RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 CARMIL2Q6F5E8 1435 aa4.13□□□□□ -1.75
NEB-204ENST00000409198 IBSPP21815 317 aaPredicted RBP4.12□□□□□ -1.75
NEB-204ENST00000409198 STAC3Q96MF2 364 aa4.12□□□□□ -1.75
NEB-204ENST00000409198 BRMS1Q9HCU9 246 aa4.12□□□□□ -1.75
NEB-204ENST00000409198 TCERG1O14776 1098 aaKnown RBP4.12□□□□□ -1.75
NEB-204ENST00000409198 SLC3A2P08195 630 aaKnown RBP4.12□□□□□ -1.75
NEB-204ENST00000409198 SART3Q15020 963 aaKnown RBP4.12□□□□□ -1.75
NEB-204ENST00000409198 SAFBQ15424 915 aaKnown RBP eCLIP4.12□□□□□ -1.75
NEB-204ENST00000409198 CCDC27Q2M243 656 aa4.12□□□□□ -1.75
NEB-204ENST00000409198 EZRP15311 586 aaKnown RBP4.12□□□□□ -1.75
NEB-204ENST00000409198 XBP1P17861 261 aa4.12□□□□□ -1.75
NEB-204ENST00000409198 CA8P35219 290 aa4.12□□□□□ -1.75
NEB-204ENST00000409198 ANKRD62A6NC57 917 aa4.12□□□□□ -1.75
NEB-204ENST00000409198 UQCRHLA0A096LP55 91 aa4.12□□□□□ -1.75
NEB-204ENST00000409198 PHF14O94880 888 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 TEFQ10587 303 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 CCAR2Q8N163 923 aaKnown RBP4.11□□□□□ -1.75
NEB-204ENST00000409198 PSME1Q06323 249 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 TERF2IPQ9NYB0 399 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 MAPK8IP2Q13387 824 aaPredicted RBP4.11□□□□□ -1.75
NEB-204ENST00000409198 E9PSI1 815 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 FAM161AQ3B820 660 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 DMRT2Q9Y5R5 561 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 TTLL12Q14166 644 aaPredicted RBP4.11□□□□□ -1.75
NEB-204ENST00000409198 DDX58O95786 925 aaKnown RBP4.11□□□□□ -1.75
NEB-204ENST00000409198 FEZ1Q99689 392 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 BCL11BQ9C0K0 894 aaPredicted RBP4.11□□□□□ -1.75
NEB-204ENST00000409198 NGEFQ8N5V2 710 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 BECN2A8MW95 431 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 CPLX1O14810 134 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 MYCNP04198 464 aaPredicted RBP4.11□□□□□ -1.75
NEB-204ENST00000409198 RSPH4AQ5TD94 716 aa4.11□□□□□ -1.75
NEB-204ENST00000409198 B4GALNT3Q6L9W6 998 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 SLC4A10Q6U841 1118 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 MATR3P43243 847 aaKnown RBP eCLIP4.1□□□□□ -1.75
NEB-204ENST00000409198 SSX2IPQ9Y2D8 614 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 FYB1O15117 783 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 ERLIN2O94905 339 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 ACBD3Q9H3P7 528 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 CECR2Q9BXF3 1484 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 PPP4R3AQ6IN85 833 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 RUFY2Q8WXA3 655 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 TNIP1Q15025 636 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 HSP90AA2PQ14568 343 aaPredicted RBP4.1□□□□□ -1.75
NEB-204ENST00000409198 ERC1Q8IUD2 1116 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 STAMBPO95630 424 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 NACADO15069 1562 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 MPHOSPH6Q99547 160 aaKnown RBP4.1□□□□□ -1.75
NEB-204ENST00000409198 TMOD2Q9NZR1 351 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 LRSAM1Q6UWE0 723 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 ZCCHC6Q5VYS8 1495 aaKnown RBP4.1□□□□□ -1.75
NEB-204ENST00000409198 POTEJP0CG39 1038 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 CDK5RAP3Q96JB5 506 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 RWDD1Q9H446 243 aaPredicted RBP4.1□□□□□ -1.75
NEB-204ENST00000409198 PPM1EQ8WY54 764 aa4.1□□□□□ -1.75
NEB-204ENST00000409198 ZBTB24O43167 697 aaPredicted RBP4.1□□□□□ -1.75
NEB-204ENST00000409198 RBM5P52756 815 aaKnown RBP eCLIP4.1□□□□□ -1.75
NEB-204ENST00000409198 GBP2P32456 591 aaPredicted RBP4.09□□□□□ -1.75
NEB-204ENST00000409198 MCTP1Q6DN14 999 aa4.09□□□□□ -1.75
NEB-204ENST00000409198 MFAP1P55081 439 aaKnown RBP4.09□□□□□ -1.75
NEB-204ENST00000409198 SLKQ9H2G2 1235 aaPredicted RBP4.09□□□□□ -1.75
NEB-204ENST00000409198 CC2D1BQ5T0F9 858 aaKnown RBP4.09□□□□□ -1.75
NEB-204ENST00000409198 SCLT1Q96NL6 688 aa4.09□□□□□ -1.75
NEB-204ENST00000409198 EPB41L2O43491 1005 aaKnown RBP4.09□□□□□ -1.75
NEB-204ENST00000409198 ZMYND15Q9H091 742 aa4.09□□□□□ -1.75
NEB-204ENST00000409198 SLU7O95391 586 aaKnown RBP4.09□□□□□ -1.75
NEB-204ENST00000409198 KRT18P05783 430 aaKnown RBP4.09□□□□□ -1.75
NEB-204ENST00000409198 UQCRHP07919 91 aa4.09□□□□□ -1.75
NEB-204ENST00000409198 NOC2LQ9Y3T9 749 aaKnown RBP4.09□□□□□ -1.75
NEB-204ENST00000409198 ZNHIT6Q9NWK9 470 aaKnown RBP4.09□□□□□ -1.75
NEB-204ENST00000409198 GNL3LQ9NVN8 582 aaKnown RBP4.09□□□□□ -1.76
NEB-204ENST00000409198 COMMD10Q9Y6G5 202 aa4.09□□□□□ -1.76
NEB-204ENST00000409198 U2AF1L5P0DN76 240 aaPredicted RBP4.09□□□□□ -1.76
NEB-204ENST00000409198 U2AF1Q01081 240 aaKnown RBP eCLIP4.09□□□□□ -1.76
NEB-204ENST00000409198 ITPRIPQ8IWB1 547 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 DDX23Q9BUQ8 820 aaKnown RBP4.08□□□□□ -1.76
NEB-204ENST00000409198 C9orf78Q9NZ63 289 aaPredicted RBP4.08□□□□□ -1.76
NEB-204ENST00000409198 ATP6V1DQ9Y5K8 247 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 CENPJQ9HC77 1338 aaPredicted RBP4.08□□□□□ -1.76
NEB-204ENST00000409198 KIF6Q6ZMV9 814 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 ERCC4Q92889 916 aaPredicted RBP4.08□□□□□ -1.76
NEB-204ENST00000409198 MAP7D2Q96T17 732 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 GOLGA6L3A6NEY3 463 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 BIRC2Q13490 618 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 ZSCAN29Q8IWY8 852 aaPredicted RBP4.08□□□□□ -1.76
NEB-204ENST00000409198 FERMT2Q96AC1 680 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 SMARCA2P51531 1590 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 STK11IPQ8N1F8 1099 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 PMFBP1Q8TBY8 1022 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 TRIM5Q9C035 493 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 POGZQ7Z3K3 1410 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 ST18O60284 1047 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 ANAPC15P60006 121 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 ATP2B2Q01814 1243 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 PDE3BQ13370 1112 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 PRPF31Q8WWY3 499 aaKnown RBP4.08□□□□□ -1.76
NEB-204ENST00000409198 LRRC45Q96CN5 670 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 G3BP1Q13283 466 aaKnown RBP eCLIP4.08□□□□□ -1.76
NEB-204ENST00000409198 CAGE1Q8TC20 777 aa4.08□□□□□ -1.76
NEB-204ENST00000409198 CLEC11AQ9Y240 323 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms