RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 HDGFP51858 240 aaKnown RBP12.75□□□□□ -0.37
GTF3AP1-201ENST00000416942 SWT1Q5T5J6 900 aaKnown RBP12.75□□□□□ -0.37
GTF3AP1-201ENST00000416942 LRCH3Q96II8 777 aa12.74□□□□□ -0.37
GTF3AP1-201ENST00000416942 SOWAHBA6NEL2 793 aa12.73□□□□□ -0.37
GTF3AP1-201ENST00000416942 TRIM66O15016 1216 aa12.73□□□□□ -0.37
GTF3AP1-201ENST00000416942 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.73□□□□□ -0.37
GTF3AP1-201ENST00000416942 BCAMP50895 628 aa12.72□□□□□ -0.37
GTF3AP1-201ENST00000416942 THSD4Q6ZMP0 1018 aa12.72□□□□□ -0.37
GTF3AP1-201ENST00000416942 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
GTF3AP1-201ENST00000416942 AMHR2Q16671 573 aa12.7□□□□□ -0.38
GTF3AP1-201ENST00000416942 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
GTF3AP1-201ENST00000416942 RNF40O75150 1001 aa12.68□□□□□ -0.38
GTF3AP1-201ENST00000416942 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
GTF3AP1-201ENST00000416942 CLCN1P35523 988 aa12.67□□□□□ -0.38
GTF3AP1-201ENST00000416942 SLC4A3P48751 1232 aa12.67□□□□□ -0.38
GTF3AP1-201ENST00000416942 GPCPD1Q9NPB8 672 aa12.66□□□□□ -0.38
GTF3AP1-201ENST00000416942 HPS5Q9UPZ3 1129 aa12.66□□□□□ -0.38
GTF3AP1-201ENST00000416942 NACADO15069 1562 aa12.65□□□□□ -0.38
GTF3AP1-201ENST00000416942 PTPN5P54829 565 aa12.65□□□□□ -0.38
GTF3AP1-201ENST00000416942 PDE4DQ08499 809 aa12.65□□□□□ -0.38
GTF3AP1-201ENST00000416942 TTLL12Q14166 644 aaPredicted RBP12.65□□□□□ -0.38
GTF3AP1-201ENST00000416942 TMUB1Q9BVT8 246 aa12.65□□□□□ -0.38
GTF3AP1-201ENST00000416942 TSR3Q9UJK0 312 aaKnown RBP12.65□□□□□ -0.38
GTF3AP1-201ENST00000416942 REPIN1Q9BWE0 567 aaKnown RBP12.64□□□□□ -0.39
GTF3AP1-201ENST00000416942 CECR2Q9BXF3 1484 aa12.62□□□□□ -0.39
GTF3AP1-201ENST00000416942 PPP4CP60510 307 aa12.62□□□□□ -0.39
GTF3AP1-201ENST00000416942 PARP9Q8IXQ6 854 aa12.62□□□□□ -0.39
GTF3AP1-201ENST00000416942 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
GTF3AP1-201ENST00000416942 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
GTF3AP1-201ENST00000416942 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
GTF3AP1-201ENST00000416942 SULF1Q8IWU6 871 aa12.61□□□□□ -0.39
GTF3AP1-201ENST00000416942 SLC10A3P09131 477 aa12.6□□□□□ -0.39
GTF3AP1-201ENST00000416942 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
GTF3AP1-201ENST00000416942 HCSTQ9UBK5 93 aa12.6□□□□□ -0.39
GTF3AP1-201ENST00000416942 GIGYF2Q6Y7W6 1299 aaKnown RBP12.59□□□□□ -0.39
GTF3AP1-201ENST00000416942 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
GTF3AP1-201ENST00000416942 RSPH4AQ5TD94 716 aa12.58□□□□□ -0.4
GTF3AP1-201ENST00000416942 RDH13Q8NBN7 331 aa12.58□□□□□ -0.4
GTF3AP1-201ENST00000416942 BICRAQ9NZM4 1560 aa12.57□□□□□ -0.4
GTF3AP1-201ENST00000416942 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
GTF3AP1-201ENST00000416942 UNC13AQ9UPW8 1703 aa12.56□□□□□ -0.4
GTF3AP1-201ENST00000416942 CD46P15529 392 aa12.55□□□□□ -0.4
GTF3AP1-201ENST00000416942 NYAP1Q6ZVC0 841 aa12.55□□□□□ -0.4
GTF3AP1-201ENST00000416942 CFHP08603 1231 aa12.54□□□□□ -0.4
GTF3AP1-201ENST00000416942 APLP1P51693 650 aa12.53□□□□□ -0.4
GTF3AP1-201ENST00000416942 GPBP1L1Q9HC44 474 aaPredicted RBP12.53□□□□□ -0.4
GTF3AP1-201ENST00000416942 MS4A1P11836 297 aa12.51□□□□□ -0.41
GTF3AP1-201ENST00000416942 KMT5BQ4FZB7 885 aa12.51□□□□□ -0.41
GTF3AP1-201ENST00000416942 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
GTF3AP1-201ENST00000416942 GCGRP47871 477 aa12.5□□□□□ -0.41
GTF3AP1-201ENST00000416942 PRR14Q9BWN1 585 aa12.5□□□□□ -0.41
GTF3AP1-201ENST00000416942 KDM4CQ9H3R0 1056 aa12.5□□□□□ -0.41
GTF3AP1-201ENST00000416942 BRPF1P55201 1214 aaPredicted RBP12.49□□□□□ -0.41
GTF3AP1-201ENST00000416942 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
GTF3AP1-201ENST00000416942 ACTN4O43707 911 aaKnown RBP12.47□□□□□ -0.41
GTF3AP1-201ENST00000416942 BEGAINQ9BUH8 593 aa12.46□□□□□ -0.41
GTF3AP1-201ENST00000416942 KDM4AO75164 1064 aa12.43□□□□□ -0.42
GTF3AP1-201ENST00000416942 FUT2Q10981 343 aa12.43□□□□□ -0.42
GTF3AP1-201ENST00000416942 PCDHB3Q9Y5E6 796 aa12.43□□□□□ -0.42
GTF3AP1-201ENST00000416942 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
GTF3AP1-201ENST00000416942 FAM117AQ9C073 453 aa12.4□□□□□ -0.42
GTF3AP1-201ENST00000416942 ATP6V1AP38606 617 aa12.39□□□□□ -0.43
GTF3AP1-201ENST00000416942 USP46P62068 366 aa12.39□□□□□ -0.43
GTF3AP1-201ENST00000416942 PUS10Q3MIT2 529 aaKnown RBP12.39□□□□□ -0.43
GTF3AP1-201ENST00000416942 BLOC1S3Q6QNY0 202 aa12.39□□□□□ -0.43
GTF3AP1-201ENST00000416942 SPIRE2Q8WWL2 714 aa12.39□□□□□ -0.43
GTF3AP1-201ENST00000416942 MTRQ99707 1265 aa12.39□□□□□ -0.43
GTF3AP1-201ENST00000416942 COPS2P61201 443 aa12.38□□□□□ -0.43
GTF3AP1-201ENST00000416942 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
GTF3AP1-201ENST00000416942 GRIPAP1Q4V328 841 aa12.37□□□□□ -0.43
GTF3AP1-201ENST00000416942 DDRGK1Q96HY6 314 aa12.37□□□□□ -0.43
GTF3AP1-201ENST00000416942 HOXA2O43364 376 aa12.36□□□□□ -0.43
GTF3AP1-201ENST00000416942 ITGBL1O95965 494 aaPredicted RBP12.36□□□□□ -0.43
GTF3AP1-201ENST00000416942 MORN1Q5T089 497 aa12.36□□□□□ -0.43
GTF3AP1-201ENST00000416942 TBC1D2Q9BYX2 928 aa12.36□□□□□ -0.43
GTF3AP1-201ENST00000416942 IL21Q9HBE4 155 aa12.36□□□□□ -0.43
GTF3AP1-201ENST00000416942 DIXDC1Q155Q3 683 aa12.35□□□□□ -0.43
GTF3AP1-201ENST00000416942 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
GTF3AP1-201ENST00000416942 NR1I2O75469 434 aa12.33□□□□□ -0.44
GTF3AP1-201ENST00000416942 HLA-CQ95604 372 aa12.33□□□□□ -0.44
GTF3AP1-201ENST00000416942 EIF4G1Q04637 1599 aaKnown RBP12.32□□□□□ -0.44
GTF3AP1-201ENST00000416942 KCNC4Q03721 635 aa12.32□□□□□ -0.44
GTF3AP1-201ENST00000416942 ZNF516Q92618 1163 aa12.32□□□□□ -0.44
GTF3AP1-201ENST00000416942 MOXD2PA6NHM9 499 aa12.31□□□□□ -0.44
GTF3AP1-201ENST00000416942 ZPR1O75312 459 aa12.31□□□□□ -0.44
GTF3AP1-201ENST00000416942 SCUBE3Q8IX30 993 aa12.31□□□□□ -0.44
GTF3AP1-201ENST00000416942 SLC27A5Q9Y2P5 690 aa12.31□□□□□ -0.44
GTF3AP1-201ENST00000416942 NDUFV2P19404 249 aa12.3□□□□□ -0.44
GTF3AP1-201ENST00000416942 GUCA2AQ02747 115 aa12.3□□□□□ -0.44
GTF3AP1-201ENST00000416942 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
GTF3AP1-201ENST00000416942 IL27Q8NEV9 243 aa12.3□□□□□ -0.44
GTF3AP1-201ENST00000416942 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
GTF3AP1-201ENST00000416942 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
GTF3AP1-201ENST00000416942 FDX1P10109 184 aa12.28□□□□□ -0.44
GTF3AP1-201ENST00000416942 RSBN1LQ6PCB5 846 aaPredicted RBP12.27□□□□□ -0.45
GTF3AP1-201ENST00000416942 TLL1O43897 1013 aa12.26□□□□□ -0.45
GTF3AP1-201ENST00000416942 SPTLC1O15269 473 aa12.25□□□□□ -0.45
GTF3AP1-201ENST00000416942 GJA5P36382 358 aa12.25□□□□□ -0.45
GTF3AP1-201ENST00000416942 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
GTF3AP1-201ENST00000416942 IFFO2Q5TF58 517 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms