RNA–Protein interactions for RNA: ENST00000416789.1

ITGA6-205, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-205ENST00000416789 NOS1P29475 1434 aa12.79□□□□□ -0.36
ITGA6-205ENST00000416789 SLC52A1Q9NWF4 448 aa12.78□□□□□ -0.36
ITGA6-205ENST00000416789 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
ITGA6-205ENST00000416789 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.36
ITGA6-205ENST00000416789 UBR1Q8IWV7 1749 aa12.77□□□□□ -0.36
ITGA6-205ENST00000416789 STRCQ7RTU9 1775 aa12.77□□□□□ -0.36
ITGA6-205ENST00000416789 PKD2Q13563 968 aa12.77□□□□□ -0.37
ITGA6-205ENST00000416789 THEMISQ8N1K5 641 aaPredicted RBP12.77□□□□□ -0.37
ITGA6-205ENST00000416789 SETD5Q9C0A6 1442 aa12.77□□□□□ -0.37
ITGA6-205ENST00000416789 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
ITGA6-205ENST00000416789 SPHKAPQ2M3C7 1700 aa12.76□□□□□ -0.37
ITGA6-205ENST00000416789 PIK3C2BO00750 1634 aa12.75□□□□□ -0.37
ITGA6-205ENST00000416789 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
ITGA6-205ENST00000416789 PTPRTO14522 1441 aa12.74□□□□□ -0.37
ITGA6-205ENST00000416789 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
ITGA6-205ENST00000416789 SYNMO15061 1565 aa12.73□□□□□ -0.37
ITGA6-205ENST00000416789 KIF1BO60333 1816 aa12.72□□□□□ -0.37
ITGA6-205ENST00000416789 TRIM52Q96A61 297 aa12.71□□□□□ -0.37
ITGA6-205ENST00000416789 ADGRB3O60242 1522 aa12.71□□□□□ -0.38
ITGA6-205ENST00000416789 SLIT1O75093 1534 aa12.71□□□□□ -0.38
ITGA6-205ENST00000416789 HDGFP51858 240 aaKnown RBP12.7□□□□□ -0.38
ITGA6-205ENST00000416789 HSPA2P54652 639 aa12.7□□□□□ -0.38
ITGA6-205ENST00000416789 TRPM2O94759 1503 aa12.7□□□□□ -0.38
ITGA6-205ENST00000416789 ANKLE2Q86XL3 938 aa12.69□□□□□ -0.38
ITGA6-205ENST00000416789 MED14O60244 1454 aa12.69□□□□□ -0.38
ITGA6-205ENST00000416789 ARHGAP23Q9P227 1491 aa12.69□□□□□ -0.38
ITGA6-205ENST00000416789 MYO5BQ9ULV0 1848 aa12.69□□□□□ -0.38
ITGA6-205ENST00000416789 IDI1Q13907 227 aa12.68□□□□□ -0.38
ITGA6-205ENST00000416789 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
ITGA6-205ENST00000416789 TMEM131LA2VDJ0 1609 aa12.68□□□□□ -0.38
ITGA6-205ENST00000416789 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
ITGA6-205ENST00000416789 RAB3GAP2Q9H2M9 1393 aa12.67□□□□□ -0.38
ITGA6-205ENST00000416789 POTEHQ6S545 545 aa12.66□□□□□ -0.38
ITGA6-205ENST00000416789 EID1Q9Y6B2 187 aa12.66□□□□□ -0.38
ITGA6-205ENST00000416789 IQGAP1P46940 1657 aa12.66□□□□□ -0.38
ITGA6-205ENST00000416789 NEURL4Q96JN8 1562 aa12.65□□□□□ -0.38
ITGA6-205ENST00000416789 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
ITGA6-205ENST00000416789 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
ITGA6-205ENST00000416789 TMEM2Q9UHN6 1383 aa12.65□□□□□ -0.38
ITGA6-205ENST00000416789 SCAF11Q99590 1463 aaKnown RBP12.65□□□□□ -0.38
ITGA6-205ENST00000416789 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
ITGA6-205ENST00000416789 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.64□□□□□ -0.39
ITGA6-205ENST00000416789 CLTCL1P53675 1640 aa12.62□□□□□ -0.39
ITGA6-205ENST00000416789 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
ITGA6-205ENST00000416789 NPHP4O75161 1426 aaPredicted RBP12.62□□□□□ -0.39
ITGA6-205ENST00000416789 NCKAP5LQ9HCH0 1330 aa12.61□□□□□ -0.39
ITGA6-205ENST00000416789 IQSEC2Q5JU85 1478 aa12.6□□□□□ -0.39
ITGA6-205ENST00000416789 TXNDC2Q86VQ3 553 aa12.6□□□□□ -0.39
ITGA6-205ENST00000416789 CCDC144AA2RUR9 1427 aa12.6□□□□□ -0.39
ITGA6-205ENST00000416789 ZFYVE9O95405 1425 aa12.6□□□□□ -0.39
ITGA6-205ENST00000416789 RPGRIP1LQ68CZ1 1315 aa12.6□□□□□ -0.39
ITGA6-205ENST00000416789 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
ITGA6-205ENST00000416789 DIP2AQ14689 1571 aa12.59□□□□□ -0.39
ITGA6-205ENST00000416789 CPS1P31327 1500 aa12.57□□□□□ -0.4
ITGA6-205ENST00000416789 PLEKHG1Q9ULL1 1385 aa12.57□□□□□ -0.4
ITGA6-205ENST00000416789 RIMS2Q9UQ26 1411 aa12.57□□□□□ -0.4
ITGA6-205ENST00000416789 PPLO60437 1756 aa12.57□□□□□ -0.4
ITGA6-205ENST00000416789 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
ITGA6-205ENST00000416789 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
ITGA6-205ENST00000416789 IFT172Q9UG01 1749 aa12.54□□□□□ -0.4
ITGA6-205ENST00000416789 NEXMIFQ5QGS0 1516 aa12.54□□□□□ -0.4
ITGA6-205ENST00000416789 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
ITGA6-205ENST00000416789 LTKP29376 864 aa12.54□□□□□ -0.4
ITGA6-205ENST00000416789 LTBP4Q8N2S1 1624 aa12.54□□□□□ -0.4
ITGA6-205ENST00000416789 PIK3R4Q99570 1358 aa12.54□□□□□ -0.4
ITGA6-205ENST00000416789 CHD2O14647 1828 aaKnown RBP12.53□□□□□ -0.4
ITGA6-205ENST00000416789 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
ITGA6-205ENST00000416789 VGFO15240 615 aaPredicted RBP12.53□□□□□ -0.4
ITGA6-205ENST00000416789 ANKRD30BQ9BXX2 1392 aa12.53□□□□□ -0.4
ITGA6-205ENST00000416789 ZNF326Q5BKZ1 582 aaKnown RBP12.52□□□□□ -0.41
ITGA6-205ENST00000416789 TBX22Q9Y458 520 aa12.52□□□□□ -0.41
ITGA6-205ENST00000416789 SPATA31E1Q6ZUB1 1445 aa12.51□□□□□ -0.41
ITGA6-205ENST00000416789 NWD1Q149M9 1564 aa12.51□□□□□ -0.41
ITGA6-205ENST00000416789 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
ITGA6-205ENST00000416789 NKTRP30414 1462 aaKnown RBP12.49□□□□□ -0.41
ITGA6-205ENST00000416789 CERKQ8TCT0 537 aa12.49□□□□□ -0.41
ITGA6-205ENST00000416789 LAMC1P11047 1609 aa12.48□□□□□ -0.41
ITGA6-205ENST00000416789 KCNA6P17658 529 aa12.48□□□□□ -0.41
ITGA6-205ENST00000416789 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
ITGA6-205ENST00000416789 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
ITGA6-205ENST00000416789 NRXN3Q9Y4C0 1643 aa12.48□□□□□ -0.41
ITGA6-205ENST00000416789 ZNF335Q9H4Z2 1342 aaPredicted RBP12.47□□□□□ -0.41
ITGA6-205ENST00000416789 BCANQ96GW7 911 aa12.47□□□□□ -0.41
ITGA6-205ENST00000416789 MYOM2P54296 1465 aa12.46□□□□□ -0.41
ITGA6-205ENST00000416789 ADAMTS13Q76LX8 1427 aa12.46□□□□□ -0.41
ITGA6-205ENST00000416789 NCOA3Q9Y6Q9 1424 aa12.46□□□□□ -0.41
ITGA6-205ENST00000416789 SETD1AO15047 1707 aaKnown RBP12.45□□□□□ -0.42
ITGA6-205ENST00000416789 FBXO41Q8TF61 875 aa12.44□□□□□ -0.42
ITGA6-205ENST00000416789 NRXN1Q9ULB1 1477 aa12.43□□□□□ -0.42
ITGA6-205ENST00000416789 PRR29P0C7W0 189 aa12.43□□□□□ -0.42
ITGA6-205ENST00000416789 XIRP1Q702N8 1843 aaKnown RBP12.43□□□□□ -0.42
ITGA6-205ENST00000416789 ALKQ9UM73 1620 aa12.43□□□□□ -0.42
ITGA6-205ENST00000416789 PRAG1Q86YV5 1406 aa12.43□□□□□ -0.42
ITGA6-205ENST00000416789 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
ITGA6-205ENST00000416789 LRRC7Q96NW7 1537 aa12.42□□□□□ -0.42
ITGA6-205ENST00000416789 SLC26A8Q96RN1 970 aa12.42□□□□□ -0.42
ITGA6-205ENST00000416789 KIAA1210Q9ULL0 1709 aa12.42□□□□□ -0.42
ITGA6-205ENST00000416789 PIK3C2GO75747 1445 aa12.41□□□□□ -0.42
ITGA6-205ENST00000416789 DHX57Q6P158 1386 aaKnown RBP12.41□□□□□ -0.42
ITGA6-205ENST00000416789 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms