RNA–Protein interactions for RNA: ENST00000412135.6

FGFR3-204, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 5 BASIC

Gene FGFR3, Length 3,951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-204ENST00000412135 EFCAB5A4FU69 1503 aa20.72■□□□□ 0.91
FGFR3-204ENST00000412135 GGT6Q6P531 493 aa20.71■□□□□ 0.91
FGFR3-204ENST00000412135 XRCC6P12956 609 aaKnown RBP eCLIP20.7■□□□□ 0.97e-8■□□□□ 10.6
FGFR3-204ENST00000412135 BCL11BQ9C0K0 894 aaPredicted RBP20.7■□□□□ 0.9
FGFR3-204ENST00000412135 STAG3Q9UJ98 1225 aa20.7■□□□□ 0.9
FGFR3-204ENST00000412135 SLC12A5Q9H2X9 1139 aa20.69■□□□□ 0.9
FGFR3-204ENST00000412135 MTHFSP49914 203 aa20.69■□□□□ 0.9
FGFR3-204ENST00000412135 ZKSCAN2Q63HK3 967 aa20.68■□□□□ 0.9
FGFR3-204ENST00000412135 PCDHB15Q9Y5E8 787 aa20.68■□□□□ 0.9
FGFR3-204ENST00000412135 DZIP1LQ8IYY4 767 aaKnown RBP20.68■□□□□ 0.9
FGFR3-204ENST00000412135 PER1O15534 1290 aaPredicted RBP20.66■□□□□ 0.9
FGFR3-204ENST00000412135 RNF214Q8ND24 703 aa20.66■□□□□ 0.9
FGFR3-204ENST00000412135 THOC2Q8NI27 1593 aaKnown RBP20.65■□□□□ 0.9
FGFR3-204ENST00000412135 RLBP1P12271 317 aa20.64■□□□□ 0.89
FGFR3-204ENST00000412135 EXOSC9Q06265 439 aaKnown RBP20.64■□□□□ 0.89
FGFR3-204ENST00000412135 WWC1Q8IX03 1113 aa20.64■□□□□ 0.89
FGFR3-204ENST00000412135 R3HCC1Q9Y3T6 440 aaKnown RBP20.63■□□□□ 0.89
FGFR3-204ENST00000412135 GRPEL1Q9HAV7 217 aa20.63■□□□□ 0.89
FGFR3-204ENST00000412135 SPATA31E1Q6ZUB1 1445 aa20.63■□□□□ 0.89
FGFR3-204ENST00000412135 SNAPC4Q5SXM2 1469 aa20.63■□□□□ 0.89
FGFR3-204ENST00000412135 CALD1Q05682 793 aaKnown RBP20.62■□□□□ 0.89
FGFR3-204ENST00000412135 MCTP1Q6DN14 999 aa20.62■□□□□ 0.89
FGFR3-204ENST00000412135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.62■□□□□ 0.89
FGFR3-204ENST00000412135 GGNBP2Q9H3C7 697 aa20.61■□□□□ 0.89
FGFR3-204ENST00000412135 ERBINQ96RT1 1412 aa20.61■□□□□ 0.89
FGFR3-204ENST00000412135 ESPNB1AK53 854 aa20.61■□□□□ 0.89
FGFR3-204ENST00000412135 ZMYND15Q9H091 742 aa20.61■□□□□ 0.89
FGFR3-204ENST00000412135 DDX11L8A8MPP1 907 aa20.61■□□□□ 0.89
FGFR3-204ENST00000412135 TAOK2Q9UL54 1235 aa20.61■□□□□ 0.89
FGFR3-204ENST00000412135 LRPPRCP42704 1394 aaKnown RBP20.6■□□□□ 0.89
FGFR3-204ENST00000412135 MRE11P49959 708 aa20.6■□□□□ 0.89
FGFR3-204ENST00000412135 TEX14Q8IWB6 1497 aa20.59■□□□□ 0.89
FGFR3-204ENST00000412135 C9orf84Q5VXU9 1444 aa20.59■□□□□ 0.89
FGFR3-204ENST00000412135 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
FGFR3-204ENST00000412135 AFAP1Q8N556 730 aa20.58■□□□□ 0.89
FGFR3-204ENST00000412135 CAVIN1Q6NZI2 390 aaKnown RBP20.58■□□□□ 0.89
FGFR3-204ENST00000412135 GRIN2BQ13224 1484 aa20.58■□□□□ 0.88
FGFR3-204ENST00000412135 CFAP43Q8NDM7 1665 aa20.58■□□□□ 0.88
FGFR3-204ENST00000412135 RUNDC1Q96C34 613 aa20.57■□□□□ 0.88
FGFR3-204ENST00000412135 PDE3AQ14432 1141 aa20.57■□□□□ 0.88
FGFR3-204ENST00000412135 MAGI3Q5TCQ9 1506 aa20.57■□□□□ 0.88
FGFR3-204ENST00000412135 UGGT2Q9NYU1 1516 aa20.56■□□□□ 0.88
FGFR3-204ENST00000412135 HMOX1P09601 288 aa20.55■□□□□ 0.88
FGFR3-204ENST00000412135 NASPP49321 788 aaPredicted RBP20.55■□□□□ 0.88
FGFR3-204ENST00000412135 RARSP54136 660 aaKnown RBP20.55■□□□□ 0.88
FGFR3-204ENST00000412135 TESK2Q96S53 571 aa20.55■□□□□ 0.88
FGFR3-204ENST00000412135 ABCA10Q8WWZ4 1543 aa20.55■□□□□ 0.88
FGFR3-204ENST00000412135 NOB1Q9ULX3 412 aaKnown RBP20.55■□□□□ 0.88
FGFR3-204ENST00000412135 RIPK4P57078 832 aa20.55■□□□□ 0.88
FGFR3-204ENST00000412135 RBM42Q9BTD8 480 aaKnown RBP20.55■□□□□ 0.88
FGFR3-204ENST00000412135 PARD3Q8TEW0 1356 aa20.55■□□□□ 0.88
FGFR3-204ENST00000412135 DENND4BO75064 1496 aaPredicted RBP20.55■□□□□ 0.88
FGFR3-204ENST00000412135 PLB1Q6P1J6 1458 aa20.55■□□□□ 0.88
FGFR3-204ENST00000412135 KIAA1211Q6ZU35 1233 aa20.54■□□□□ 0.88
FGFR3-204ENST00000412135 CABP2Q9NPB3 220 aa20.54■□□□□ 0.88
FGFR3-204ENST00000412135 ROCK1Q13464 1354 aa20.54■□□□□ 0.88
FGFR3-204ENST00000412135 SLC4A10Q6U841 1118 aa20.53■□□□□ 0.88
FGFR3-204ENST00000412135 THUMPD2Q9BTF0 503 aaKnown RBP20.53■□□□□ 0.88
FGFR3-204ENST00000412135 A0A0U1RQG5 324 aaPredicted RBP20.52■□□□□ 0.88
FGFR3-204ENST00000412135 IPO8O15397 1037 aaKnown RBP20.52■□□□□ 0.88
FGFR3-204ENST00000412135 NUTM2FA1L443 756 aa20.52■□□□□ 0.87
FGFR3-204ENST00000412135 HMGXB3Q12766 1538 aa20.52■□□□□ 0.87
FGFR3-204ENST00000412135 CAMSAP2Q08AD1 1489 aa20.51■□□□□ 0.87
FGFR3-204ENST00000412135 TBC1D32Q96NH3 1257 aa20.51■□□□□ 0.87
FGFR3-204ENST00000412135 CARMIL2Q6F5E8 1435 aa20.51■□□□□ 0.87
FGFR3-204ENST00000412135 KDM5BQ9UGL1 1544 aa20.5■□□□□ 0.87
FGFR3-204ENST00000412135 FBLN1P23142 703 aa20.5■□□□□ 0.87
FGFR3-204ENST00000412135 SPAG9O60271 1321 aaKnown RBP20.49■□□□□ 0.87
FGFR3-204ENST00000412135 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.49■□□□□ 0.87
FGFR3-204ENST00000412135 TNPO1Q92973 898 aaKnown RBP20.49■□□□□ 0.87
FGFR3-204ENST00000412135 SSFA2P28290 1259 aa20.49■□□□□ 0.87
FGFR3-204ENST00000412135 PRDM10Q9NQV6 1147 aa20.49■□□□□ 0.87
FGFR3-204ENST00000412135 TMEM57Q8N5G2 664 aa20.48■□□□□ 0.87
FGFR3-204ENST00000412135 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
FGFR3-204ENST00000412135 MINK1Q8N4C8 1332 aaPredicted RBP20.48■□□□□ 0.87
FGFR3-204ENST00000412135 MVPQ14764 893 aaKnown RBP20.48■□□□□ 0.87
FGFR3-204ENST00000412135 PZPP20742 1482 aa20.48■□□□□ 0.87
FGFR3-204ENST00000412135 PRPF40AO75400 957 aaKnown RBP20.48■□□□□ 0.87
FGFR3-204ENST00000412135 DDX19BQ9UMR2 479 aa20.48■□□□□ 0.87
FGFR3-204ENST00000412135 TROQ12816 1431 aaPredicted RBP20.47■□□□□ 0.87
FGFR3-204ENST00000412135 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
FGFR3-204ENST00000412135 CHMP3Q9Y3E7 222 aa20.46■□□□□ 0.87
FGFR3-204ENST00000412135 SSH1Q8WYL5 1049 aa20.46■□□□□ 0.87
FGFR3-204ENST00000412135 CASC1Q6TDU7 716 aa20.45■□□□□ 0.86
FGFR3-204ENST00000412135 XPCQ01831 940 aaPredicted RBP20.45■□□□□ 0.86
FGFR3-204ENST00000412135 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
FGFR3-204ENST00000412135 NECTIN2Q92692 538 aa20.44■□□□□ 0.86
FGFR3-204ENST00000412135 NKTRP30414 1462 aaKnown RBP20.44■□□□□ 0.86
FGFR3-204ENST00000412135 TRIM6-TRIM34B2RNG4 842 aa20.44■□□□□ 0.86
FGFR3-204ENST00000412135 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
FGFR3-204ENST00000412135 ERCC6Q03468 1493 aa20.41■□□□□ 0.86
FGFR3-204ENST00000412135 EIF3AQ14152 1382 aaKnown RBP20.41■□□□□ 0.86
FGFR3-204ENST00000412135 TRIM27P14373 513 aa20.41■□□□□ 0.86
FGFR3-204ENST00000412135 RILPL2Q969X0 211 aa20.4■□□□□ 0.86
FGFR3-204ENST00000412135 ZNF428Q96B54 188 aa20.4■□□□□ 0.86
FGFR3-204ENST00000412135 URB2Q14146 1524 aaKnown RBP20.39■□□□□ 0.86
FGFR3-204ENST00000412135 RBM27Q9P2N5 1060 aaKnown RBP20.39■□□□□ 0.86
FGFR3-204ENST00000412135 ATF7IPQ6VMQ6 1270 aa20.38■□□□□ 0.85
FGFR3-204ENST00000412135 CHAMP1Q96JM3 812 aa20.38■□□□□ 0.85
FGFR3-204ENST00000412135 BCORL1Q5H9F3 1711 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms