RNA–Protein interactions for RNA: ENST00000407929.6

SLC8A1-208, Transcript of solute carrier family 8 member A1, humanhuman

TSL 5

Gene SLC8A1, Length 3,434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-208ENST00000407929 SENP3Q9H4L4 574 aaPredicted RBP11.9□□□□□ -0.5
SLC8A1-208ENST00000407929 LTKP29376 864 aa11.9□□□□□ -0.5
SLC8A1-208ENST00000407929 SPHKAPQ2M3C7 1700 aa11.89□□□□□ -0.51
SLC8A1-208ENST00000407929 TRPM2O94759 1503 aa11.89□□□□□ -0.51
SLC8A1-208ENST00000407929 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
SLC8A1-208ENST00000407929 ADGRB3O60242 1522 aa11.89□□□□□ -0.51
SLC8A1-208ENST00000407929 RIMS2Q9UQ26 1411 aa11.89□□□□□ -0.51
SLC8A1-208ENST00000407929 SCAF11Q99590 1463 aaKnown RBP11.88□□□□□ -0.51
SLC8A1-208ENST00000407929 RPGRIP1LQ68CZ1 1315 aa11.88□□□□□ -0.51
SLC8A1-208ENST00000407929 NPHP4O75161 1426 aaPredicted RBP11.88□□□□□ -0.51
SLC8A1-208ENST00000407929 UBR1Q8IWV7 1749 aa11.87□□□□□ -0.51
SLC8A1-208ENST00000407929 ANKRD30BQ9BXX2 1392 aa11.86□□□□□ -0.51
SLC8A1-208ENST00000407929 UBE2Q2Q8WVN8 375 aa11.86□□□□□ -0.51
SLC8A1-208ENST00000407929 SLC26A8Q96RN1 970 aa11.86□□□□□ -0.51
SLC8A1-208ENST00000407929 SLIT1O75093 1534 aa11.86□□□□□ -0.51
SLC8A1-208ENST00000407929 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
SLC8A1-208ENST00000407929 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
SLC8A1-208ENST00000407929 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
SLC8A1-208ENST00000407929 CLTCL1P53675 1640 aa11.84□□□□□ -0.51
SLC8A1-208ENST00000407929 TMEM131LA2VDJ0 1609 aa11.84□□□□□ -0.51
SLC8A1-208ENST00000407929 KIF1BO60333 1816 aa11.84□□□□□ -0.51
SLC8A1-208ENST00000407929 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
SLC8A1-208ENST00000407929 KDM2AQ9Y2K7 1162 aa11.83□□□□□ -0.52
SLC8A1-208ENST00000407929 STRCQ7RTU9 1775 aa11.82□□□□□ -0.52
SLC8A1-208ENST00000407929 PLEKHG1Q9ULL1 1385 aa11.82□□□□□ -0.52
SLC8A1-208ENST00000407929 MED14O60244 1454 aa11.82□□□□□ -0.52
SLC8A1-208ENST00000407929 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
SLC8A1-208ENST00000407929 DHX57Q6P158 1386 aaKnown RBP11.82□□□□□ -0.52
SLC8A1-208ENST00000407929 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
SLC8A1-208ENST00000407929 ZNF335Q9H4Z2 1342 aaPredicted RBP11.81□□□□□ -0.52
SLC8A1-208ENST00000407929 CCER1Q8TC90 406 aaPredicted RBP11.81□□□□□ -0.52
SLC8A1-208ENST00000407929 TBX22Q9Y458 520 aa11.81□□□□□ -0.52
SLC8A1-208ENST00000407929 ZFYVE9O95405 1425 aa11.81□□□□□ -0.52
SLC8A1-208ENST00000407929 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
SLC8A1-208ENST00000407929 POLR1AO95602 1720 aaPredicted RBP11.8□□□□□ -0.52
SLC8A1-208ENST00000407929 SIN3AQ96ST3 1273 aa11.8□□□□□ -0.52
SLC8A1-208ENST00000407929 MYO5BQ9ULV0 1848 aa11.79□□□□□ -0.52
SLC8A1-208ENST00000407929 SPATA31E1Q6ZUB1 1445 aa11.78□□□□□ -0.52
SLC8A1-208ENST00000407929 IQGAP1P46940 1657 aa11.78□□□□□ -0.52
SLC8A1-208ENST00000407929 KCNA6P17658 529 aa11.78□□□□□ -0.52
SLC8A1-208ENST00000407929 CERKQ8TCT0 537 aa11.78□□□□□ -0.52
SLC8A1-208ENST00000407929 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.52
SLC8A1-208ENST00000407929 NEURL4Q96JN8 1562 aa11.77□□□□□ -0.52
SLC8A1-208ENST00000407929 ADGRF5Q8IZF2 1346 aa11.76□□□□□ -0.53
SLC8A1-208ENST00000407929 C14orf37Q86TY3 774 aa11.76□□□□□ -0.53
SLC8A1-208ENST00000407929 ANO8Q9HCE9 1232 aaPredicted RBP11.76□□□□□ -0.53
SLC8A1-208ENST00000407929 TONSLQ96HA7 1378 aa11.75□□□□□ -0.53
SLC8A1-208ENST00000407929 AMOTL2Q9Y2J4 779 aa11.75□□□□□ -0.53
SLC8A1-208ENST00000407929 NEXMIFQ5QGS0 1516 aa11.75□□□□□ -0.53
SLC8A1-208ENST00000407929 NCBP3Q53F19 620 aaKnown RBP11.74□□□□□ -0.53
SLC8A1-208ENST00000407929 PIK3R4Q99570 1358 aa11.74□□□□□ -0.53
SLC8A1-208ENST00000407929 L3MBTL2Q969R5 705 aa11.73□□□□□ -0.53
SLC8A1-208ENST00000407929 CLSPNQ9HAW4 1339 aa11.73□□□□□ -0.53
SLC8A1-208ENST00000407929 ADAMTS13Q76LX8 1427 aa11.72□□□□□ -0.53
SLC8A1-208ENST00000407929 STK26Q9P289 416 aa11.72□□□□□ -0.53
SLC8A1-208ENST00000407929 CFAP70Q5T0N1 1121 aa11.72□□□□□ -0.53
SLC8A1-208ENST00000407929 CPS1P31327 1500 aa11.71□□□□□ -0.53
SLC8A1-208ENST00000407929 C14orf93Q9H972 538 aaKnown RBP11.71□□□□□ -0.53
SLC8A1-208ENST00000407929 DIP2AQ14689 1571 aa11.7□□□□□ -0.54
SLC8A1-208ENST00000407929 TMEM132EQ6IEE7 984 aa11.7□□□□□ -0.54
SLC8A1-208ENST00000407929 TOM1O60784 492 aa11.7□□□□□ -0.54
SLC8A1-208ENST00000407929 METP08581 1390 aa11.7□□□□□ -0.54
SLC8A1-208ENST00000407929 UBAP1LF5GYI3 381 aa11.69□□□□□ -0.54
SLC8A1-208ENST00000407929 SETBP1Q9Y6X0 1596 aa11.69□□□□□ -0.54
SLC8A1-208ENST00000407929 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
SLC8A1-208ENST00000407929 PPLO60437 1756 aa11.69□□□□□ -0.54
SLC8A1-208ENST00000407929 MYOM2P54296 1465 aa11.69□□□□□ -0.54
SLC8A1-208ENST00000407929 TMEM94Q12767 1356 aa11.68□□□□□ -0.54
SLC8A1-208ENST00000407929 PIK3C2GO75747 1445 aa11.67□□□□□ -0.54
SLC8A1-208ENST00000407929 POGKQ9P215 609 aa11.67□□□□□ -0.54
SLC8A1-208ENST00000407929 LTBP4Q8N2S1 1624 aa11.67□□□□□ -0.54
SLC8A1-208ENST00000407929 ALKQ9UM73 1620 aa11.67□□□□□ -0.54
SLC8A1-208ENST00000407929 MSH6P52701 1360 aa11.67□□□□□ -0.54
SLC8A1-208ENST00000407929 ATF3P18847 181 aa11.67□□□□□ -0.54
SLC8A1-208ENST00000407929 TIMELESSQ9UNS1 1208 aa11.67□□□□□ -0.54
SLC8A1-208ENST00000407929 NKTRP30414 1462 aaKnown RBP11.66□□□□□ -0.54
SLC8A1-208ENST00000407929 FBXO41Q8TF61 875 aa11.66□□□□□ -0.54
SLC8A1-208ENST00000407929 C19orf44Q9H6X5 657 aa11.66□□□□□ -0.54
SLC8A1-208ENST00000407929 TRAK1Q9UPV9 953 aa11.65□□□□□ -0.54
SLC8A1-208ENST00000407929 LRRC7Q96NW7 1537 aa11.65□□□□□ -0.55
SLC8A1-208ENST00000407929 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
SLC8A1-208ENST00000407929 PKNOX2Q96KN3 472 aa11.64□□□□□ -0.55
SLC8A1-208ENST00000407929 LRPPRCP42704 1394 aaKnown RBP11.64□□□□□ -0.55
SLC8A1-208ENST00000407929 PTPRUQ92729 1446 aa11.64□□□□□ -0.55
SLC8A1-208ENST00000407929 IQSEC2Q5JU85 1478 aa11.64□□□□□ -0.55
SLC8A1-208ENST00000407929 CADPS2Q86UW7 1296 aa11.64□□□□□ -0.55
SLC8A1-208ENST00000407929 ABCC11Q96J66 1382 aa11.63□□□□□ -0.55
SLC8A1-208ENST00000407929 NRXN1Q9ULB1 1477 aa11.63□□□□□ -0.55
SLC8A1-208ENST00000407929 YTHDC2Q9H6S0 1430 aaKnown RBP11.63□□□□□ -0.55
SLC8A1-208ENST00000407929 SAFB2Q14151 953 aaKnown RBP eCLIP11.63□□□□□ -0.55
SLC8A1-208ENST00000407929 IFT172Q9UG01 1749 aa11.63□□□□□ -0.55
SLC8A1-208ENST00000407929 NRXN3Q9Y4C0 1643 aa11.62□□□□□ -0.55
SLC8A1-208ENST00000407929 NCOA3Q9Y6Q9 1424 aa11.62□□□□□ -0.55
SLC8A1-208ENST00000407929 CHD2O14647 1828 aaKnown RBP11.62□□□□□ -0.55
SLC8A1-208ENST00000407929 WAPLQ7Z5K2 1190 aa11.62□□□□□ -0.55
SLC8A1-208ENST00000407929 PRAG1Q86YV5 1406 aa11.62□□□□□ -0.55
SLC8A1-208ENST00000407929 NBPF1Q3BBV0 1214 aa11.61□□□□□ -0.55
SLC8A1-208ENST00000407929 SIRT1Q96EB6 747 aa11.61□□□□□ -0.55
SLC8A1-208ENST00000407929 ROCK2O75116 1388 aaKnown RBP11.61□□□□□ -0.55
SLC8A1-208ENST00000407929 PRAM1Q96QH2 718 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms