RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 IPO9Q96P70 1041 aaKnown RBP4.98□□□□□ -1.61
RGPD1-202ENST00000409776 RRP9O43818 475 aaKnown RBP4.98□□□□□ -1.61
RGPD1-202ENST00000409776 ZWINTO95229 277 aa4.98□□□□□ -1.61
RGPD1-202ENST00000409776 MATR3P43243 847 aaKnown RBP eCLIP4.98□□□□□ -1.61
RGPD1-202ENST00000409776 TERF1P54274 439 aa4.98□□□□□ -1.61
RGPD1-202ENST00000409776 FEZ2Q9UHY8 353 aaPredicted RBP4.98□□□□□ -1.61
RGPD1-202ENST00000409776 SMC2O95347 1197 aa4.98□□□□□ -1.61
RGPD1-202ENST00000409776 TSR1Q2NL82 804 aaKnown RBP4.98□□□□□ -1.61
RGPD1-202ENST00000409776 KIAA1328Q86T90 577 aa4.98□□□□□ -1.61
RGPD1-202ENST00000409776 KCTD17Q8N5Z5 321 aa4.98□□□□□ -1.61
RGPD1-202ENST00000409776 CCDC97Q96F63 343 aaPredicted RBP4.98□□□□□ -1.61
RGPD1-202ENST00000409776 TRIM29Q14134 588 aa4.98□□□□□ -1.61
RGPD1-202ENST00000409776 PLCD3Q8N3E9 789 aa4.98□□□□□ -1.61
RGPD1-202ENST00000409776 CDK5RAP3Q96JB5 506 aa4.97□□□□□ -1.61
RGPD1-202ENST00000409776 GMNNO75496 209 aa4.97□□□□□ -1.61
RGPD1-202ENST00000409776 INF2Q27J81 1249 aa4.97□□□□□ -1.61
RGPD1-202ENST00000409776 SMC1AQ14683 1233 aaKnown RBP4.97□□□□□ -1.61
RGPD1-202ENST00000409776 CEP135Q66GS9 1140 aa4.97□□□□□ -1.61
RGPD1-202ENST00000409776 FERP16591 822 aa4.97□□□□□ -1.61
RGPD1-202ENST00000409776 BLVRAP53004 296 aa4.97□□□□□ -1.61
RGPD1-202ENST00000409776 ERCC4Q92889 916 aaPredicted RBP4.97□□□□□ -1.61
RGPD1-202ENST00000409776 IQCGQ9H095 443 aaKnown RBP4.97□□□□□ -1.61
RGPD1-202ENST00000409776 PLEKHD1A6NEE1 506 aa4.96□□□□□ -1.61
RGPD1-202ENST00000409776 LIG1P18858 919 aa4.96□□□□□ -1.61
RGPD1-202ENST00000409776 FGD1P98174 961 aa4.96□□□□□ -1.61
RGPD1-202ENST00000409776 DHX8Q14562 1220 aaKnown RBP4.96□□□□□ -1.61
RGPD1-202ENST00000409776 SHQ1Q6PI26 577 aaKnown RBP4.96□□□□□ -1.61
RGPD1-202ENST00000409776 CCDC174Q6PII3 467 aa4.96□□□□□ -1.61
RGPD1-202ENST00000409776 PRDM10Q9NQV6 1147 aa4.96□□□□□ -1.61
RGPD1-202ENST00000409776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.96□□□□□ -1.61
RGPD1-202ENST00000409776 KIF16BQ96L93 1317 aa4.96□□□□□ -1.61
RGPD1-202ENST00000409776 VIMP08670 466 aaKnown RBP4.96□□□□□ -1.62
RGPD1-202ENST00000409776 GZF1Q9H116 711 aaPredicted RBP4.96□□□□□ -1.62
RGPD1-202ENST00000409776 PPFIA3O75145 1194 aa4.96□□□□□ -1.62
RGPD1-202ENST00000409776 SLC4A2P04920 1241 aa4.96□□□□□ -1.62
RGPD1-202ENST00000409776 EZRP15311 586 aaKnown RBP4.96□□□□□ -1.62
RGPD1-202ENST00000409776 CSPP1Q1MSJ5 1256 aa4.96□□□□□ -1.62
RGPD1-202ENST00000409776 NAP1L2Q9ULW6 460 aaPredicted RBP4.96□□□□□ -1.62
RGPD1-202ENST00000409776 SH2D4BQ5SQS7 431 aa4.96□□□□□ -1.62
RGPD1-202ENST00000409776 PIAS4Q8N2W9 510 aaPredicted RBP4.96□□□□□ -1.62
RGPD1-202ENST00000409776 BICD1Q96G01 975 aa4.96□□□□□ -1.62
RGPD1-202ENST00000409776 ZBTB17Q13105 803 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 TMCO4Q5TGY1 634 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.95□□□□□ -1.62
RGPD1-202ENST00000409776 SREK1Q8WXA9 508 aaKnown RBP4.95□□□□□ -1.62
RGPD1-202ENST00000409776 NOP2P46087 812 aaKnown RBP4.95□□□□□ -1.62
RGPD1-202ENST00000409776 DDX11Q96FC9 970 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 NAP1L3Q99457 506 aaPredicted RBP4.95□□□□□ -1.62
RGPD1-202ENST00000409776 NAP1L4Q99733 375 aaKnown RBP4.95□□□□□ -1.62
RGPD1-202ENST00000409776 GTPBP4Q9BZE4 634 aaKnown RBP4.95□□□□□ -1.62
RGPD1-202ENST00000409776 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.95□□□□□ -1.62
RGPD1-202ENST00000409776 APLFQ8IW19 511 aaPredicted RBP4.95□□□□□ -1.62
RGPD1-202ENST00000409776 POTEB3A0JP26 581 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 SYCP1Q15431 976 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 CCDC6Q16204 474 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 POTEBQ6S5H4 581 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 DDX11L8A8MPP1 907 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 TRIM6-TRIM34B2RNG4 842 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 RFC1P35251 1148 aaPredicted RBP4.95□□□□□ -1.62
RGPD1-202ENST00000409776 SKIDA1Q1XH10 827 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 HOMER1Q86YM7 354 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 SMARCE1Q969G3 411 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 TRIM34Q9BYJ4 488 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 TTLL5Q6EMB2 1281 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 MIPOL1Q8TD10 442 aa4.95□□□□□ -1.62
RGPD1-202ENST00000409776 ATP6V1E1P36543 226 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 SMC6Q96SB8 1091 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.94□□□□□ -1.62
RGPD1-202ENST00000409776 SF3A1Q15459 793 aaKnown RBP4.94□□□□□ -1.62
RGPD1-202ENST00000409776 ERC1Q8IUD2 1116 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 FAM184AQ8NB25 1140 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 ZCRB1Q8TBF4 217 aaKnown RBP4.94□□□□□ -1.62
RGPD1-202ENST00000409776 TRIM55Q9BYV6 548 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 ANKRD62A6NC57 917 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 HSPA5P11021 654 aaKnown RBP4.94□□□□□ -1.62
RGPD1-202ENST00000409776 LRRC43Q8N309 656 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 RNF8O76064 485 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 GRM1Q13255 1194 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 RBBP5Q15291 538 aaKnown RBP4.94□□□□□ -1.62
RGPD1-202ENST00000409776 TCERG1LQ5VWI1 586 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 ANKRD18AQ8IVF6 992 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 GIMAP4Q9NUV9 329 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 NUB1Q9Y5A7 615 aa4.94□□□□□ -1.62
RGPD1-202ENST00000409776 RBM26Q5T8P6 1007 aaKnown RBP4.93□□□□□ -1.62
RGPD1-202ENST00000409776 IWS1Q96ST2 819 aa4.93□□□□□ -1.62
RGPD1-202ENST00000409776 PDCD7Q8N8D1 485 aaKnown RBP4.93□□□□□ -1.62
RGPD1-202ENST00000409776 TMF1P82094 1093 aa4.93□□□□□ -1.62
RGPD1-202ENST00000409776 UBE4AQ14139 1066 aa4.93□□□□□ -1.62
RGPD1-202ENST00000409776 H3BQV1 296 aa4.93□□□□□ -1.62
RGPD1-202ENST00000409776 MAP9Q49MG5 647 aa4.93□□□□□ -1.62
RGPD1-202ENST00000409776 SPOUT1Q5T280 376 aaKnown RBP4.93□□□□□ -1.62
RGPD1-202ENST00000409776 WWC2Q6AWC2 1192 aa4.93□□□□□ -1.62
RGPD1-202ENST00000409776 GCOM1H8Y6P7 765 aaPredicted RBP4.93□□□□□ -1.62
RGPD1-202ENST00000409776 MYZAPP0CAP1 466 aa4.93□□□□□ -1.62
RGPD1-202ENST00000409776 AIMP1Q12904 312 aaKnown RBP4.93□□□□□ -1.62
RGPD1-202ENST00000409776 FLOT2Q14254 428 aa4.93□□□□□ -1.62
RGPD1-202ENST00000409776 SH3BP5O60239 455 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 FOSL2P15408 326 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 UBTFP17480 764 aaKnown RBP4.92□□□□□ -1.62
RGPD1-202ENST00000409776 CEP120Q8N960 986 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms