RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ROBO1Q9Y6N7 1651 aa13.02□□□□□ -0.33
UPF3AP1-201ENST00000413731 MYO5BQ9ULV0 1848 aa13.02□□□□□ -0.33
UPF3AP1-201ENST00000413731 EFCAB6Q5THR3 1501 aa13.01□□□□□ -0.33
UPF3AP1-201ENST00000413731 NWD1Q149M9 1564 aa13□□□□□ -0.33
UPF3AP1-201ENST00000413731 ADGRB3O60242 1522 aa12.99□□□□□ -0.33
UPF3AP1-201ENST00000413731 LMTK2Q8IWU2 1503 aa12.99□□□□□ -0.33
UPF3AP1-201ENST00000413731 DAPK1P53355 1430 aa12.99□□□□□ -0.33
UPF3AP1-201ENST00000413731 TMEM2Q9UHN6 1383 aa12.99□□□□□ -0.33
UPF3AP1-201ENST00000413731 TXNDC2Q86VQ3 553 aa12.99□□□□□ -0.33
UPF3AP1-201ENST00000413731 SETD1AO15047 1707 aaKnown RBP12.98□□□□□ -0.33
UPF3AP1-201ENST00000413731 TET3O43151 1660 aa12.97□□□□□ -0.33
UPF3AP1-201ENST00000413731 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
UPF3AP1-201ENST00000413731 RGS17Q9UGC6 210 aaPredicted RBP12.97□□□□□ -0.33
UPF3AP1-201ENST00000413731 GCC2Q8IWJ2 1684 aa12.96□□□□□ -0.33
UPF3AP1-201ENST00000413731 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
UPF3AP1-201ENST00000413731 APLP2Q06481 763 aa12.96□□□□□ -0.33
UPF3AP1-201ENST00000413731 RRP7BPQ9NSQ0 103 aa12.96□□□□□ -0.33
UPF3AP1-201ENST00000413731 FGD6Q6ZV73 1430 aa12.96□□□□□ -0.34
UPF3AP1-201ENST00000413731 TMEM94Q12767 1356 aa12.95□□□□□ -0.34
UPF3AP1-201ENST00000413731 EID1Q9Y6B2 187 aa12.95□□□□□ -0.34
UPF3AP1-201ENST00000413731 PHLPP1O60346 1717 aa12.95□□□□□ -0.34
UPF3AP1-201ENST00000413731 NKTRP30414 1462 aaKnown RBP12.95□□□□□ -0.34
UPF3AP1-201ENST00000413731 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
UPF3AP1-201ENST00000413731 NOS1P29475 1434 aa12.94□□□□□ -0.34
UPF3AP1-201ENST00000413731 KANK1Q14678 1352 aa12.94□□□□□ -0.34
UPF3AP1-201ENST00000413731 CHD2O14647 1828 aaKnown RBP12.93□□□□□ -0.34
UPF3AP1-201ENST00000413731 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
UPF3AP1-201ENST00000413731 IDI1Q13907 227 aa12.91□□□□□ -0.34
UPF3AP1-201ENST00000413731 RBM33Q96EV2 1170 aaKnown RBP12.91□□□□□ -0.34
UPF3AP1-201ENST00000413731 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
UPF3AP1-201ENST00000413731 COL16A1Q07092 1604 aaPredicted RBP12.9□□□□□ -0.34
UPF3AP1-201ENST00000413731 ANKRD30AQ9BXX3 1397 aa12.9□□□□□ -0.34
UPF3AP1-201ENST00000413731 TMEM131LA2VDJ0 1609 aa12.89□□□□□ -0.35
UPF3AP1-201ENST00000413731 KCNA6P17658 529 aa12.89□□□□□ -0.35
UPF3AP1-201ENST00000413731 SLC26A8Q96RN1 970 aa12.89□□□□□ -0.35
UPF3AP1-201ENST00000413731 ZFYVE9O95405 1425 aa12.88□□□□□ -0.35
UPF3AP1-201ENST00000413731 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
UPF3AP1-201ENST00000413731 POTEAQ6S8J7 498 aa12.88□□□□□ -0.35
UPF3AP1-201ENST00000413731 CHIC2Q9UKJ5 165 aa12.88□□□□□ -0.35
UPF3AP1-201ENST00000413731 UNC13BO14795 1591 aa12.87□□□□□ -0.35
UPF3AP1-201ENST00000413731 RPRD2Q5VT52 1461 aaKnown RBP12.87□□□□□ -0.35
UPF3AP1-201ENST00000413731 E9PCH4 1651 aa12.86□□□□□ -0.35
UPF3AP1-201ENST00000413731 MSH6P52701 1360 aa12.86□□□□□ -0.35
UPF3AP1-201ENST00000413731 VASPP50552 380 aaPredicted RBP12.86□□□□□ -0.35
UPF3AP1-201ENST00000413731 PROSER2Q86WR7 435 aaPredicted RBP12.86□□□□□ -0.35
UPF3AP1-201ENST00000413731 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
UPF3AP1-201ENST00000413731 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.85□□□□□ -0.35
UPF3AP1-201ENST00000413731 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
UPF3AP1-201ENST00000413731 LRP6O75581 1613 aa12.84□□□□□ -0.35
UPF3AP1-201ENST00000413731 SHPRHQ149N8 1683 aa12.83□□□□□ -0.35
UPF3AP1-201ENST00000413731 DIP2AQ14689 1571 aa12.83□□□□□ -0.36
UPF3AP1-201ENST00000413731 ANKRD50Q9ULJ7 1429 aa12.83□□□□□ -0.36
UPF3AP1-201ENST00000413731 AHDC1Q5TGY3 1603 aaPredicted RBP12.82□□□□□ -0.36
UPF3AP1-201ENST00000413731 JCADQ9P266 1359 aa12.81□□□□□ -0.36
UPF3AP1-201ENST00000413731 IQGAP3Q86VI3 1631 aa12.81□□□□□ -0.36
UPF3AP1-201ENST00000413731 BCANQ96GW7 911 aa12.81□□□□□ -0.36
UPF3AP1-201ENST00000413731 SLC52A1Q9NWF4 448 aa12.81□□□□□ -0.36
UPF3AP1-201ENST00000413731 ADAMTS13Q76LX8 1427 aa12.8□□□□□ -0.36
UPF3AP1-201ENST00000413731 PPP1R15AO75807 674 aaPredicted RBP12.79□□□□□ -0.36
UPF3AP1-201ENST00000413731 SLAIN2Q9P270 581 aa12.79□□□□□ -0.36
UPF3AP1-201ENST00000413731 NRXN3Q9Y4C0 1643 aa12.79□□□□□ -0.36
UPF3AP1-201ENST00000413731 XRN1Q8IZH2 1706 aaKnown RBP12.79□□□□□ -0.36
UPF3AP1-201ENST00000413731 TRPM2O94759 1503 aa12.78□□□□□ -0.36
UPF3AP1-201ENST00000413731 MKRN4PQ13434 485 aaPredicted RBP12.77□□□□□ -0.37
UPF3AP1-201ENST00000413731 FAM50AQ14320 339 aaKnown RBP12.77□□□□□ -0.37
UPF3AP1-201ENST00000413731 SPHKAPQ2M3C7 1700 aa12.76□□□□□ -0.37
UPF3AP1-201ENST00000413731 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
UPF3AP1-201ENST00000413731 NHSL1Q5SYE7 1610 aa12.76□□□□□ -0.37
UPF3AP1-201ENST00000413731 NUTM2DQ5VT03 806 aaPredicted RBP12.75□□□□□ -0.37
UPF3AP1-201ENST00000413731 PTPRUQ92729 1446 aa12.74□□□□□ -0.37
UPF3AP1-201ENST00000413731 PROM2Q8N271 834 aa12.74□□□□□ -0.37
UPF3AP1-201ENST00000413731 ASXL1Q8IXJ9 1541 aa12.73□□□□□ -0.37
UPF3AP1-201ENST00000413731 SPATA31A6Q5VVP1 1343 aa12.73□□□□□ -0.37
UPF3AP1-201ENST00000413731 CHGAP10645 457 aaKnown RBP12.73□□□□□ -0.37
UPF3AP1-201ENST00000413731 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
UPF3AP1-201ENST00000413731 IFNLR1Q8IU57 520 aaPredicted RBP12.73□□□□□ -0.37
UPF3AP1-201ENST00000413731 TBX22Q9Y458 520 aa12.73□□□□□ -0.37
UPF3AP1-201ENST00000413731 NALCNQ8IZF0 1738 aa12.73□□□□□ -0.37
UPF3AP1-201ENST00000413731 SETBP1Q9Y6X0 1596 aa12.73□□□□□ -0.37
UPF3AP1-201ENST00000413731 PIK3R4Q99570 1358 aa12.72□□□□□ -0.37
UPF3AP1-201ENST00000413731 MEX3CQ5U5Q3 659 aaKnown RBP12.71□□□□□ -0.37
UPF3AP1-201ENST00000413731 DCCP43146 1447 aa12.71□□□□□ -0.38
UPF3AP1-201ENST00000413731 HDGFP51858 240 aaKnown RBP12.7□□□□□ -0.38
UPF3AP1-201ENST00000413731 CADPS2Q86UW7 1296 aa12.7□□□□□ -0.38
UPF3AP1-201ENST00000413731 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.7□□□□□ -0.38
UPF3AP1-201ENST00000413731 TRIM52Q96A61 297 aa12.7□□□□□ -0.38
UPF3AP1-201ENST00000413731 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
UPF3AP1-201ENST00000413731 ATF3P18847 181 aa12.69□□□□□ -0.38
UPF3AP1-201ENST00000413731 MST1RQ04912 1400 aa12.69□□□□□ -0.38
UPF3AP1-201ENST00000413731 BRINP3Q76B58 766 aa12.68□□□□□ -0.38
UPF3AP1-201ENST00000413731 C19orf44Q9H6X5 657 aa12.68□□□□□ -0.38
UPF3AP1-201ENST00000413731 CLTCL1P53675 1640 aa12.68□□□□□ -0.38
UPF3AP1-201ENST00000413731 ZNF772Q68DY9 489 aaPredicted RBP12.67□□□□□ -0.38
UPF3AP1-201ENST00000413731 UPF1Q92900 1129 aaKnown RBP eCLIP12.67□□□□□ -0.38
UPF3AP1-201ENST00000413731 NEXMIFQ5QGS0 1516 aa12.67□□□□□ -0.38
UPF3AP1-201ENST00000413731 CDK12Q9NYV4 1490 aaPredicted RBP12.66□□□□□ -0.38
UPF3AP1-201ENST00000413731 SETD5Q9C0A6 1442 aa12.66□□□□□ -0.38
UPF3AP1-201ENST00000413731 AMOTL2Q9Y2J4 779 aa12.66□□□□□ -0.38
UPF3AP1-201ENST00000413731 KIF1BO60333 1816 aa12.66□□□□□ -0.38
UPF3AP1-201ENST00000413731 NUP155O75694 1391 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms