RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 ST20-MTHFSA0A0A6YYL1 179 aa25.21■■□□□ 1.63
RTN4R-202ENST00000416372 PPLO60437 1756 aa25.21■■□□□ 1.63
RTN4R-202ENST00000416372 KIAA1210Q9ULL0 1709 aa25.2■■□□□ 1.62
RTN4R-202ENST00000416372 KIF7Q2M1P5 1343 aa25.19■■□□□ 1.62
RTN4R-202ENST00000416372 ADGRF5Q8IZF2 1346 aa25.19■■□□□ 1.62
RTN4R-202ENST00000416372 NRXN1Q9ULB1 1477 aa25.17■■□□□ 1.62
RTN4R-202ENST00000416372 SPATA31D1Q6ZQQ2 1576 aa25.16■■□□□ 1.62
RTN4R-202ENST00000416372 ZMYM3Q14202 1370 aa25.16■■□□□ 1.62
RTN4R-202ENST00000416372 TMEM131LA2VDJ0 1609 aa25.14■■□□□ 1.61
RTN4R-202ENST00000416372 MYO5BQ9ULV0 1848 aa25.12■■□□□ 1.61
RTN4R-202ENST00000416372 CFAP70Q5T0N1 1121 aa25.12■■□□□ 1.61
RTN4R-202ENST00000416372 IQGAP1P46940 1657 aa25.12■■□□□ 1.61
RTN4R-202ENST00000416372 NEXMIFQ5QGS0 1516 aa25.12■■□□□ 1.61
RTN4R-202ENST00000416372 ANP32CO43423 234 aa25.1■■□□□ 1.61
RTN4R-202ENST00000416372 VGFO15240 615 aaPredicted RBP25.1■■□□□ 1.61
RTN4R-202ENST00000416372 POLR3GLQ9BT43 218 aa25.1■■□□□ 1.61
RTN4R-202ENST00000416372 SCAF11Q99590 1463 aaKnown RBP25.09■■□□□ 1.61
RTN4R-202ENST00000416372 STAG3Q9UJ98 1225 aa25.09■■□□□ 1.61
RTN4R-202ENST00000416372 PIK3C2GO75747 1445 aa25.08■■□□□ 1.61
RTN4R-202ENST00000416372 NUTM2DQ5VT03 806 aaPredicted RBP25.05■■□□□ 1.6
RTN4R-202ENST00000416372 C14orf93Q9H972 538 aaKnown RBP25.04■■□□□ 1.6
RTN4R-202ENST00000416372 ZFYVE9O95405 1425 aa25.04■■□□□ 1.6
RTN4R-202ENST00000416372 TESK2Q96S53 571 aa25.03■■□□□ 1.6
RTN4R-202ENST00000416372 SETBP1Q9Y6X0 1596 aa25.03■■□□□ 1.6
RTN4R-202ENST00000416372 EIF3AQ14152 1382 aaKnown RBP25.03■■□□□ 1.6
RTN4R-202ENST00000416372 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
RTN4R-202ENST00000416372 TNRQ92752 1358 aa25.01■■□□□ 1.59
RTN4R-202ENST00000416372 FER1L4A9Z1Z3 1794 aa25■■□□□ 1.59
RTN4R-202ENST00000416372 A2ML1A8K2U0 1454 aa25■■□□□ 1.59
RTN4R-202ENST00000416372 TMF1P82094 1093 aa24.99■■□□□ 1.59
RTN4R-202ENST00000416372 DISP3Q9P2K9 1392 aa24.96■■□□□ 1.59
RTN4R-202ENST00000416372 YTHDC1Q96MU7 727 aaKnown RBP24.96■■□□□ 1.59
RTN4R-202ENST00000416372 ADGRB1O14514 1584 aa24.95■■□□□ 1.58
RTN4R-202ENST00000416372 C3P01024 1663 aa24.94■■□□□ 1.58
RTN4R-202ENST00000416372 CCER2I3L3R5 266 aa24.93■■□□□ 1.58
RTN4R-202ENST00000416372 CENPBP07199 599 aaPredicted RBP24.93■■□□□ 1.58
RTN4R-202ENST00000416372 CEBPAP49715 358 aaPredicted RBP24.93■■□□□ 1.58
RTN4R-202ENST00000416372 TMEM132EQ6IEE7 984 aa24.93■■□□□ 1.58
RTN4R-202ENST00000416372 RIMS2Q9UQ26 1411 aa24.92■■□□□ 1.58
RTN4R-202ENST00000416372 TRAK1Q9UPV9 953 aa24.9■■□□□ 1.58
RTN4R-202ENST00000416372 KDM5AP29375 1690 aaKnown RBP24.89■■□□□ 1.58
RTN4R-202ENST00000416372 MYO3AQ8NEV4 1616 aa24.89■■□□□ 1.58
RTN4R-202ENST00000416372 SLC24A1O60721 1099 aa24.89■■□□□ 1.57
RTN4R-202ENST00000416372 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
RTN4R-202ENST00000416372 CDCA8Q53HL2 280 aa24.88■■□□□ 1.57
RTN4R-202ENST00000416372 NLRP1Q9C000 1473 aa24.87■■□□□ 1.57
RTN4R-202ENST00000416372 PLPPR3Q6T4P5 718 aa24.87■■□□□ 1.57
RTN4R-202ENST00000416372 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.87■■□□□ 1.57
RTN4R-202ENST00000416372 UBR1Q8IWV7 1749 aa24.86■■□□□ 1.57
RTN4R-202ENST00000416372 CENPJQ9HC77 1338 aaPredicted RBP24.86■■□□□ 1.57
RTN4R-202ENST00000416372 PRKRIP1Q9H875 184 aaPredicted RBP24.85■■□□□ 1.57
RTN4R-202ENST00000416372 HDGFP51858 240 aaKnown RBP24.84■■□□□ 1.57
RTN4R-202ENST00000416372 ALKQ9UM73 1620 aa24.84■■□□□ 1.57
RTN4R-202ENST00000416372 ASXL1Q8IXJ9 1541 aa24.83■■□□□ 1.56
RTN4R-202ENST00000416372 SBNO2Q9Y2G9 1366 aa24.82■■□□□ 1.56
RTN4R-202ENST00000416372 RIMS1Q86UR5 1692 aaKnown RBP24.81■■□□□ 1.56
RTN4R-202ENST00000416372 QRICH2Q9H0J4 1663 aa24.81■■□□□ 1.56
RTN4R-202ENST00000416372 ARHGEF28Q8N1W1 1705 aaKnown RBP24.8■■□□□ 1.56
RTN4R-202ENST00000416372 TMEM2Q9UHN6 1383 aa24.8■■□□□ 1.56
RTN4R-202ENST00000416372 AEBP2Q6ZN18 517 aaPredicted RBP24.79■■□□□ 1.56
RTN4R-202ENST00000416372 STK26Q9P289 416 aa24.78■■□□□ 1.56
RTN4R-202ENST00000416372 ADAMTSL3P82987 1691 aa24.77■■□□□ 1.56
RTN4R-202ENST00000416372 YTHDC2Q9H6S0 1430 aaKnown RBP24.76■■□□□ 1.55
RTN4R-202ENST00000416372 CNGB1Q14028 1251 aaPredicted RBP24.75■■□□□ 1.55
RTN4R-202ENST00000416372 PANK3Q9H999 370 aa24.75■■□□□ 1.55
RTN4R-202ENST00000416372 PTPRMP28827 1452 aa24.73■■□□□ 1.55
RTN4R-202ENST00000416372 SETD1AO15047 1707 aaKnown RBP24.73■■□□□ 1.55
RTN4R-202ENST00000416372 NRXN3Q9Y4C0 1643 aa24.73■■□□□ 1.55
RTN4R-202ENST00000416372 BCANQ96GW7 911 aa24.71■■□□□ 1.55
RTN4R-202ENST00000416372 MYOM1P52179 1685 aa24.71■■□□□ 1.55
RTN4R-202ENST00000416372 PER1O15534 1290 aaPredicted RBP24.7■■□□□ 1.55
RTN4R-202ENST00000416372 THEMISQ8N1K5 641 aaPredicted RBP24.68■■□□□ 1.54
RTN4R-202ENST00000416372 EID1Q9Y6B2 187 aa24.68■■□□□ 1.54
RTN4R-202ENST00000416372 TXNDC2Q86VQ3 553 aa24.67■■□□□ 1.54
RTN4R-202ENST00000416372 POGKQ9P215 609 aa24.67■■□□□ 1.54
RTN4R-202ENST00000416372 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
RTN4R-202ENST00000416372 KTN1Q86UP2 1357 aaKnown RBP24.67■■□□□ 1.54
RTN4R-202ENST00000416372 SLIT1O75093 1534 aa24.67■■□□□ 1.54
RTN4R-202ENST00000416372 SAFB2Q14151 953 aaKnown RBP eCLIP24.67■■□□□ 1.54
RTN4R-202ENST00000416372 PELP1Q8IZL8 1130 aaKnown RBP24.67■■□□□ 1.54
RTN4R-202ENST00000416372 PRAM1Q96QH2 718 aa24.67■■□□□ 1.54
RTN4R-202ENST00000416372 EVC2Q86UK5 1308 aa24.66■■□□□ 1.54
RTN4R-202ENST00000416372 LTKP29376 864 aa24.66■■□□□ 1.54
RTN4R-202ENST00000416372 PLEKHG1Q9ULL1 1385 aa24.66■■□□□ 1.54
RTN4R-202ENST00000416372 ARHGAP23Q9P227 1491 aa24.66■■□□□ 1.54
RTN4R-202ENST00000416372 RALBP1Q15311 655 aa24.65■■□□□ 1.54
RTN4R-202ENST00000416372 CCDC184Q52MB2 194 aa24.65■■□□□ 1.54
RTN4R-202ENST00000416372 MRS2Q9HD23 443 aa24.65■■□□□ 1.54
RTN4R-202ENST00000416372 DLC1Q96QB1 1528 aa24.64■■□□□ 1.54
RTN4R-202ENST00000416372 METP08581 1390 aa24.64■■□□□ 1.53
RTN4R-202ENST00000416372 CEP170BQ9Y4F5 1589 aaPredicted RBP24.64■■□□□ 1.53
RTN4R-202ENST00000416372 TULP4Q9NRJ4 1543 aa24.63■■□□□ 1.53
RTN4R-202ENST00000416372 ABCC11Q96J66 1382 aa24.62■■□□□ 1.53
RTN4R-202ENST00000416372 KNSTRNQ9Y448 316 aa24.62■■□□□ 1.53
RTN4R-202ENST00000416372 PUS7Q96PZ0 661 aaKnown RBP24.62■■□□□ 1.53
RTN4R-202ENST00000416372 MINK1Q8N4C8 1332 aaPredicted RBP24.6■■□□□ 1.53
RTN4R-202ENST00000416372 ADAMTS13Q76LX8 1427 aa24.6■■□□□ 1.53
RTN4R-202ENST00000416372 KDM4FA0A1W2PPD8 638 aa24.59■■□□□ 1.53
RTN4R-202ENST00000416372 CC2D1BQ5T0F9 858 aaKnown RBP24.59■■□□□ 1.53
RTN4R-202ENST00000416372 MYBBP1AQ9BQG0 1328 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms