RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 DHX29Q7Z478 1369 aaKnown RBP18.53■□□□□ 0.56
SSR4P1-201ENST00000415143 EIF2AK4Q9P2K8 1649 aaKnown RBP18.52■□□□□ 0.56
SSR4P1-201ENST00000415143 C11orf95C9JLR9 678 aaPredicted RBP18.52■□□□□ 0.56
SSR4P1-201ENST00000415143 PRAG1Q86YV5 1406 aa18.51■□□□□ 0.55
SSR4P1-201ENST00000415143 PRKRIP1Q9H875 184 aaPredicted RBP18.51■□□□□ 0.55
SSR4P1-201ENST00000415143 ALKQ9UM73 1620 aa18.5■□□□□ 0.55
SSR4P1-201ENST00000415143 RGS17Q9UGC6 210 aaPredicted RBP18.49■□□□□ 0.55
SSR4P1-201ENST00000415143 A2MP01023 1474 aa18.48■□□□□ 0.55
SSR4P1-201ENST00000415143 GPRASP1Q5JY77 1395 aa18.48■□□□□ 0.55
SSR4P1-201ENST00000415143 DEPDC5O75140 1603 aa18.48■□□□□ 0.55
SSR4P1-201ENST00000415143 LAMC1P11047 1609 aa18.48■□□□□ 0.55
SSR4P1-201ENST00000415143 RGL3Q3MIN7 710 aa18.47■□□□□ 0.55
SSR4P1-201ENST00000415143 KTN1Q86UP2 1357 aaKnown RBP18.46■□□□□ 0.55
SSR4P1-201ENST00000415143 TET3O43151 1660 aa18.45■□□□□ 0.54
SSR4P1-201ENST00000415143 NEFLP07196 543 aa18.45■□□□□ 0.54
SSR4P1-201ENST00000415143 NEURL4Q96JN8 1562 aa18.45■□□□□ 0.54
SSR4P1-201ENST00000415143 TRPM2O94759 1503 aa18.44■□□□□ 0.54
SSR4P1-201ENST00000415143 KIF3BO15066 747 aa18.44■□□□□ 0.54
SSR4P1-201ENST00000415143 TRPM1Q7Z4N2 1603 aa18.43■□□□□ 0.54
SSR4P1-201ENST00000415143 ST20-MTHFSA0A0A6YYL1 179 aa18.43■□□□□ 0.54
SSR4P1-201ENST00000415143 VWDEQ8N2E2 1590 aa18.42■□□□□ 0.54
SSR4P1-201ENST00000415143 A2ML1A8K2U0 1454 aa18.42■□□□□ 0.54
SSR4P1-201ENST00000415143 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
SSR4P1-201ENST00000415143 POLR3GLQ9BT43 218 aa18.42■□□□□ 0.54
SSR4P1-201ENST00000415143 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
SSR4P1-201ENST00000415143 PRDM15P57071 1507 aaPredicted RBP18.4■□□□□ 0.54
SSR4P1-201ENST00000415143 E9PCH4 1651 aa18.39■□□□□ 0.53
SSR4P1-201ENST00000415143 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.53
SSR4P1-201ENST00000415143 RALBP1Q15311 655 aa18.38■□□□□ 0.53
SSR4P1-201ENST00000415143 SETD1AO15047 1707 aaKnown RBP18.37■□□□□ 0.53
SSR4P1-201ENST00000415143 SPHKAPQ2M3C7 1700 aa18.37■□□□□ 0.53
SSR4P1-201ENST00000415143 CDCA8Q53HL2 280 aa18.37■□□□□ 0.53
SSR4P1-201ENST00000415143 GGT6Q6P531 493 aa18.37■□□□□ 0.53
SSR4P1-201ENST00000415143 POTEAQ6S8J7 498 aa18.37■□□□□ 0.53
SSR4P1-201ENST00000415143 LMTK2Q8IWU2 1503 aa18.37■□□□□ 0.53
SSR4P1-201ENST00000415143 TMF1P82094 1093 aa18.36■□□□□ 0.53
SSR4P1-201ENST00000415143 SUPT16HQ9Y5B9 1047 aaKnown RBP18.36■□□□□ 0.53
SSR4P1-201ENST00000415143 WASHC2CQ9Y4E1 1318 aa18.35■□□□□ 0.53
SSR4P1-201ENST00000415143 CEP152O94986 1710 aa18.35■□□□□ 0.53
SSR4P1-201ENST00000415143 RNF17Q9BXT8 1623 aaKnown RBP18.34■□□□□ 0.53
SSR4P1-201ENST00000415143 STRCP1A6NGW2 1772 aa18.32■□□□□ 0.52
SSR4P1-201ENST00000415143 EIF3AQ14152 1382 aaKnown RBP18.31■□□□□ 0.52
SSR4P1-201ENST00000415143 NBPF1Q3BBV0 1214 aa18.31■□□□□ 0.52
SSR4P1-201ENST00000415143 ANKLE2Q86XL3 938 aa18.31■□□□□ 0.52
SSR4P1-201ENST00000415143 EFCAB6Q5THR3 1501 aa18.3■□□□□ 0.52
SSR4P1-201ENST00000415143 LRRC7Q96NW7 1537 aa18.3■□□□□ 0.52
SSR4P1-201ENST00000415143 FAM9BQ8IZU0 186 aa18.3■□□□□ 0.52
SSR4P1-201ENST00000415143 NPHP4O75161 1426 aaPredicted RBP18.29■□□□□ 0.52
SSR4P1-201ENST00000415143 ZBED9Q6R2W3 1325 aa18.28■□□□□ 0.52
SSR4P1-201ENST00000415143 CLTCL1P53675 1640 aa18.28■□□□□ 0.52
SSR4P1-201ENST00000415143 MROH1Q8NDA8 1641 aa18.28■□□□□ 0.52
SSR4P1-201ENST00000415143 TNRQ92752 1358 aa18.28■□□□□ 0.52
SSR4P1-201ENST00000415143 MYBBP1AQ9BQG0 1328 aaKnown RBP18.27■□□□□ 0.52
SSR4P1-201ENST00000415143 SYNMO15061 1565 aa18.27■□□□□ 0.52
SSR4P1-201ENST00000415143 TMC1Q8TDI8 760 aa18.27■□□□□ 0.52
SSR4P1-201ENST00000415143 IQGAP1P46940 1657 aa18.27■□□□□ 0.52
SSR4P1-201ENST00000415143 BRD4O60885 1362 aaPredicted RBP18.27■□□□□ 0.51
SSR4P1-201ENST00000415143 MYOM2P54296 1465 aa18.26■□□□□ 0.51
SSR4P1-201ENST00000415143 KIAA1210Q9ULL0 1709 aa18.26■□□□□ 0.51
SSR4P1-201ENST00000415143 SCAF11Q99590 1463 aaKnown RBP18.26■□□□□ 0.51
SSR4P1-201ENST00000415143 RPGRIP1LQ68CZ1 1315 aa18.25■□□□□ 0.51
SSR4P1-201ENST00000415143 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
SSR4P1-201ENST00000415143 FBXO31Q5XUX0 539 aaPredicted RBP18.25■□□□□ 0.51
SSR4P1-201ENST00000415143 MED14O60244 1454 aa18.25■□□□□ 0.51
SSR4P1-201ENST00000415143 FKBP8Q14318 412 aa18.24■□□□□ 0.51
SSR4P1-201ENST00000415143 TESK2Q96S53 571 aa18.24■□□□□ 0.51
SSR4P1-201ENST00000415143 KIF1BO60333 1816 aa18.23■□□□□ 0.51
SSR4P1-201ENST00000415143 ZC3H13Q5T200 1668 aaKnown RBP18.23■□□□□ 0.51
SSR4P1-201ENST00000415143 THEMISQ8N1K5 641 aaPredicted RBP18.22■□□□□ 0.51
SSR4P1-201ENST00000415143 CCDC184Q52MB2 194 aa18.21■□□□□ 0.51
SSR4P1-201ENST00000415143 UGGT1Q9NYU2 1555 aa18.21■□□□□ 0.51
SSR4P1-201ENST00000415143 NLRP13Q86W25 1043 aa18.2■□□□□ 0.5
SSR4P1-201ENST00000415143 ABCC3O15438 1527 aa18.19■□□□□ 0.5
SSR4P1-201ENST00000415143 XIRP1Q702N8 1843 aaKnown RBP18.17■□□□□ 0.5
SSR4P1-201ENST00000415143 PARD3Q8TEW0 1356 aa18.17■□□□□ 0.5
SSR4P1-201ENST00000415143 ARHGAP31Q2M1Z3 1444 aa18.16■□□□□ 0.5
SSR4P1-201ENST00000415143 PNISRQ8TF01 805 aaKnown RBP18.16■□□□□ 0.5
SSR4P1-201ENST00000415143 UPF1Q92900 1129 aaKnown RBP eCLIP18.16■□□□□ 0.5
SSR4P1-201ENST00000415143 NLRP1Q9C000 1473 aa18.15■□□□□ 0.5
SSR4P1-201ENST00000415143 INSRP06213 1382 aa18.15■□□□□ 0.5
SSR4P1-201ENST00000415143 ADGRB3O60242 1522 aa18.14■□□□□ 0.49
SSR4P1-201ENST00000415143 PER1O15534 1290 aaPredicted RBP18.14■□□□□ 0.49
SSR4P1-201ENST00000415143 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
SSR4P1-201ENST00000415143 PANK3Q9H999 370 aa18.14■□□□□ 0.49
SSR4P1-201ENST00000415143 NRXN1Q9ULB1 1477 aa18.14■□□□□ 0.49
SSR4P1-201ENST00000415143 KNSTRNQ9Y448 316 aa18.13■□□□□ 0.49
SSR4P1-201ENST00000415143 SLC52A1Q9NWF4 448 aa18.12■□□□□ 0.49
SSR4P1-201ENST00000415143 FAM135BQ49AJ0 1406 aa18.12■□□□□ 0.49
SSR4P1-201ENST00000415143 CFAP65Q6ZU64 1925 aaKnown RBP18.11■□□□□ 0.49
SSR4P1-201ENST00000415143 VGFO15240 615 aaPredicted RBP18.11■□□□□ 0.49
SSR4P1-201ENST00000415143 CNGB1Q14028 1251 aaPredicted RBP18.11■□□□□ 0.49
SSR4P1-201ENST00000415143 SETBP1Q9Y6X0 1596 aa18.11■□□□□ 0.49
SSR4P1-201ENST00000415143 NOS1P29475 1434 aa18.1■□□□□ 0.49
SSR4P1-201ENST00000415143 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
SSR4P1-201ENST00000415143 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
SSR4P1-201ENST00000415143 ROBO1Q9Y6N7 1651 aa18.09■□□□□ 0.49
SSR4P1-201ENST00000415143 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
SSR4P1-201ENST00000415143 SBNO2Q9Y2G9 1366 aa18.09■□□□□ 0.49
SSR4P1-201ENST00000415143 ADGRF5Q8IZF2 1346 aa18.09■□□□□ 0.49
SSR4P1-201ENST00000415143 CFAP70Q5T0N1 1121 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms