RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 SIGLEC1Q9BZZ2 1709 aa33.47■■■□□ 2.95
VRK2-202ENST00000412104 ZMYM4Q5VZL5 1548 aa33.46■■■□□ 2.95
VRK2-202ENST00000412104 FAM69CQ0P6D2 419 aa33.45■■■□□ 2.95
VRK2-202ENST00000412104 ADGRF5Q8IZF2 1346 aa33.45■■■□□ 2.94
VRK2-202ENST00000412104 ZBED9Q6R2W3 1325 aa33.44■■■□□ 2.94
VRK2-202ENST00000412104 MYBBP1AQ9BQG0 1328 aaKnown RBP33.44■■■□□ 2.94
VRK2-202ENST00000412104 PER1O15534 1290 aaPredicted RBP33.43■■■□□ 2.94
VRK2-202ENST00000412104 FKBP8Q14318 412 aa33.43■■■□□ 2.94
VRK2-202ENST00000412104 PPLO60437 1756 aa33.43■■■□□ 2.94
VRK2-202ENST00000412104 EIF3AQ14152 1382 aaKnown RBP33.42■■■□□ 2.94
VRK2-202ENST00000412104 NOS1P29475 1434 aa33.41■■■□□ 2.94
VRK2-202ENST00000412104 TSPOAP1O95153 1857 aa33.41■■■□□ 2.94
VRK2-202ENST00000412104 PARD3Q8TEW0 1356 aa33.4■■■□□ 2.94
VRK2-202ENST00000412104 NEFLP07196 543 aa33.4■■■□□ 2.94
VRK2-202ENST00000412104 BRD4O60885 1362 aaPredicted RBP33.39■■■□□ 2.94
VRK2-202ENST00000412104 PIK3C2BO00750 1634 aa33.39■■■□□ 2.94
VRK2-202ENST00000412104 CFAP70Q5T0N1 1121 aa33.39■■■□□ 2.94
VRK2-202ENST00000412104 SYNMO15061 1565 aa33.38■■■□□ 2.93
VRK2-202ENST00000412104 CHGAP10645 457 aaKnown RBP33.37■■■□□ 2.93
VRK2-202ENST00000412104 TMC1Q8TDI8 760 aa33.37■■■□□ 2.93
VRK2-202ENST00000412104 ARHGAP31Q2M1Z3 1444 aa33.36■■■□□ 2.93
VRK2-202ENST00000412104 PANK3Q9H999 370 aa33.36■■■□□ 2.93
VRK2-202ENST00000412104 PNISRQ8TF01 805 aaKnown RBP33.35■■■□□ 2.93
VRK2-202ENST00000412104 SETBP1Q9Y6X0 1596 aa33.32■■■□□ 2.93
VRK2-202ENST00000412104 PIK3C2GO75747 1445 aa33.31■■■□□ 2.92
VRK2-202ENST00000412104 CDCA8Q53HL2 280 aa33.3■■■□□ 2.92
VRK2-202ENST00000412104 MYO3AQ8NEV4 1616 aa33.29■■■□□ 2.92
VRK2-202ENST00000412104 MYOM1P52179 1685 aa33.29■■■□□ 2.92
VRK2-202ENST00000412104 KDM5AP29375 1690 aaKnown RBP33.29■■■□□ 2.92
VRK2-202ENST00000412104 RPGRIP1LQ68CZ1 1315 aa33.28■■■□□ 2.92
VRK2-202ENST00000412104 LRPPRCP42704 1394 aaKnown RBP33.28■■■□□ 2.92
VRK2-202ENST00000412104 NLRP13Q86W25 1043 aa33.27■■■□□ 2.92
VRK2-202ENST00000412104 BCANQ96GW7 911 aa33.26■■■□□ 2.91
VRK2-202ENST00000412104 REREQ9P2R6 1566 aa33.24■■■□□ 2.91
VRK2-202ENST00000412104 PREX1Q8TCU6 1659 aa33.23■■■□□ 2.91
VRK2-202ENST00000412104 CC2D1BQ5T0F9 858 aaKnown RBP33.23■■■□□ 2.91
VRK2-202ENST00000412104 NEXMIFQ5QGS0 1516 aa33.21■■■□□ 2.91
VRK2-202ENST00000412104 ERVK-7P63135 1459 aa33.21■■■□□ 2.91
VRK2-202ENST00000412104 ADGRB1O14514 1584 aa33.21■■■□□ 2.91
VRK2-202ENST00000412104 KIF13AQ9H1H9 1805 aa33.19■■■□□ 2.9
VRK2-202ENST00000412104 C14orf93Q9H972 538 aaKnown RBP33.19■■■□□ 2.9
VRK2-202ENST00000412104 SLC24A1O60721 1099 aa33.18■■■□□ 2.9
VRK2-202ENST00000412104 PELP1Q8IZL8 1130 aaKnown RBP33.17■■■□□ 2.9
VRK2-202ENST00000412104 SBNO2Q9Y2G9 1366 aa33.17■■■□□ 2.9
VRK2-202ENST00000412104 AGLP35573 1532 aa33.16■■■□□ 2.9
VRK2-202ENST00000412104 IDI1Q13907 227 aa33.13■■■□□ 2.89
VRK2-202ENST00000412104 SLC52A1Q9NWF4 448 aa33.12■■■□□ 2.89
VRK2-202ENST00000412104 KNSTRNQ9Y448 316 aa33.12■■■□□ 2.89
VRK2-202ENST00000412104 MYO5BQ9ULV0 1848 aa33.12■■■□□ 2.89
VRK2-202ENST00000412104 SMG6Q86US8 1419 aaKnown RBP33.11■■■□□ 2.89
VRK2-202ENST00000412104 QRICH2Q9H0J4 1663 aa33.11■■■□□ 2.89
VRK2-202ENST00000412104 ASXL1Q8IXJ9 1541 aa33.1■■■□□ 2.89
VRK2-202ENST00000412104 CENPJQ9HC77 1338 aaPredicted RBP33.1■■■□□ 2.89
VRK2-202ENST00000412104 TMEM131LA2VDJ0 1609 aa33.09■■■□□ 2.89
VRK2-202ENST00000412104 VGFO15240 615 aaPredicted RBP33.08■■■□□ 2.89
VRK2-202ENST00000412104 AMER1Q5JTC6 1135 aaPredicted RBP33.08■■■□□ 2.89
VRK2-202ENST00000412104 TRAK1Q9UPV9 953 aa33.06■■■□□ 2.88
VRK2-202ENST00000412104 ARHGEF40Q8TER5 1519 aa33.05■■■□□ 2.88
VRK2-202ENST00000412104 ZFYVE9O95405 1425 aa33.04■■■□□ 2.88
VRK2-202ENST00000412104 NUTM2DQ5VT03 806 aaPredicted RBP33.04■■■□□ 2.88
VRK2-202ENST00000412104 CLTCQ00610 1675 aaKnown RBP33.04■■■□□ 2.88
VRK2-202ENST00000412104 TMEM132EQ6IEE7 984 aa33.04■■■□□ 2.88
VRK2-202ENST00000412104 NPC1L1Q9UHC9 1359 aa33.02■■■□□ 2.88
VRK2-202ENST00000412104 NUDCQ9Y266 331 aa33.02■■■□□ 2.88
VRK2-202ENST00000412104 ARHGEF28Q8N1W1 1705 aaKnown RBP33.02■■■□□ 2.88
VRK2-202ENST00000412104 IRX6P78412 446 aaPredicted RBP33.01■■■□□ 2.88
VRK2-202ENST00000412104 PPP6R1Q9UPN7 881 aa33.01■■■□□ 2.88
VRK2-202ENST00000412104 SENP3-EIF4A1A0A087X0R7 540 aa33■■■□□ 2.87
VRK2-202ENST00000412104 FBXO31Q5XUX0 539 aaPredicted RBP32.99■■■□□ 2.87
VRK2-202ENST00000412104 INSRP06213 1382 aa32.99■■■□□ 2.87
VRK2-202ENST00000412104 PPP2R1AP30153 589 aa32.96■■■□□ 2.87
VRK2-202ENST00000412104 BLMP54132 1417 aaPredicted RBP32.96■■■□□ 2.87
VRK2-202ENST00000412104 ERICH6BQ5W0A0 696 aa32.93■■■□□ 2.86
VRK2-202ENST00000412104 SPATA31D1Q6ZQQ2 1576 aa32.92■■■□□ 2.86
VRK2-202ENST00000412104 CARD14Q9BXL6 1004 aa32.89■■■□□ 2.85
VRK2-202ENST00000412104 TULP4Q9NRJ4 1543 aa32.85■■■□□ 2.85
VRK2-202ENST00000412104 MLECQ14165 292 aa32.85■■■□□ 2.85
VRK2-202ENST00000412104 RNF123Q5XPI4 1314 aa32.8■■■□□ 2.84
VRK2-202ENST00000412104 STAG3Q9UJ98 1225 aa32.8■■■□□ 2.84
VRK2-202ENST00000412104 EVC2Q86UK5 1308 aa32.79■■■□□ 2.84
VRK2-202ENST00000412104 A2ML1A8K2U0 1454 aa32.79■■■□□ 2.84
VRK2-202ENST00000412104 SALL2Q9Y467 1007 aaPredicted RBP32.79■■■□□ 2.84
VRK2-202ENST00000412104 NSD3Q9BZ95 1437 aa32.78■■■□□ 2.84
VRK2-202ENST00000412104 ALKQ9UM73 1620 aa32.78■■■□□ 2.84
VRK2-202ENST00000412104 PDE3BQ13370 1112 aa32.78■■■□□ 2.84
VRK2-202ENST00000412104 PUS7Q96PZ0 661 aaKnown RBP32.77■■■□□ 2.84
VRK2-202ENST00000412104 ADAMTS8Q9UP79 889 aa32.77■■■□□ 2.84
VRK2-202ENST00000412104 USP32Q8NFA0 1604 aa32.77■■■□□ 2.84
VRK2-202ENST00000412104 SLC12A5Q9H2X9 1139 aa32.77■■■□□ 2.84
VRK2-202ENST00000412104 SENP3Q9H4L4 574 aaPredicted RBP32.77■■■□□ 2.84
VRK2-202ENST00000412104 TSHZ2Q9NRE2 1034 aa32.77■■■□□ 2.84
VRK2-202ENST00000412104 PPP4R2Q9NY27 417 aa32.77■■■□□ 2.84
VRK2-202ENST00000412104 PTPRMP28827 1452 aa32.76■■■□□ 2.83
VRK2-202ENST00000412104 WDR43Q15061 677 aaKnown RBP eCLIP32.75■■■□□ 2.83
VRK2-202ENST00000412104 YTHDC2Q9H6S0 1430 aaKnown RBP32.74■■■□□ 2.83
VRK2-202ENST00000412104 STK26Q9P289 416 aa32.73■■■□□ 2.83
VRK2-202ENST00000412104 SAFB2Q14151 953 aaKnown RBP eCLIP32.69■■■□□ 2.82
VRK2-202ENST00000412104 RIMS2Q9UQ26 1411 aa32.69■■■□□ 2.82
VRK2-202ENST00000412104 ZMYM3Q14202 1370 aa32.69■■■□□ 2.82
VRK2-202ENST00000412104 ESF1Q9H501 851 aaKnown RBP32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms