RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TMEM134Q9H6X4 195 aa9.8□□□□□ -0.84
PMS1-203ENST00000409593 PHOX2BQ99453 314 aa9.8□□□□□ -0.84
PMS1-203ENST00000409593 HPS5Q9UPZ3 1129 aa9.8□□□□□ -0.84
PMS1-203ENST00000409593 SLC4A3P48751 1232 aa9.79□□□□□ -0.84
PMS1-203ENST00000409593 HCSTQ9UBK5 93 aa9.79□□□□□ -0.84
PMS1-203ENST00000409593 SLF2Q8IX21 1173 aa9.77□□□□□ -0.84
PMS1-203ENST00000409593 TSR3Q9UJK0 312 aaKnown RBP9.77□□□□□ -0.84
PMS1-203ENST00000409593 SLC24A3Q9HC58 644 aa9.77□□□□□ -0.85
PMS1-203ENST00000409593 WBP1LQ9NX94 342 aa9.77□□□□□ -0.85
PMS1-203ENST00000409593 PPP4CP60510 307 aa9.76□□□□□ -0.85
PMS1-203ENST00000409593 TPRNQ4KMQ1 711 aa9.75□□□□□ -0.85
PMS1-203ENST00000409593 MDM2Q00987 491 aaPredicted RBP9.74□□□□□ -0.85
PMS1-203ENST00000409593 AK7Q96M32 723 aa9.74□□□□□ -0.85
PMS1-203ENST00000409593 DAXXQ9UER7 740 aaPredicted RBP9.73□□□□□ -0.85
PMS1-203ENST00000409593 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
PMS1-203ENST00000409593 NECTIN2Q92692 538 aa9.72□□□□□ -0.85
PMS1-203ENST00000409593 DDX11L8A8MPP1 907 aa9.71□□□□□ -0.85
PMS1-203ENST00000409593 RDH13Q8NBN7 331 aa9.71□□□□□ -0.86
PMS1-203ENST00000409593 TRIM66O15016 1216 aa9.7□□□□□ -0.86
PMS1-203ENST00000409593 GPCPD1Q9NPB8 672 aa9.7□□□□□ -0.86
PMS1-203ENST00000409593 CLCN1P35523 988 aa9.69□□□□□ -0.86
PMS1-203ENST00000409593 NYAP1Q6ZVC0 841 aa9.69□□□□□ -0.86
PMS1-203ENST00000409593 CFHP08603 1231 aa9.68□□□□□ -0.86
PMS1-203ENST00000409593 SLC10A3P09131 477 aa9.68□□□□□ -0.86
PMS1-203ENST00000409593 RSPH4AQ5TD94 716 aa9.68□□□□□ -0.86
PMS1-203ENST00000409593 SULF1Q8IWU6 871 aa9.68□□□□□ -0.86
PMS1-203ENST00000409593 AMHR2Q16671 573 aa9.67□□□□□ -0.86
PMS1-203ENST00000409593 APLP1P51693 650 aa9.67□□□□□ -0.86
PMS1-203ENST00000409593 PLA2G2EQ9NZK7 142 aa9.66□□□□□ -0.86
PMS1-203ENST00000409593 KMT5BQ4FZB7 885 aa9.65□□□□□ -0.86
PMS1-203ENST00000409593 REPIN1Q9BWE0 567 aaKnown RBP9.65□□□□□ -0.86
PMS1-203ENST00000409593 PRR14Q9BWN1 585 aa9.64□□□□□ -0.87
PMS1-203ENST00000409593 PDE4DQ08499 809 aa9.64□□□□□ -0.87
PMS1-203ENST00000409593 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
PMS1-203ENST00000409593 PARP9Q8IXQ6 854 aa9.64□□□□□ -0.87
PMS1-203ENST00000409593 TMUB1Q9BVT8 246 aa9.62□□□□□ -0.87
PMS1-203ENST00000409593 FAM217BQ9NTX9 383 aaPredicted RBP9.62□□□□□ -0.87
PMS1-203ENST00000409593 PRKCSHP14314 528 aaPredicted RBP9.61□□□□□ -0.87
PMS1-203ENST00000409593 CD46P15529 392 aa9.61□□□□□ -0.87
PMS1-203ENST00000409593 PCDHB3Q9Y5E6 796 aa9.61□□□□□ -0.87
PMS1-203ENST00000409593 SSTR3P32745 418 aaPredicted RBP9.6□□□□□ -0.87
PMS1-203ENST00000409593 ACTN4O43707 911 aaKnown RBP9.59□□□□□ -0.87
PMS1-203ENST00000409593 COPS2P61201 443 aa9.59□□□□□ -0.87
PMS1-203ENST00000409593 MTRQ99707 1265 aa9.59□□□□□ -0.87
PMS1-203ENST00000409593 GCGRP47871 477 aa9.58□□□□□ -0.88
PMS1-203ENST00000409593 FUT2Q10981 343 aa9.57□□□□□ -0.88
PMS1-203ENST00000409593 PUS10Q3MIT2 529 aaKnown RBP9.56□□□□□ -0.88
PMS1-203ENST00000409593 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
PMS1-203ENST00000409593 MS4A1P11836 297 aa9.55□□□□□ -0.88
PMS1-203ENST00000409593 IL21Q9HBE4 155 aa9.55□□□□□ -0.88
PMS1-203ENST00000409593 GPBP1L1Q9HC44 474 aaPredicted RBP9.55□□□□□ -0.88
PMS1-203ENST00000409593 KDM4AO75164 1064 aa9.55□□□□□ -0.88
PMS1-203ENST00000409593 ITGBL1O95965 494 aaPredicted RBP9.55□□□□□ -0.88
PMS1-203ENST00000409593 KCNC4Q03721 635 aa9.55□□□□□ -0.88
PMS1-203ENST00000409593 TJAP1Q5JTD0 557 aa9.55□□□□□ -0.88
PMS1-203ENST00000409593 NUTM1Q86Y26 1132 aa9.54□□□□□ -0.88
PMS1-203ENST00000409593 BEGAINQ9BUH8 593 aa9.54□□□□□ -0.88
PMS1-203ENST00000409593 ATP6V1AP38606 617 aa9.52□□□□□ -0.89
PMS1-203ENST00000409593 NEUROD2Q15784 382 aa9.52□□□□□ -0.89
PMS1-203ENST00000409593 ZNF516Q92618 1163 aa9.52□□□□□ -0.89
PMS1-203ENST00000409593 GRIPAP1Q4V328 841 aa9.51□□□□□ -0.89
PMS1-203ENST00000409593 KDM4CQ9H3R0 1056 aa9.51□□□□□ -0.89
PMS1-203ENST00000409593 NR1I2O75469 434 aa9.51□□□□□ -0.89
PMS1-203ENST00000409593 ZPR1O75312 459 aa9.5□□□□□ -0.89
PMS1-203ENST00000409593 TLL1O43897 1013 aa9.49□□□□□ -0.89
PMS1-203ENST00000409593 USP46P62068 366 aa9.49□□□□□ -0.89
PMS1-203ENST00000409593 MORN1Q5T089 497 aa9.49□□□□□ -0.89
PMS1-203ENST00000409593 HOXA2O43364 376 aa9.48□□□□□ -0.89
PMS1-203ENST00000409593 HLA-CQ95604 372 aa9.48□□□□□ -0.89
PMS1-203ENST00000409593 SCUBE3Q8IX30 993 aa9.48□□□□□ -0.89
PMS1-203ENST00000409593 SPIRE2Q8WWL2 714 aa9.48□□□□□ -0.89
PMS1-203ENST00000409593 SLC27A5Q9Y2P5 690 aa9.48□□□□□ -0.89
PMS1-203ENST00000409593 BRPF1P55201 1214 aaPredicted RBP9.46□□□□□ -0.89
PMS1-203ENST00000409593 GUCA2AQ02747 115 aa9.46□□□□□ -0.89
PMS1-203ENST00000409593 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.89
PMS1-203ENST00000409593 IFFO2Q5TF58 517 aa9.45□□□□□ -0.9
PMS1-203ENST00000409593 TBC1D2Q9BYX2 928 aa9.45□□□□□ -0.9
PMS1-203ENST00000409593 DIXDC1Q155Q3 683 aa9.44□□□□□ -0.9
PMS1-203ENST00000409593 FAM117AQ9C073 453 aa9.44□□□□□ -0.9
PMS1-203ENST00000409593 MOXD2PA6NHM9 499 aa9.43□□□□□ -0.9
PMS1-203ENST00000409593 NDUFV2P19404 249 aa9.43□□□□□ -0.9
PMS1-203ENST00000409593 ADH1BP00325 375 aa9.42□□□□□ -0.9
PMS1-203ENST00000409593 FDX1P10109 184 aa9.42□□□□□ -0.9
PMS1-203ENST00000409593 RNF19BQ6ZMZ0 732 aa9.42□□□□□ -0.9
PMS1-203ENST00000409593 DDRGK1Q96HY6 314 aa9.42□□□□□ -0.9
PMS1-203ENST00000409593 SPSB2Q99619 263 aa9.42□□□□□ -0.9
PMS1-203ENST00000409593 A0A0G2JS52 829 aa9.42□□□□□ -0.9
PMS1-203ENST00000409593 FMNL1O95466 1100 aaPredicted RBP9.42□□□□□ -0.9
PMS1-203ENST00000409593 Q3C1V9 767 aa9.42□□□□□ -0.9
PMS1-203ENST00000409593 RGS20O76081 388 aa9.39□□□□□ -0.91
PMS1-203ENST00000409593 MYSM1Q5VVJ2 828 aa9.39□□□□□ -0.91
PMS1-203ENST00000409593 THAP11Q96EK4 314 aa9.39□□□□□ -0.91
PMS1-203ENST00000409593 IRX2Q9BZI1 471 aaPredicted RBP9.39□□□□□ -0.91
PMS1-203ENST00000409593 S1PR4O95977 384 aa9.39□□□□□ -0.91
PMS1-203ENST00000409593 GGCXP38435 758 aa9.39□□□□□ -0.91
PMS1-203ENST00000409593 PPP1R18Q6NYC8 613 aa9.39□□□□□ -0.91
PMS1-203ENST00000409593 RSBN1LQ6PCB5 846 aaPredicted RBP9.39□□□□□ -0.91
PMS1-203ENST00000409593 BRICD5Q6PL45 260 aa9.39□□□□□ -0.91
PMS1-203ENST00000409593 SYMPKQ92797 1274 aaKnown RBP9.39□□□□□ -0.91
PMS1-203ENST00000409593 SLC6A16Q9GZN6 736 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms