RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 ADGRF5Q8IZF2 1346 aa14.75□□□□□ -0.05
ITGA6-203ENST00000409532 ZCCHC11Q5TAX3 1644 aaKnown RBP14.75□□□□□ -0.05
ITGA6-203ENST00000409532 SCAPERQ9BY12 1400 aa14.74□□□□□ -0.05
ITGA6-203ENST00000409532 NEUROD2Q15784 382 aa14.74□□□□□ -0.05
ITGA6-203ENST00000409532 RGS3P49796 1198 aa14.74□□□□□ -0.05
ITGA6-203ENST00000409532 SLC4A3P48751 1232 aa14.74□□□□□ -0.05
ITGA6-203ENST00000409532 ABCC1P33527 1531 aa14.73□□□□□ -0.05
ITGA6-203ENST00000409532 ZMYM4Q5VZL5 1548 aa14.73□□□□□ -0.05
ITGA6-203ENST00000409532 SHROOM2Q13796 1616 aa14.73□□□□□ -0.05
ITGA6-203ENST00000409532 SCAF11Q99590 1463 aaKnown RBP14.72□□□□□ -0.05
ITGA6-203ENST00000409532 LAMC1P11047 1609 aa14.72□□□□□ -0.05
ITGA6-203ENST00000409532 BCAR3O75815 825 aa14.72□□□□□ -0.05
ITGA6-203ENST00000409532 KANK1Q14678 1352 aa14.72□□□□□ -0.05
ITGA6-203ENST00000409532 UGGT1Q9NYU2 1555 aa14.72□□□□□ -0.05
ITGA6-203ENST00000409532 MS4A1P11836 297 aa14.71□□□□□ -0.05
ITGA6-203ENST00000409532 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
ITGA6-203ENST00000409532 MADDQ8WXG6 1647 aa14.71□□□□□ -0.05
ITGA6-203ENST00000409532 NUTM2DQ5VT03 806 aaPredicted RBP14.71□□□□□ -0.06
ITGA6-203ENST00000409532 TRAK1Q9UPV9 953 aa14.71□□□□□ -0.06
ITGA6-203ENST00000409532 CARD14Q9BXL6 1004 aa14.7□□□□□ -0.06
ITGA6-203ENST00000409532 NEFMP07197 916 aa14.7□□□□□ -0.06
ITGA6-203ENST00000409532 CLTCL1P53675 1640 aa14.7□□□□□ -0.06
ITGA6-203ENST00000409532 SLFN5Q08AF3 891 aa14.69□□□□□ -0.06
ITGA6-203ENST00000409532 RRP7AQ9Y3A4 280 aaKnown RBP14.69□□□□□ -0.06
ITGA6-203ENST00000409532 RNF17Q9BXT8 1623 aaKnown RBP14.68□□□□□ -0.06
ITGA6-203ENST00000409532 TMEM132EQ6IEE7 984 aa14.68□□□□□ -0.06
ITGA6-203ENST00000409532 GGT6Q6P531 493 aa14.68□□□□□ -0.06
ITGA6-203ENST00000409532 CFAP65Q6ZU64 1925 aaKnown RBP14.68□□□□□ -0.06
ITGA6-203ENST00000409532 ASXL1Q8IXJ9 1541 aa14.68□□□□□ -0.06
ITGA6-203ENST00000409532 EIF3AQ14152 1382 aaKnown RBP14.68□□□□□ -0.06
ITGA6-203ENST00000409532 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.67□□□□□ -0.06
ITGA6-203ENST00000409532 ZNF521Q96K83 1311 aa14.67□□□□□ -0.06
ITGA6-203ENST00000409532 FANCAO15360 1455 aa14.67□□□□□ -0.06
ITGA6-203ENST00000409532 TRPM2O94759 1503 aa14.66□□□□□ -0.06
ITGA6-203ENST00000409532 ZFYVE16Q7Z3T8 1539 aa14.66□□□□□ -0.06
ITGA6-203ENST00000409532 IQGAP1P46940 1657 aa14.66□□□□□ -0.06
ITGA6-203ENST00000409532 SLC12A5Q9H2X9 1139 aa14.66□□□□□ -0.06
ITGA6-203ENST00000409532 SPHKAPQ2M3C7 1700 aa14.65□□□□□ -0.06
ITGA6-203ENST00000409532 CANXP27824 592 aaKnown RBP14.65□□□□□ -0.06
ITGA6-203ENST00000409532 CENPQQ7L2Z9 268 aaPredicted RBP14.65□□□□□ -0.06
ITGA6-203ENST00000409532 PTPRTO14522 1441 aa14.65□□□□□ -0.06
ITGA6-203ENST00000409532 KDM2BQ8NHM5 1336 aa14.65□□□□□ -0.06
ITGA6-203ENST00000409532 FRAT1Q92837 279 aaPredicted RBP14.65□□□□□ -0.06
ITGA6-203ENST00000409532 INSRP06213 1382 aa14.64□□□□□ -0.07
ITGA6-203ENST00000409532 SAFB2Q14151 953 aaKnown RBP eCLIP14.63□□□□□ -0.07
ITGA6-203ENST00000409532 RTEL1-TNFRSF6BF6WH68 1400 aa14.63□□□□□ -0.07
ITGA6-203ENST00000409532 ADGRL1O94910 1474 aa14.63□□□□□ -0.07
ITGA6-203ENST00000409532 MORC1Q86VD1 984 aa14.63□□□□□ -0.07
ITGA6-203ENST00000409532 DAXXQ9UER7 740 aaPredicted RBP14.63□□□□□ -0.07
ITGA6-203ENST00000409532 ATP7AQ04656 1500 aa14.62□□□□□ -0.07
ITGA6-203ENST00000409532 SYNMO15061 1565 aa14.62□□□□□ -0.07
ITGA6-203ENST00000409532 PANK1Q8TE04 598 aa14.62□□□□□ -0.07
ITGA6-203ENST00000409532 CEP152O94986 1710 aa14.62□□□□□ -0.07
ITGA6-203ENST00000409532 STAC3Q96MF2 364 aa14.62□□□□□ -0.07
ITGA6-203ENST00000409532 BCL2L13Q9BXK5 485 aa14.62□□□□□ -0.07
ITGA6-203ENST00000409532 COG6Q9Y2V7 657 aa14.62□□□□□ -0.07
ITGA6-203ENST00000409532 PIK3C2GO75747 1445 aa14.62□□□□□ -0.07
ITGA6-203ENST00000409532 ERVK-7P63135 1459 aa14.61□□□□□ -0.07
ITGA6-203ENST00000409532 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
ITGA6-203ENST00000409532 NOS1P29475 1434 aa14.6□□□□□ -0.07
ITGA6-203ENST00000409532 E9PSI1 815 aa14.6□□□□□ -0.07
ITGA6-203ENST00000409532 UHRF1BP1LA0JNW5 1464 aa14.59□□□□□ -0.07
ITGA6-203ENST00000409532 MYOM1P52179 1685 aa14.59□□□□□ -0.07
ITGA6-203ENST00000409532 IGHDP01880 384 aa14.59□□□□□ -0.07
ITGA6-203ENST00000409532 FAM161AQ3B820 660 aa14.59□□□□□ -0.07
ITGA6-203ENST00000409532 TET3O43151 1660 aa14.58□□□□□ -0.07
ITGA6-203ENST00000409532 C8orf34Q49A92 452 aa14.58□□□□□ -0.07
ITGA6-203ENST00000409532 WWC1Q8IX03 1113 aa14.58□□□□□ -0.07
ITGA6-203ENST00000409532 KDM5AP29375 1690 aaKnown RBP14.58□□□□□ -0.08
ITGA6-203ENST00000409532 TRMT2AQ8IZ69 625 aaKnown RBP14.58□□□□□ -0.08
ITGA6-203ENST00000409532 NKTRP30414 1462 aaKnown RBP14.58□□□□□ -0.08
ITGA6-203ENST00000409532 DDRGK1Q96HY6 314 aa14.58□□□□□ -0.08
ITGA6-203ENST00000409532 NSD3Q9BZ95 1437 aa14.57□□□□□ -0.08
ITGA6-203ENST00000409532 CLUAP1Q96AJ1 413 aa14.57□□□□□ -0.08
ITGA6-203ENST00000409532 TNNQ9UQP3 1299 aa14.57□□□□□ -0.08
ITGA6-203ENST00000409532 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
ITGA6-203ENST00000409532 MTHFSP49914 203 aa14.56□□□□□ -0.08
ITGA6-203ENST00000409532 ABCA6Q8N139 1617 aa14.56□□□□□ -0.08
ITGA6-203ENST00000409532 TCP11L2Q8N4U5 519 aa14.56□□□□□ -0.08
ITGA6-203ENST00000409532 NPC1L1Q9UHC9 1359 aa14.55□□□□□ -0.08
ITGA6-203ENST00000409532 PPM1GO15355 546 aaPredicted RBP14.55□□□□□ -0.08
ITGA6-203ENST00000409532 STK26Q9P289 416 aa14.55□□□□□ -0.08
ITGA6-203ENST00000409532 MAP3K4Q9Y6R4 1608 aa14.54□□□□□ -0.08
ITGA6-203ENST00000409532 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
ITGA6-203ENST00000409532 ASXL2Q76L83 1435 aa14.54□□□□□ -0.08
ITGA6-203ENST00000409532 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
ITGA6-203ENST00000409532 DEPDC5O75140 1603 aa14.54□□□□□ -0.08
ITGA6-203ENST00000409532 CABP2Q9NPB3 220 aa14.53□□□□□ -0.08
ITGA6-203ENST00000409532 INO80Q9ULG1 1556 aaPredicted RBP14.52□□□□□ -0.08
ITGA6-203ENST00000409532 KIF1BO60333 1816 aa14.52□□□□□ -0.08
ITGA6-203ENST00000409532 SLC24A1O60721 1099 aa14.52□□□□□ -0.08
ITGA6-203ENST00000409532 U2AF1L5P0DN76 240 aaPredicted RBP14.52□□□□□ -0.09
ITGA6-203ENST00000409532 U2AF1Q01081 240 aaKnown RBP eCLIP14.52□□□□□ -0.09
ITGA6-203ENST00000409532 RAPGEF3O95398 923 aa14.52□□□□□ -0.09
ITGA6-203ENST00000409532 NFKBIBQ15653 356 aa14.52□□□□□ -0.09
ITGA6-203ENST00000409532 MROH2AA6NES4 1674 aa14.51□□□□□ -0.09
ITGA6-203ENST00000409532 IL27Q8NEV9 243 aa14.51□□□□□ -0.09
ITGA6-203ENST00000409532 RUNDC1Q96C34 613 aa14.51□□□□□ -0.09
ITGA6-203ENST00000409532 C14orf93Q9H972 538 aaKnown RBP14.5□□□□□ -0.09
ITGA6-203ENST00000409532 MROH1Q8NDA8 1641 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms