RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 SYTL4Q96C24 671 aaPredicted RBP22.53■■□□□ 1.2
HCG11-201ENST00000411553 TRIM29Q14134 588 aa22.52■■□□□ 1.2
HCG11-201ENST00000411553 IFIT2P09913 472 aaKnown RBP22.52■■□□□ 1.2
HCG11-201ENST00000411553 BECN2A8MW95 431 aa22.52■■□□□ 1.2
HCG11-201ENST00000411553 TPM1P09493 284 aa22.51■■□□□ 1.19
HCG11-201ENST00000411553 ZKSCAN1P17029 563 aaPredicted RBP22.51■■□□□ 1.19
HCG11-201ENST00000411553 VPS37DQ86XT2 251 aa22.51■■□□□ 1.19
HCG11-201ENST00000411553 PLIN1O60240 522 aa22.51■■□□□ 1.19
HCG11-201ENST00000411553 MEX3CQ5U5Q3 659 aaKnown RBP22.51■■□□□ 1.19
HCG11-201ENST00000411553 COG6Q9Y2V7 657 aa22.5■■□□□ 1.19
HCG11-201ENST00000411553 APPP05067 770 aa22.5■■□□□ 1.19
HCG11-201ENST00000411553 USP47Q96K76 1375 aa22.5■■□□□ 1.19
HCG11-201ENST00000411553 DDX49Q9Y6V7 483 aaKnown RBP22.5■■□□□ 1.19
HCG11-201ENST00000411553 API5Q9BZZ5 524 aaKnown RBP22.49■■□□□ 1.19
HCG11-201ENST00000411553 DDX19BQ9UMR2 479 aa22.49■■□□□ 1.19
HCG11-201ENST00000411553 REC8O95072 547 aa22.49■■□□□ 1.19
HCG11-201ENST00000411553 NECTIN2Q92692 538 aa22.48■■□□□ 1.19
HCG11-201ENST00000411553 APAF1O14727 1248 aa22.48■■□□□ 1.19
HCG11-201ENST00000411553 TNNT3P45378 269 aaPredicted RBP22.48■■□□□ 1.19
HCG11-201ENST00000411553 FOXD4L6Q3SYB3 417 aaPredicted RBP22.48■■□□□ 1.19
HCG11-201ENST00000411553 FOXD4L3Q6VB84 417 aaPredicted RBP22.48■■□□□ 1.19
HCG11-201ENST00000411553 RRP1P56182 461 aaKnown RBP22.48■■□□□ 1.19
HCG11-201ENST00000411553 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.47■■□□□ 1.19
HCG11-201ENST00000411553 RIPK4P57078 832 aa22.47■■□□□ 1.19
HCG11-201ENST00000411553 CRBNQ96SW2 442 aa22.47■■□□□ 1.19
HCG11-201ENST00000411553 CPLX1O14810 134 aa22.46■■□□□ 1.19
HCG11-201ENST00000411553 SKOR2Q2VWA4 1001 aaPredicted RBP22.46■■□□□ 1.19
HCG11-201ENST00000411553 PRKRIP1Q9H875 184 aaPredicted RBP22.46■■□□□ 1.19
HCG11-201ENST00000411553 ANO2Q9NQ90 1003 aa22.46■■□□□ 1.19
HCG11-201ENST00000411553 DHX16O60231 1041 aaKnown RBP22.46■■□□□ 1.19
HCG11-201ENST00000411553 G3BP1Q13283 466 aaKnown RBP eCLIP22.46■■□□□ 1.19
HCG11-201ENST00000411553 CCDC47Q96A33 483 aaKnown RBP22.46■■□□□ 1.19
HCG11-201ENST00000411553 TSHZ2Q9NRE2 1034 aa22.46■■□□□ 1.19
HCG11-201ENST00000411553 ROCK1Q13464 1354 aa22.45■■□□□ 1.19
HCG11-201ENST00000411553 TRDNQ13061 729 aa22.45■■□□□ 1.18
HCG11-201ENST00000411553 ANO8Q9HCE9 1232 aaPredicted RBP22.45■■□□□ 1.18
HCG11-201ENST00000411553 FBXW7Q969H0 707 aa22.45■■□□□ 1.18
HCG11-201ENST00000411553 FKBP5Q13451 457 aaPredicted RBP22.45■■□□□ 1.18
HCG11-201ENST00000411553 EXOC6Q8TAG9 804 aa22.44■■□□□ 1.18
HCG11-201ENST00000411553 PDE4AP27815 886 aa22.44■■□□□ 1.18
HCG11-201ENST00000411553 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
HCG11-201ENST00000411553 RNF20Q5VTR2 975 aa22.43■■□□□ 1.18
HCG11-201ENST00000411553 WWC1Q8IX03 1113 aa22.42■■□□□ 1.18
HCG11-201ENST00000411553 DZIP1LQ8IYY4 767 aaKnown RBP22.42■■□□□ 1.18
HCG11-201ENST00000411553 CCAR2Q8N163 923 aaKnown RBP22.41■■□□□ 1.18
HCG11-201ENST00000411553 WIZO95785 1651 aa22.41■■□□□ 1.18
HCG11-201ENST00000411553 PCMTD1Q96MG8 357 aaPredicted RBP22.41■■□□□ 1.18
HCG11-201ENST00000411553 RAPGEF4Q8WZA2 1011 aa22.4■■□□□ 1.18
HCG11-201ENST00000411553 ZBED9Q6R2W3 1325 aa22.4■■□□□ 1.18
HCG11-201ENST00000411553 CCDC70Q6NSX1 233 aa22.4■■□□□ 1.18
HCG11-201ENST00000411553 ERICH2A1L162 156 aa22.4■■□□□ 1.18
HCG11-201ENST00000411553 NFXL1Q6ZNB6 911 aa22.4■■□□□ 1.18
HCG11-201ENST00000411553 ANKRD20A12PQ8NF67 263 aa22.39■■□□□ 1.18
HCG11-201ENST00000411553 DHX57Q6P158 1386 aaKnown RBP22.39■■□□□ 1.17
HCG11-201ENST00000411553 TSPYL4Q9UJ04 414 aa22.39■■□□□ 1.17
HCG11-201ENST00000411553 ATF3P18847 181 aa22.38■■□□□ 1.17
HCG11-201ENST00000411553 HSP90AB4PQ58FF6 505 aa22.38■■□□□ 1.17
HCG11-201ENST00000411553 IPO7O95373 1038 aaKnown RBP22.38■■□□□ 1.17
HCG11-201ENST00000411553 RUNDC1Q96C34 613 aa22.37■■□□□ 1.17
HCG11-201ENST00000411553 HOOK1Q9UJC3 728 aaKnown RBP22.37■■□□□ 1.17
HCG11-201ENST00000411553 GNAI1P63096 354 aa22.37■■□□□ 1.17
HCG11-201ENST00000411553 RBM33Q96EV2 1170 aaKnown RBP22.37■■□□□ 1.17
HCG11-201ENST00000411553 FANCD2Q9BXW9 1451 aa22.36■■□□□ 1.17
HCG11-201ENST00000411553 SLC4A3P48751 1232 aa22.36■■□□□ 1.17
HCG11-201ENST00000411553 ERC2O15083 957 aa22.34■■□□□ 1.17
HCG11-201ENST00000411553 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
HCG11-201ENST00000411553 BICD2Q8TD16 824 aa22.34■■□□□ 1.17
HCG11-201ENST00000411553 CWC22Q9HCG8 908 aaKnown RBP22.34■■□□□ 1.17
HCG11-201ENST00000411553 RIC3Q7Z5B4 369 aa22.33■■□□□ 1.17
HCG11-201ENST00000411553 CCDC43Q96MW1 224 aaKnown RBP22.33■■□□□ 1.17
HCG11-201ENST00000411553 NLRP2Q9NX02 1062 aa22.32■■□□□ 1.16
HCG11-201ENST00000411553 INTS3Q68E01 1043 aaKnown RBP22.31■■□□□ 1.16
HCG11-201ENST00000411553 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
HCG11-201ENST00000411553 MYOM3Q5VTT5 1437 aa22.31■■□□□ 1.16
HCG11-201ENST00000411553 HMOX1P09601 288 aa22.31■■□□□ 1.16
HCG11-201ENST00000411553 MIA2Q96PC5 1412 aa22.31■■□□□ 1.16
HCG11-201ENST00000411553 GPS2Q13227 327 aa22.3■■□□□ 1.16
HCG11-201ENST00000411553 STAC3Q96MF2 364 aa22.3■■□□□ 1.16
HCG11-201ENST00000411553 SAFBQ15424 915 aaKnown RBP eCLIP22.3■■□□□ 1.16
HCG11-201ENST00000411553 KLHL34Q8N239 644 aa22.3■■□□□ 1.16
HCG11-201ENST00000411553 NEUROD6Q96NK8 337 aa22.3■■□□□ 1.16
HCG11-201ENST00000411553 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
HCG11-201ENST00000411553 SMC3Q9UQE7 1217 aa22.29■■□□□ 1.16
HCG11-201ENST00000411553 VPS37CA5D8V6 355 aaPredicted RBP22.29■■□□□ 1.16
HCG11-201ENST00000411553 AIMP1Q12904 312 aaKnown RBP22.29■■□□□ 1.16
HCG11-201ENST00000411553 RALYLQ86SE5 291 aaKnown RBP22.28■■□□□ 1.16
HCG11-201ENST00000411553 ZNF592Q92610 1267 aa22.27■■□□□ 1.16
HCG11-201ENST00000411553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.27■■□□□ 1.16
HCG11-201ENST00000411553 WASHC4Q2M389 1173 aa22.26■■□□□ 1.15
HCG11-201ENST00000411553 SAMD1Q6SPF0 538 aaPredicted RBP22.26■■□□□ 1.15
HCG11-201ENST00000411553 CNKSR2Q8WXI2 1034 aa22.26■■□□□ 1.15
HCG11-201ENST00000411553 GGNBP2Q9H3C7 697 aa22.25■■□□□ 1.15
HCG11-201ENST00000411553 CCDC27Q2M243 656 aa22.24■■□□□ 1.15
HCG11-201ENST00000411553 NUTM2GQ5VZR2 741 aa22.24■■□□□ 1.15
HCG11-201ENST00000411553 GSE1Q14687 1217 aa22.24■■□□□ 1.15
HCG11-201ENST00000411553 UBTFL1P0CB47 393 aaPredicted RBP22.24■■□□□ 1.15
HCG11-201ENST00000411553 CHMP5Q9NZZ3 219 aa22.24■■□□□ 1.15
HCG11-201ENST00000411553 NLRP6P59044 892 aa22.23■■□□□ 1.15
HCG11-201ENST00000411553 SETQ01105 290 aaPredicted RBP22.23■■□□□ 1.15
HCG11-201ENST00000411553 FYB1O15117 783 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms