1-203ENST00000417033 USP47Q96K76 1375 aa11.45□□□□□ -0.58
MDC1-203ENST00000417033 PLEKHH1Q9ULM0 1364 aa11.45□□□□□ -0.58
MDC1-203ENST00000417033 HIRIP3Q9BW71 556 aaPredicted RBP11.45□□□□□ -0.58
MDC1-203ENST00000417033 XRN1Q8IZH2 1706 aaKnown RBP11.45□□□□□ -0.58
MDC1-203ENST00000417033 ROBO2Q9HCK4 1378 aa11.44□□□□□ -0.58
MDC1-203ENST00000417033 ZNF335Q9H4Z2 1342 aaPredicted RBP11.44□□□□□ -0.58
MDC1-203ENST00000417033 HSPA5P11021 654 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms