RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 RCCD1A6NED2 376 aa8.98□□□□□ -0.97
LSM5-205ENST00000409952 ZMYND10O75800 440 aa8.98□□□□□ -0.97
LSM5-205ENST00000409952 DNAJB2P25686 324 aa8.98□□□□□ -0.97
LSM5-205ENST00000409952 RANGAP1P46060 587 aaPredicted RBP8.98□□□□□ -0.97
LSM5-205ENST00000409952 ZC3H15Q8WU90 426 aaKnown RBP8.98□□□□□ -0.97
LSM5-205ENST00000409952 LRCH3Q96II8 777 aa8.98□□□□□ -0.97
LSM5-205ENST00000409952 TMEM134Q9H6X4 195 aa8.98□□□□□ -0.97
LSM5-205ENST00000409952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.97□□□□□ -0.97
LSM5-205ENST00000409952 BARGINQ6ZT62 677 aa8.97□□□□□ -0.97
LSM5-205ENST00000409952 TSR3Q9UJK0 312 aaKnown RBP8.97□□□□□ -0.97
LSM5-205ENST00000409952 MINK1Q8N4C8 1332 aaPredicted RBP8.97□□□□□ -0.97
LSM5-205ENST00000409952 IRF6O14896 467 aa8.96□□□□□ -0.98
LSM5-205ENST00000409952 SWT1Q5T5J6 900 aaKnown RBP8.96□□□□□ -0.98
LSM5-205ENST00000409952 NYAP1Q6ZVC0 841 aa8.96□□□□□ -0.98
LSM5-205ENST00000409952 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
LSM5-205ENST00000409952 NEUROD2Q15784 382 aa8.94□□□□□ -0.98
LSM5-205ENST00000409952 WBP1LQ9NX94 342 aa8.94□□□□□ -0.98
LSM5-205ENST00000409952 HPS5Q9UPZ3 1129 aa8.93□□□□□ -0.98
LSM5-205ENST00000409952 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
LSM5-205ENST00000409952 HDGFP51858 240 aaKnown RBP8.91□□□□□ -0.98
LSM5-205ENST00000409952 CCDC102AQ96A19 550 aa8.9□□□□□ -0.98
LSM5-205ENST00000409952 PPP4CP60510 307 aa8.89□□□□□ -0.99
LSM5-205ENST00000409952 IFFO2Q5TF58 517 aa8.89□□□□□ -0.99
LSM5-205ENST00000409952 NECTIN2Q92692 538 aa8.89□□□□□ -0.99
LSM5-205ENST00000409952 ITGBL1O95965 494 aaPredicted RBP8.88□□□□□ -0.99
LSM5-205ENST00000409952 TMUB1Q9BVT8 246 aa8.88□□□□□ -0.99
LSM5-205ENST00000409952 SLC10A3P09131 477 aa8.87□□□□□ -0.99
LSM5-205ENST00000409952 IRX2Q9BZI1 471 aaPredicted RBP8.87□□□□□ -0.99
LSM5-205ENST00000409952 APLP1P51693 650 aa8.86□□□□□ -0.99
LSM5-205ENST00000409952 NLRP7Q8WX94 980 aa8.85□□□□□ -0.99
LSM5-205ENST00000409952 SLC4A3P48751 1232 aa8.84□□□□□ -0.99
LSM5-205ENST00000409952 SLC24A3Q9HC58 644 aa8.84□□□□□ -0.99
LSM5-205ENST00000409952 AMHR2Q16671 573 aa8.83□□□□□ -1
LSM5-205ENST00000409952 UBTFP17480 764 aaKnown RBP8.82□□□□□ -1
LSM5-205ENST00000409952 TJAP1Q5JTD0 557 aa8.82□□□□□ -1
LSM5-205ENST00000409952 ACTN4O43707 911 aaKnown RBP8.81□□□□□ -1
LSM5-205ENST00000409952 RNF40O75150 1001 aa8.81□□□□□ -1
LSM5-205ENST00000409952 RGS20O76081 388 aa8.81□□□□□ -1
LSM5-205ENST00000409952 KRI1Q8N9T8 703 aaKnown RBP8.81□□□□□ -1
LSM5-205ENST00000409952 PRR14Q9BWN1 585 aa8.81□□□□□ -1
LSM5-205ENST00000409952 SULF1Q8IWU6 871 aa8.8□□□□□ -1
LSM5-205ENST00000409952 AK7Q96M32 723 aa8.8□□□□□ -1
LSM5-205ENST00000409952 TRIM66O15016 1216 aa8.79□□□□□ -1
LSM5-205ENST00000409952 CD46P15529 392 aa8.79□□□□□ -1
LSM5-205ENST00000409952 CLCN1P35523 988 aa8.79□□□□□ -1
LSM5-205ENST00000409952 MDM2Q00987 491 aaPredicted RBP8.79□□□□□ -1
LSM5-205ENST00000409952 REPIN1Q9BWE0 567 aaKnown RBP8.79□□□□□ -1
LSM5-205ENST00000409952 GPCPD1Q9NPB8 672 aa8.79□□□□□ -1
LSM5-205ENST00000409952 CFHP08603 1231 aa8.78□□□□□ -1
LSM5-205ENST00000409952 GCGRP47871 477 aa8.78□□□□□ -1
LSM5-205ENST00000409952 RSPH4AQ5TD94 716 aa8.78□□□□□ -1
LSM5-205ENST00000409952 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
LSM5-205ENST00000409952 DDX11L8A8MPP1 907 aa8.77□□□□□ -1.01
LSM5-205ENST00000409952 KMT5BQ4FZB7 885 aa8.77□□□□□ -1.01
LSM5-205ENST00000409952 MTRQ99707 1265 aa8.77□□□□□ -1.01
LSM5-205ENST00000409952 A0A0G2JS52 829 aa8.76□□□□□ -1.01
LSM5-205ENST00000409952 KCNC4Q03721 635 aa8.76□□□□□ -1.01
LSM5-205ENST00000409952 TRIM26Q12899 539 aaPredicted RBP8.76□□□□□ -1.01
LSM5-205ENST00000409952 ZMYND15Q9H091 742 aa8.76□□□□□ -1.01
LSM5-205ENST00000409952 IL21Q9HBE4 155 aa8.76□□□□□ -1.01
LSM5-205ENST00000409952 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
LSM5-205ENST00000409952 PCDHB3Q9Y5E6 796 aa8.74□□□□□ -1.01
LSM5-205ENST00000409952 PARP9Q8IXQ6 854 aa8.73□□□□□ -1.01
LSM5-205ENST00000409952 RDH13Q8NBN7 331 aa8.73□□□□□ -1.01
LSM5-205ENST00000409952 BLOC1S3Q6QNY0 202 aa8.72□□□□□ -1.01
LSM5-205ENST00000409952 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
LSM5-205ENST00000409952 ZPR1O75312 459 aa8.71□□□□□ -1.02
LSM5-205ENST00000409952 SSTR3P32745 418 aaPredicted RBP8.7□□□□□ -1.02
LSM5-205ENST00000409952 PDE4DQ08499 809 aa8.7□□□□□ -1.02
LSM5-205ENST00000409952 FUT2Q10981 343 aa8.7□□□□□ -1.02
LSM5-205ENST00000409952 MORN1Q5T089 497 aa8.7□□□□□ -1.02
LSM5-205ENST00000409952 GIGYF2Q6Y7W6 1299 aaKnown RBP8.7□□□□□ -1.02
LSM5-205ENST00000409952 NPM2Q86SE8 214 aaKnown RBP8.7□□□□□ -1.02
LSM5-205ENST00000409952 ATP6V1AP38606 617 aa8.69□□□□□ -1.02
LSM5-205ENST00000409952 COPS2P61201 443 aa8.69□□□□□ -1.02
LSM5-205ENST00000409952 TTLL12Q14166 644 aaPredicted RBP8.68□□□□□ -1.02
LSM5-205ENST00000409952 NKX2-3Q8TAU0 364 aa8.68□□□□□ -1.02
LSM5-205ENST00000409952 KDM4AO75164 1064 aa8.67□□□□□ -1.02
LSM5-205ENST00000409952 NR1I2O75469 434 aa8.67□□□□□ -1.02
LSM5-205ENST00000409952 HRCP23327 699 aa8.67□□□□□ -1.02
LSM5-205ENST00000409952 USP46P62068 366 aa8.67□□□□□ -1.02
LSM5-205ENST00000409952 SCUBE3Q8IX30 993 aa8.67□□□□□ -1.02
LSM5-205ENST00000409952 THAP11Q96EK4 314 aa8.67□□□□□ -1.02
LSM5-205ENST00000409952 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
LSM5-205ENST00000409952 MS4A1P11836 297 aa8.66□□□□□ -1.02
LSM5-205ENST00000409952 PUS10Q3MIT2 529 aaKnown RBP8.66□□□□□ -1.02
LSM5-205ENST00000409952 Q6ZNB5 142 aa8.65□□□□□ -1.02
LSM5-205ENST00000409952 HOXA2O43364 376 aa8.64□□□□□ -1.03
LSM5-205ENST00000409952 SLC27A5Q9Y2P5 690 aa8.64□□□□□ -1.03
LSM5-205ENST00000409952 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
LSM5-205ENST00000409952 BRICD5Q6PL45 260 aa8.63□□□□□ -1.03
LSM5-205ENST00000409952 TLL1O43897 1013 aa8.62□□□□□ -1.03
LSM5-205ENST00000409952 ADH1BP00325 375 aa8.62□□□□□ -1.03
LSM5-205ENST00000409952 SPIRE2Q8WWL2 714 aa8.62□□□□□ -1.03
LSM5-205ENST00000409952 GPBP1L1Q9HC44 474 aaPredicted RBP8.62□□□□□ -1.03
LSM5-205ENST00000409952 PPP1R18Q6NYC8 613 aa8.61□□□□□ -1.03
LSM5-205ENST00000409952 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
LSM5-205ENST00000409952 BEGAINQ9BUH8 593 aa8.61□□□□□ -1.03
LSM5-205ENST00000409952 GJA5P36382 358 aa8.6□□□□□ -1.03
LSM5-205ENST00000409952 ARID3AQ99856 593 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms