RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 SF3A1Q15459 793 aaKnown RBP30.9■■■□□ 2.54
SPIRE1-202ENST00000409402 AFAP1Q8N556 730 aa30.9■■■□□ 2.54
SPIRE1-202ENST00000409402 DIAPH3Q9NSV4 1193 aa30.9■■■□□ 2.54
SPIRE1-202ENST00000409402 CENPQQ7L2Z9 268 aaPredicted RBP30.9■■■□□ 2.54
SPIRE1-202ENST00000409402 VPS37DQ86XT2 251 aa30.89■■■□□ 2.54
SPIRE1-202ENST00000409402 CASKIN1Q8WXD9 1431 aa30.89■■■□□ 2.54
SPIRE1-202ENST00000409402 SYNE3Q6ZMZ3 975 aa30.89■■■□□ 2.54
SPIRE1-202ENST00000409402 FOXD4L1Q9NU39 408 aa30.89■■■□□ 2.54
SPIRE1-202ENST00000409402 RTN4Q9NQC3 1192 aaKnown RBP30.88■■■□□ 2.53
SPIRE1-202ENST00000409402 RUNDC1Q96C34 613 aa30.88■■■□□ 2.53
SPIRE1-202ENST00000409402 FKBP5Q13451 457 aaPredicted RBP30.87■■■□□ 2.53
SPIRE1-202ENST00000409402 ROCK1Q13464 1354 aa30.87■■■□□ 2.53
SPIRE1-202ENST00000409402 GPRASP1Q5JY77 1395 aa30.87■■■□□ 2.53
SPIRE1-202ENST00000409402 TSPYL4Q9UJ04 414 aa30.87■■■□□ 2.53
SPIRE1-202ENST00000409402 DDX19BQ9UMR2 479 aa30.87■■■□□ 2.53
SPIRE1-202ENST00000409402 H3BQV1 296 aa30.86■■■□□ 2.53
SPIRE1-202ENST00000409402 IFFO2Q5TF58 517 aa30.86■■■□□ 2.53
SPIRE1-202ENST00000409402 RUFY2Q8WXA3 655 aa30.86■■■□□ 2.53
SPIRE1-202ENST00000409402 CABP2Q9NPB3 220 aa30.86■■■□□ 2.53
SPIRE1-202ENST00000409402 IFIT2P09913 472 aaKnown RBP30.86■■■□□ 2.53
SPIRE1-202ENST00000409402 TXNDC2Q86VQ3 553 aa30.86■■■□□ 2.53
SPIRE1-202ENST00000409402 NCOA2Q15596 1464 aa30.85■■■□□ 2.53
SPIRE1-202ENST00000409402 NLRP6P59044 892 aa30.85■■■□□ 2.53
SPIRE1-202ENST00000409402 IFT140Q96RY7 1462 aa30.85■■■□□ 2.53
SPIRE1-202ENST00000409402 GNAI1P63096 354 aa30.84■■■□□ 2.53
SPIRE1-202ENST00000409402 FAM184AQ8NB25 1140 aa30.84■■■□□ 2.53
SPIRE1-202ENST00000409402 NUTM2GQ5VZR2 741 aa30.84■■■□□ 2.53
SPIRE1-202ENST00000409402 LRRC9Q6ZRR7 1453 aa30.84■■■□□ 2.53
SPIRE1-202ENST00000409402 TMEM132EQ6IEE7 984 aa30.84■■■□□ 2.53
SPIRE1-202ENST00000409402 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.84■■■□□ 2.53
SPIRE1-202ENST00000409402 COG6Q9Y2V7 657 aa30.83■■■□□ 2.53
SPIRE1-202ENST00000409402 RRBP1Q9P2E9 1410 aaKnown RBP30.83■■■□□ 2.53
SPIRE1-202ENST00000409402 CTDP1Q9Y5B0 961 aaPredicted RBP30.83■■■□□ 2.53
SPIRE1-202ENST00000409402 CREBRFQ8IUR6 639 aa30.82■■■□□ 2.52
SPIRE1-202ENST00000409402 G3BP1Q13283 466 aaKnown RBP eCLIP30.82■■■□□ 2.52
SPIRE1-202ENST00000409402 GGNBP2Q9H3C7 697 aa30.82■■■□□ 2.52
SPIRE1-202ENST00000409402 PLIN1O60240 522 aa30.82■■■□□ 2.52
SPIRE1-202ENST00000409402 PROSER2Q86WR7 435 aaPredicted RBP30.81■■■□□ 2.52
SPIRE1-202ENST00000409402 HMOX1P09601 288 aa30.8■■■□□ 2.52
SPIRE1-202ENST00000409402 RRP1P56182 461 aaKnown RBP30.8■■■□□ 2.52
SPIRE1-202ENST00000409402 FBXW7Q969H0 707 aa30.8■■■□□ 2.52
SPIRE1-202ENST00000409402 NOC3LQ8WTT2 800 aaKnown RBP30.8■■■□□ 2.52
SPIRE1-202ENST00000409402 ZBED9Q6R2W3 1325 aa30.79■■■□□ 2.52
SPIRE1-202ENST00000409402 CPLX2Q6PUV4 134 aaKnown RBP30.79■■■□□ 2.52
SPIRE1-202ENST00000409402 RAD21O60216 631 aa30.78■■■□□ 2.52
SPIRE1-202ENST00000409402 DZIP1LQ8IYY4 767 aaKnown RBP30.78■■■□□ 2.52
SPIRE1-202ENST00000409402 ESCO1Q5FWF5 840 aa30.78■■■□□ 2.52
SPIRE1-202ENST00000409402 PHF14O94880 888 aa30.77■■■□□ 2.52
SPIRE1-202ENST00000409402 APPP05067 770 aa30.77■■■□□ 2.52
SPIRE1-202ENST00000409402 THEMISQ8N1K5 641 aaPredicted RBP30.76■■■□□ 2.51
SPIRE1-202ENST00000409402 KIF21BO75037 1637 aa30.76■■■□□ 2.51
SPIRE1-202ENST00000409402 RBM33Q96EV2 1170 aaKnown RBP30.76■■■□□ 2.51
SPIRE1-202ENST00000409402 CRBNQ96SW2 442 aa30.76■■■□□ 2.51
SPIRE1-202ENST00000409402 RIC3Q7Z5B4 369 aa30.75■■■□□ 2.51
SPIRE1-202ENST00000409402 ABTB2Q8N961 1025 aa30.75■■■□□ 2.51
SPIRE1-202ENST00000409402 ZKSCAN1P17029 563 aaPredicted RBP30.75■■■□□ 2.51
SPIRE1-202ENST00000409402 PHF23Q9BUL5 403 aaPredicted RBP30.75■■■□□ 2.51
SPIRE1-202ENST00000409402 KLHL34Q8N239 644 aa30.74■■■□□ 2.51
SPIRE1-202ENST00000409402 HSP90AB4PQ58FF6 505 aa30.73■■■□□ 2.51
SPIRE1-202ENST00000409402 FOXD4L5Q5VV16 416 aaPredicted RBP30.73■■■□□ 2.51
SPIRE1-202ENST00000409402 FOXD4L4Q8WXT5 416 aaPredicted RBP30.73■■■□□ 2.51
SPIRE1-202ENST00000409402 IPO9Q96P70 1041 aaKnown RBP30.73■■■□□ 2.51
SPIRE1-202ENST00000409402 TCEAL9Q9UHQ7 104 aa30.73■■■□□ 2.51
SPIRE1-202ENST00000409402 ATP6V1DQ9Y5K8 247 aa30.72■■■□□ 2.51
SPIRE1-202ENST00000409402 CFTRP13569 1480 aa30.72■■■□□ 2.51
SPIRE1-202ENST00000409402 PLEKHH2Q8IVE3 1493 aa30.72■■■□□ 2.51
SPIRE1-202ENST00000409402 REC8O95072 547 aa30.71■■■□□ 2.51
SPIRE1-202ENST00000409402 FAM161AQ3B820 660 aa30.71■■■□□ 2.51
SPIRE1-202ENST00000409402 AMER1Q5JTC6 1135 aaPredicted RBP30.7■■■□□ 2.51
SPIRE1-202ENST00000409402 EXOC6Q8TAG9 804 aa30.7■■■□□ 2.51
SPIRE1-202ENST00000409402 GOLGA6L3A6NEY3 463 aa30.7■■■□□ 2.5
SPIRE1-202ENST00000409402 NESP48681 1621 aa30.69■■■□□ 2.5
SPIRE1-202ENST00000409402 TRIM29Q14134 588 aa30.69■■■□□ 2.5
SPIRE1-202ENST00000409402 TRDNQ13061 729 aa30.69■■■□□ 2.5
SPIRE1-202ENST00000409402 CEP89Q96ST8 783 aa30.68■■■□□ 2.5
SPIRE1-202ENST00000409402 AIMP1Q12904 312 aaKnown RBP30.68■■■□□ 2.5
SPIRE1-202ENST00000409402 CFAP70Q5T0N1 1121 aa30.68■■■□□ 2.5
SPIRE1-202ENST00000409402 TPD52L1Q16890 204 aaPredicted RBP30.67■■■□□ 2.5
SPIRE1-202ENST00000409402 CCDC7Q96M83 1385 aa30.67■■■□□ 2.5
SPIRE1-202ENST00000409402 KIF7Q2M1P5 1343 aa30.67■■■□□ 2.5
SPIRE1-202ENST00000409402 DEKP35659 375 aaKnown RBP30.67■■■□□ 2.5
SPIRE1-202ENST00000409402 DHX16O60231 1041 aaKnown RBP30.66■■■□□ 2.5
SPIRE1-202ENST00000409402 ANO2Q9NQ90 1003 aa30.66■■■□□ 2.5
SPIRE1-202ENST00000409402 RNF20Q5VTR2 975 aa30.66■■■□□ 2.5
SPIRE1-202ENST00000409402 WASHC2AQ641Q2 1341 aa30.65■■■□□ 2.5
SPIRE1-202ENST00000409402 MCTP1Q6DN14 999 aa30.64■■■□□ 2.5
SPIRE1-202ENST00000409402 GAS2L2Q8NHY3 880 aa30.64■■■□□ 2.5
SPIRE1-202ENST00000409402 PLEKHO1Q53GL0 409 aaPredicted RBP30.64■■■□□ 2.49
SPIRE1-202ENST00000409402 CPLX1O14810 134 aa30.63■■■□□ 2.49
SPIRE1-202ENST00000409402 USP35Q9P2H5 1018 aa30.63■■■□□ 2.49
SPIRE1-202ENST00000409402 SMG6Q86US8 1419 aaKnown RBP30.63■■■□□ 2.49
SPIRE1-202ENST00000409402 PRAM1Q96QH2 718 aa30.63■■■□□ 2.49
SPIRE1-202ENST00000409402 PES1O00541 588 aaKnown RBP30.62■■■□□ 2.49
SPIRE1-202ENST00000409402 ERC2O15083 957 aa30.62■■■□□ 2.49
SPIRE1-202ENST00000409402 ERICH3Q5RHP9 1530 aa30.62■■■□□ 2.49
SPIRE1-202ENST00000409402 TPM3P06753 285 aa30.62■■■□□ 2.49
SPIRE1-202ENST00000409402 SCAPERQ9BY12 1400 aa30.62■■■□□ 2.49
SPIRE1-202ENST00000409402 ERICH2A1L162 156 aa30.61■■■□□ 2.49
SPIRE1-202ENST00000409402 CC2D2AQ9P2K1 1620 aa30.61■■■□□ 2.49
SPIRE1-202ENST00000409402 DDX11L8A8MPP1 907 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms