RNA–Protein interactions for RNA: ENST00000408973.2

LCNL1-201, Transcript of lipocalin like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LCNL1, Length 1,839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-201ENST00000408973 DISP3Q9P2K9 1392 aa33.7■■■□□ 2.99
LCNL1-201ENST00000408973 CCDC184Q52MB2 194 aa33.69■■■□□ 2.98
LCNL1-201ENST00000408973 KIF13AQ9H1H9 1805 aa33.69■■■□□ 2.98
LCNL1-201ENST00000408973 EIF3AQ14152 1382 aaKnown RBP33.69■■■□□ 2.98
LCNL1-201ENST00000408973 KTN1Q86UP2 1357 aaKnown RBP33.68■■■□□ 2.98
LCNL1-201ENST00000408973 PIK3C2BO00750 1634 aa33.68■■■□□ 2.98
LCNL1-201ENST00000408973 PPLO60437 1756 aa33.68■■■□□ 2.98
LCNL1-201ENST00000408973 CHGAP10645 457 aaKnown RBP33.67■■■□□ 2.98
LCNL1-201ENST00000408973 ADGRF5Q8IZF2 1346 aa33.66■■■□□ 2.98
LCNL1-201ENST00000408973 SYNMO15061 1565 aa33.65■■■□□ 2.98
LCNL1-201ENST00000408973 RPGRIP1LQ68CZ1 1315 aa33.65■■■□□ 2.98
LCNL1-201ENST00000408973 HNRNPUQ00839 825 aaKnown RBP eCLIP33.65■■■□□ 2.98
LCNL1-201ENST00000408973 AGLP35573 1532 aa33.62■■■□□ 2.97
LCNL1-201ENST00000408973 RALBP1Q15311 655 aa33.59■■■□□ 2.97
LCNL1-201ENST00000408973 CFAP70Q5T0N1 1121 aa33.59■■■□□ 2.97
LCNL1-201ENST00000408973 CDCA8Q53HL2 280 aa33.58■■■□□ 2.97
LCNL1-201ENST00000408973 SETBP1Q9Y6X0 1596 aa33.58■■■□□ 2.97
LCNL1-201ENST00000408973 FAM9BQ8IZU0 186 aa33.57■■■□□ 2.96
LCNL1-201ENST00000408973 PREX1Q8TCU6 1659 aa33.56■■■□□ 2.96
LCNL1-201ENST00000408973 SLC24A1O60721 1099 aa33.55■■■□□ 2.96
LCNL1-201ENST00000408973 CNGB1Q14028 1251 aaPredicted RBP33.55■■■□□ 2.96
LCNL1-201ENST00000408973 PIK3C2GO75747 1445 aa33.54■■■□□ 2.96
LCNL1-201ENST00000408973 PPP6R1Q9UPN7 881 aa33.53■■■□□ 2.96
LCNL1-201ENST00000408973 SLC52A1Q9NWF4 448 aa33.52■■■□□ 2.96
LCNL1-201ENST00000408973 MYBBP1AQ9BQG0 1328 aaKnown RBP33.51■■■□□ 2.96
LCNL1-201ENST00000408973 ARHGEF40Q8TER5 1519 aa33.5■■■□□ 2.95
LCNL1-201ENST00000408973 PER1O15534 1290 aaPredicted RBP33.49■■■□□ 2.95
LCNL1-201ENST00000408973 MYO3AQ8NEV4 1616 aa33.49■■■□□ 2.95
LCNL1-201ENST00000408973 NEXMIFQ5QGS0 1516 aa33.47■■■□□ 2.95
LCNL1-201ENST00000408973 BRD4O60885 1362 aaPredicted RBP33.47■■■□□ 2.95
LCNL1-201ENST00000408973 PANK3Q9H999 370 aa33.46■■■□□ 2.95
LCNL1-201ENST00000408973 PARD3Q8TEW0 1356 aa33.46■■■□□ 2.95
LCNL1-201ENST00000408973 C14orf93Q9H972 538 aaKnown RBP33.46■■■□□ 2.95
LCNL1-201ENST00000408973 KDM5AP29375 1690 aaKnown RBP33.46■■■□□ 2.95
LCNL1-201ENST00000408973 IDI1Q13907 227 aa33.44■■■□□ 2.94
LCNL1-201ENST00000408973 TMC1Q8TDI8 760 aa33.44■■■□□ 2.94
LCNL1-201ENST00000408973 VGFO15240 615 aaPredicted RBP33.44■■■□□ 2.94
LCNL1-201ENST00000408973 ERVK-7P63135 1459 aa33.41■■■□□ 2.94
LCNL1-201ENST00000408973 SUPT16HQ9Y5B9 1047 aaKnown RBP33.41■■■□□ 2.94
LCNL1-201ENST00000408973 CLTCQ00610 1675 aaKnown RBP33.4■■■□□ 2.94
LCNL1-201ENST00000408973 ZBED9Q6R2W3 1325 aa33.4■■■□□ 2.94
LCNL1-201ENST00000408973 ADGRB1O14514 1584 aa33.4■■■□□ 2.94
LCNL1-201ENST00000408973 SBNO2Q9Y2G9 1366 aa33.4■■■□□ 2.94
LCNL1-201ENST00000408973 TMEM131LA2VDJ0 1609 aa33.39■■■□□ 2.94
LCNL1-201ENST00000408973 ZFYVE9O95405 1425 aa33.39■■■□□ 2.94
LCNL1-201ENST00000408973 MYO5BQ9ULV0 1848 aa33.37■■■□□ 2.93
LCNL1-201ENST00000408973 MYOM1P52179 1685 aa33.36■■■□□ 2.93
LCNL1-201ENST00000408973 NLRP13Q86W25 1043 aa33.35■■■□□ 2.93
LCNL1-201ENST00000408973 PNISRQ8TF01 805 aaKnown RBP33.35■■■□□ 2.93
LCNL1-201ENST00000408973 CENPJQ9HC77 1338 aaPredicted RBP33.34■■■□□ 2.93
LCNL1-201ENST00000408973 NEFLP07196 543 aa33.31■■■□□ 2.92
LCNL1-201ENST00000408973 FBXO31Q5XUX0 539 aaPredicted RBP33.3■■■□□ 2.92
LCNL1-201ENST00000408973 QRICH2Q9H0J4 1663 aa33.3■■■□□ 2.92
LCNL1-201ENST00000408973 CC2D1BQ5T0F9 858 aaKnown RBP33.29■■■□□ 2.92
LCNL1-201ENST00000408973 KNSTRNQ9Y448 316 aa33.29■■■□□ 2.92
LCNL1-201ENST00000408973 SPATA31D1Q6ZQQ2 1576 aa33.29■■■□□ 2.92
LCNL1-201ENST00000408973 LRPPRCP42704 1394 aaKnown RBP33.28■■■□□ 2.92
LCNL1-201ENST00000408973 TRAK1Q9UPV9 953 aa33.28■■■□□ 2.92
LCNL1-201ENST00000408973 NUTM2DQ5VT03 806 aaPredicted RBP33.25■■■□□ 2.91
LCNL1-201ENST00000408973 ASXL1Q8IXJ9 1541 aa33.24■■■□□ 2.91
LCNL1-201ENST00000408973 MLECQ14165 292 aa33.23■■■□□ 2.91
LCNL1-201ENST00000408973 TMEM132EQ6IEE7 984 aa33.23■■■□□ 2.91
LCNL1-201ENST00000408973 ARHGEF28Q8N1W1 1705 aaKnown RBP33.21■■■□□ 2.91
LCNL1-201ENST00000408973 FKBP8Q14318 412 aa33.21■■■□□ 2.91
LCNL1-201ENST00000408973 NPC1L1Q9UHC9 1359 aa33.2■■■□□ 2.91
LCNL1-201ENST00000408973 STAG3Q9UJ98 1225 aa33.2■■■□□ 2.91
LCNL1-201ENST00000408973 ESF1Q9H501 851 aaKnown RBP33.19■■■□□ 2.9
LCNL1-201ENST00000408973 AMER1Q5JTC6 1135 aaPredicted RBP33.17■■■□□ 2.9
LCNL1-201ENST00000408973 A2ML1A8K2U0 1454 aa33.12■■■□□ 2.89
LCNL1-201ENST00000408973 INSRP06213 1382 aa33.1■■■□□ 2.89
LCNL1-201ENST00000408973 ZMYM3Q14202 1370 aa33.1■■■□□ 2.89
LCNL1-201ENST00000408973 PUS7Q96PZ0 661 aaKnown RBP33.09■■■□□ 2.89
LCNL1-201ENST00000408973 ALKQ9UM73 1620 aa33.06■■■□□ 2.88
LCNL1-201ENST00000408973 EVC2Q86UK5 1308 aa33.06■■■□□ 2.88
LCNL1-201ENST00000408973 SMG6Q86US8 1419 aaKnown RBP33.06■■■□□ 2.88
LCNL1-201ENST00000408973 PPP2R1AP30153 589 aa33.05■■■□□ 2.88
LCNL1-201ENST00000408973 RIMS2Q9UQ26 1411 aa33.04■■■□□ 2.88
LCNL1-201ENST00000408973 PELP1Q8IZL8 1130 aaKnown RBP33.03■■■□□ 2.88
LCNL1-201ENST00000408973 TULP4Q9NRJ4 1543 aa33.02■■■□□ 2.88
LCNL1-201ENST00000408973 YTHDC2Q9H6S0 1430 aaKnown RBP33.01■■■□□ 2.88
LCNL1-201ENST00000408973 CARD14Q9BXL6 1004 aa33■■■□□ 2.87
LCNL1-201ENST00000408973 PTPRMP28827 1452 aa32.99■■■□□ 2.87
LCNL1-201ENST00000408973 STK26Q9P289 416 aa32.98■■■□□ 2.87
LCNL1-201ENST00000408973 NUDCQ9Y266 331 aa32.98■■■□□ 2.87
LCNL1-201ENST00000408973 BLMP54132 1417 aaPredicted RBP32.97■■■□□ 2.87
LCNL1-201ENST00000408973 TNRQ92752 1358 aa32.97■■■□□ 2.87
LCNL1-201ENST00000408973 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.96■■■□□ 2.87
LCNL1-201ENST00000408973 BCANQ96GW7 911 aa32.95■■■□□ 2.87
LCNL1-201ENST00000408973 USP32Q8NFA0 1604 aa32.94■■■□□ 2.86
LCNL1-201ENST00000408973 NSD3Q9BZ95 1437 aa32.93■■■□□ 2.86
LCNL1-201ENST00000408973 SLC12A5Q9H2X9 1139 aa32.93■■■□□ 2.86
LCNL1-201ENST00000408973 SENP3Q9H4L4 574 aaPredicted RBP32.93■■■□□ 2.86
LCNL1-201ENST00000408973 SETD1AO15047 1707 aaKnown RBP32.91■■■□□ 2.86
LCNL1-201ENST00000408973 POGKQ9P215 609 aa32.9■■■□□ 2.86
LCNL1-201ENST00000408973 DLC1Q96QB1 1528 aa32.9■■■□□ 2.86
LCNL1-201ENST00000408973 NINLQ9Y2I6 1382 aa32.9■■■□□ 2.86
LCNL1-201ENST00000408973 HDGFP51858 240 aaKnown RBP32.89■■■□□ 2.86
LCNL1-201ENST00000408973 ERICH6BQ5W0A0 696 aa32.89■■■□□ 2.86
LCNL1-201ENST00000408973 SAFB2Q14151 953 aaKnown RBP eCLIP32.88■■■□□ 2.85
LCNL1-201ENST00000408973 WDR43Q15061 677 aaKnown RBP eCLIP32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms