RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 IDI1Q13907 227 aa16.86■□□□□ 0.29
HDAC9-206ENST00000413380 CEP170BQ9Y4F5 1589 aaPredicted RBP16.85■□□□□ 0.29
HDAC9-206ENST00000413380 PPLO60437 1756 aa16.85■□□□□ 0.29
HDAC9-206ENST00000413380 A2ML1A8K2U0 1454 aa16.85■□□□□ 0.29
HDAC9-206ENST00000413380 NEXMIFQ5QGS0 1516 aa16.82■□□□□ 0.28
HDAC9-206ENST00000413380 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
HDAC9-206ENST00000413380 NEUROD1Q13562 356 aa16.8■□□□□ 0.28
HDAC9-206ENST00000413380 SLIT1O75093 1534 aa16.8■□□□□ 0.28
HDAC9-206ENST00000413380 MYOM2P54296 1465 aa16.8■□□□□ 0.28
HDAC9-206ENST00000413380 DCAF8L1A6NGE4 600 aa16.79■□□□□ 0.28
HDAC9-206ENST00000413380 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
HDAC9-206ENST00000413380 STAC3Q96MF2 364 aa16.79■□□□□ 0.28
HDAC9-206ENST00000413380 ARHGAP23Q9P227 1491 aa16.79■□□□□ 0.28
HDAC9-206ENST00000413380 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
HDAC9-206ENST00000413380 RPGRIP1LQ68CZ1 1315 aa16.78■□□□□ 0.28
HDAC9-206ENST00000413380 NRXN1Q9ULB1 1477 aa16.78■□□□□ 0.28
HDAC9-206ENST00000413380 ZFYVE9O95405 1425 aa16.78■□□□□ 0.28
HDAC9-206ENST00000413380 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
HDAC9-206ENST00000413380 KIAA1210Q9ULL0 1709 aa16.75■□□□□ 0.27
HDAC9-206ENST00000413380 TMEM2Q9UHN6 1383 aa16.74■□□□□ 0.27
HDAC9-206ENST00000413380 PRAG1Q86YV5 1406 aa16.72■□□□□ 0.27
HDAC9-206ENST00000413380 PPP1R15AO75807 674 aaPredicted RBP16.72■□□□□ 0.27
HDAC9-206ENST00000413380 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
HDAC9-206ENST00000413380 RIMS2Q9UQ26 1411 aa16.71■□□□□ 0.27
HDAC9-206ENST00000413380 TRPM1Q7Z4N2 1603 aa16.71■□□□□ 0.27
HDAC9-206ENST00000413380 POLR1AO95602 1720 aaPredicted RBP16.71■□□□□ 0.27
HDAC9-206ENST00000413380 RGL3Q3MIN7 710 aa16.71■□□□□ 0.27
HDAC9-206ENST00000413380 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
HDAC9-206ENST00000413380 LAMC1P11047 1609 aa16.7■□□□□ 0.26
HDAC9-206ENST00000413380 CHGAP10645 457 aaKnown RBP16.7■□□□□ 0.26
HDAC9-206ENST00000413380 STAG3Q9UJ98 1225 aa16.7■□□□□ 0.26
HDAC9-206ENST00000413380 PIK3C2GO75747 1445 aa16.7■□□□□ 0.26
HDAC9-206ENST00000413380 SETBP1Q9Y6X0 1596 aa16.69■□□□□ 0.26
HDAC9-206ENST00000413380 SETD1AO15047 1707 aaKnown RBP16.69■□□□□ 0.26
HDAC9-206ENST00000413380 NRXN3Q9Y4C0 1643 aa16.69■□□□□ 0.26
HDAC9-206ENST00000413380 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
HDAC9-206ENST00000413380 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.68■□□□□ 0.26
HDAC9-206ENST00000413380 DCAF11Q8TEB1 546 aa16.68■□□□□ 0.26
HDAC9-206ENST00000413380 RALGAPBQ86X10 1494 aa16.67■□□□□ 0.26
HDAC9-206ENST00000413380 SCAF11Q99590 1463 aaKnown RBP16.67■□□□□ 0.26
HDAC9-206ENST00000413380 VGFO15240 615 aaPredicted RBP16.66■□□□□ 0.26
HDAC9-206ENST00000413380 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
HDAC9-206ENST00000413380 MED14O60244 1454 aa16.65■□□□□ 0.26
HDAC9-206ENST00000413380 IQGAP1P46940 1657 aa16.65■□□□□ 0.26
HDAC9-206ENST00000413380 PLEKHG1Q9ULL1 1385 aa16.64■□□□□ 0.26
HDAC9-206ENST00000413380 ADGRF5Q8IZF2 1346 aa16.64■□□□□ 0.25
HDAC9-206ENST00000413380 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
HDAC9-206ENST00000413380 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
HDAC9-206ENST00000413380 GPRASP1Q5JY77 1395 aa16.63■□□□□ 0.25
HDAC9-206ENST00000413380 LTKP29376 864 aa16.62■□□□□ 0.25
HDAC9-206ENST00000413380 ALKQ9UM73 1620 aa16.62■□□□□ 0.25
HDAC9-206ENST00000413380 STRCQ7RTU9 1775 aa16.61■□□□□ 0.25
HDAC9-206ENST00000413380 ADGRB1O14514 1584 aa16.6■□□□□ 0.25
HDAC9-206ENST00000413380 KDM2AQ9Y2K7 1162 aa16.6■□□□□ 0.25
HDAC9-206ENST00000413380 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
HDAC9-206ENST00000413380 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
HDAC9-206ENST00000413380 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
HDAC9-206ENST00000413380 ADAMTS13Q76LX8 1427 aa16.59■□□□□ 0.25
HDAC9-206ENST00000413380 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.24
HDAC9-206ENST00000413380 C14orf93Q9H972 538 aaKnown RBP16.58■□□□□ 0.24
HDAC9-206ENST00000413380 KNDC1Q76NI1 1749 aa16.56■□□□□ 0.24
HDAC9-206ENST00000413380 NUTM2DQ5VT03 806 aaPredicted RBP16.55■□□□□ 0.24
HDAC9-206ENST00000413380 NPHP4O75161 1426 aaPredicted RBP16.54■□□□□ 0.24
HDAC9-206ENST00000413380 ROCK2O75116 1388 aaKnown RBP16.53■□□□□ 0.24
HDAC9-206ENST00000413380 CHD2O14647 1828 aaKnown RBP16.53■□□□□ 0.24
HDAC9-206ENST00000413380 PIK3R4Q99570 1358 aa16.52■□□□□ 0.24
HDAC9-206ENST00000413380 CFAP70Q5T0N1 1121 aa16.52■□□□□ 0.24
HDAC9-206ENST00000413380 TBX22Q9Y458 520 aa16.52■□□□□ 0.24
HDAC9-206ENST00000413380 XRN1Q8IZH2 1706 aaKnown RBP16.52■□□□□ 0.24
HDAC9-206ENST00000413380 ARHGEF28Q8N1W1 1705 aaKnown RBP16.51■□□□□ 0.23
HDAC9-206ENST00000413380 HSPA2P54652 639 aa16.51■□□□□ 0.23
HDAC9-206ENST00000413380 DLC1Q96QB1 1528 aa16.5■□□□□ 0.23
HDAC9-206ENST00000413380 NBPF1Q3BBV0 1214 aa16.5■□□□□ 0.23
HDAC9-206ENST00000413380 TECPR2O15040 1411 aa16.5■□□□□ 0.23
HDAC9-206ENST00000413380 NWD1Q149M9 1564 aa16.5■□□□□ 0.23
HDAC9-206ENST00000413380 CPS1P31327 1500 aa16.49■□□□□ 0.23
HDAC9-206ENST00000413380 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
HDAC9-206ENST00000413380 YTHDC2Q9H6S0 1430 aaKnown RBP16.48■□□□□ 0.23
HDAC9-206ENST00000413380 METP08581 1390 aa16.48■□□□□ 0.23
HDAC9-206ENST00000413380 LRPPRCP42704 1394 aaKnown RBP16.48■□□□□ 0.23
HDAC9-206ENST00000413380 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
HDAC9-206ENST00000413380 ABCC11Q96J66 1382 aa16.46■□□□□ 0.23
HDAC9-206ENST00000413380 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
HDAC9-206ENST00000413380 USP47Q96K76 1375 aa16.45■□□□□ 0.22
HDAC9-206ENST00000413380 PTCH1Q13635 1447 aa16.45■□□□□ 0.22
HDAC9-206ENST00000413380 SLC26A8Q96RN1 970 aa16.43■□□□□ 0.22
HDAC9-206ENST00000413380 FAM135BQ49AJ0 1406 aa16.43■□□□□ 0.22
HDAC9-206ENST00000413380 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
HDAC9-206ENST00000413380 SBNO2Q9Y2G9 1366 aa16.42■□□□□ 0.22
HDAC9-206ENST00000413380 STRCP1A6NGW2 1772 aa16.42■□□□□ 0.22
HDAC9-206ENST00000413380 TMEM132EQ6IEE7 984 aa16.42■□□□□ 0.22
HDAC9-206ENST00000413380 SIRT1Q96EB6 747 aa16.42■□□□□ 0.22
HDAC9-206ENST00000413380 QRICH2Q9H0J4 1663 aa16.42■□□□□ 0.22
HDAC9-206ENST00000413380 EIF4G2P78344 907 aaKnown RBP eCLIP16.41■□□□□ 0.22
HDAC9-206ENST00000413380 NKTRP30414 1462 aaKnown RBP16.41■□□□□ 0.22
HDAC9-206ENST00000413380 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
HDAC9-206ENST00000413380 BCANQ96GW7 911 aa16.4■□□□□ 0.22
HDAC9-206ENST00000413380 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
HDAC9-206ENST00000413380 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
HDAC9-206ENST00000413380 KCNA6P17658 529 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms