RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 NLRP6P59044 892 aa6.24□□□□□ -1.41
HDAC9-204ENST00000406451 HFM1A2PYH4 1435 aa6.23□□□□□ -1.41
HDAC9-204ENST00000406451 ABTB2Q8N961 1025 aa6.23□□□□□ -1.41
HDAC9-204ENST00000406451 CLUAP1Q96AJ1 413 aa6.23□□□□□ -1.41
HDAC9-204ENST00000406451 NGEFQ8N5V2 710 aa6.23□□□□□ -1.41
HDAC9-204ENST00000406451 TRIM44Q96DX7 344 aaPredicted RBP6.23□□□□□ -1.41
HDAC9-204ENST00000406451 ARHGEF11O15085 1522 aa6.23□□□□□ -1.41
HDAC9-204ENST00000406451 GOLGA6L6A8MZA4 724 aa6.23□□□□□ -1.41
HDAC9-204ENST00000406451 EIF2S2P20042 333 aaKnown RBP6.22□□□□□ -1.41
HDAC9-204ENST00000406451 KLHL34Q8N239 644 aa6.22□□□□□ -1.41
HDAC9-204ENST00000406451 SMG6Q86US8 1419 aaKnown RBP6.22□□□□□ -1.41
HDAC9-204ENST00000406451 ADGRL1O94910 1474 aa6.22□□□□□ -1.41
HDAC9-204ENST00000406451 CCDC141Q6ZP82 1450 aa6.22□□□□□ -1.41
HDAC9-204ENST00000406451 DDX58O95786 925 aaKnown RBP6.22□□□□□ -1.41
HDAC9-204ENST00000406451 C9orf78Q9NZ63 289 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-204ENST00000406451 PCF11O94913 1555 aaKnown RBP6.22□□□□□ -1.41
HDAC9-204ENST00000406451 PRAM1Q96QH2 718 aa6.22□□□□□ -1.41
HDAC9-204ENST00000406451 USP35Q9P2H5 1018 aa6.21□□□□□ -1.41
HDAC9-204ENST00000406451 ELL2O00472 640 aaPredicted RBP6.21□□□□□ -1.41
HDAC9-204ENST00000406451 DCAF8L1A6NGE4 600 aa6.21□□□□□ -1.42
HDAC9-204ENST00000406451 DAPK1P53355 1430 aa6.21□□□□□ -1.42
HDAC9-204ENST00000406451 ERICH6BQ5W0A0 696 aa6.21□□□□□ -1.42
HDAC9-204ENST00000406451 NOL10Q9BSC4 688 aaKnown RBP6.21□□□□□ -1.42
HDAC9-204ENST00000406451 TOMM22Q9NS69 142 aa6.21□□□□□ -1.42
HDAC9-204ENST00000406451 BIVM-ERCC5R4GMW8 1640 aa6.21□□□□□ -1.42
HDAC9-204ENST00000406451 WASHC2AQ641Q2 1341 aa6.21□□□□□ -1.42
HDAC9-204ENST00000406451 E9PSI1 815 aa6.21□□□□□ -1.42
HDAC9-204ENST00000406451 PIP4K2BP78356 416 aa6.21□□□□□ -1.42
HDAC9-204ENST00000406451 CFAP70Q5T0N1 1121 aa6.21□□□□□ -1.42
HDAC9-204ENST00000406451 SF3B2Q13435 895 aaKnown RBP6.2□□□□□ -1.42
HDAC9-204ENST00000406451 STRN4Q9NRL3 753 aa6.2□□□□□ -1.42
HDAC9-204ENST00000406451 ERBINQ96RT1 1412 aa6.2□□□□□ -1.42
HDAC9-204ENST00000406451 ZNF608Q9ULD9 1512 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-204ENST00000406451 NRDCO43847 1150 aa6.2□□□□□ -1.42
HDAC9-204ENST00000406451 HSP90B1P14625 803 aaKnown RBP6.2□□□□□ -1.42
HDAC9-204ENST00000406451 RIPK4P57078 832 aa6.2□□□□□ -1.42
HDAC9-204ENST00000406451 PLB1Q6P1J6 1458 aa6.2□□□□□ -1.42
HDAC9-204ENST00000406451 NUTM2BA6NNL0 878 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-204ENST00000406451 NUTM2EB1AL46 878 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-204ENST00000406451 NUTM2AQ8IVF1 878 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-204ENST00000406451 VPS37DQ86XT2 251 aa6.2□□□□□ -1.42
HDAC9-204ENST00000406451 KIAA1107Q9UPP5 1409 aa6.2□□□□□ -1.42
HDAC9-204ENST00000406451 GGNBP2Q9H3C7 697 aa6.2□□□□□ -1.42
HDAC9-204ENST00000406451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.2□□□□□ -1.42
HDAC9-204ENST00000406451 PLCB2Q00722 1185 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 NECTIN2Q92692 538 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 LRRFIP1Q32MZ4 808 aaKnown RBP6.19□□□□□ -1.42
HDAC9-204ENST00000406451 KIF21AQ7Z4S6 1674 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 CAMSAP2Q08AD1 1489 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 HMOX1P09601 288 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 TRIM34Q9BYJ4 488 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 TSPYL4Q9UJ04 414 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 RPGRIP1LQ68CZ1 1315 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 PTPN23Q9H3S7 1636 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 SLC26A8Q96RN1 970 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 AKNAQ7Z591 1439 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 ZKSCAN2Q63HK3 967 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 ANKRD30BQ9BXX2 1392 aa6.19□□□□□ -1.42
HDAC9-204ENST00000406451 ROCK1Q13464 1354 aa6.18□□□□□ -1.42
HDAC9-204ENST00000406451 RUNDC1Q96C34 613 aa6.18□□□□□ -1.42
HDAC9-204ENST00000406451 APAF1O14727 1248 aa6.18□□□□□ -1.42
HDAC9-204ENST00000406451 AMOTL1Q8IY63 956 aa6.18□□□□□ -1.42
HDAC9-204ENST00000406451 HTATSF1O43719 755 aaKnown RBP6.18□□□□□ -1.42
HDAC9-204ENST00000406451 PRKRIP1Q9H875 184 aaPredicted RBP6.18□□□□□ -1.42
HDAC9-204ENST00000406451 FBXW7Q969H0 707 aa6.18□□□□□ -1.42
HDAC9-204ENST00000406451 RTEL1-TNFRSF6BF6WH68 1400 aa6.18□□□□□ -1.42
HDAC9-204ENST00000406451 CTTNBP2Q8WZ74 1663 aa6.18□□□□□ -1.42
HDAC9-204ENST00000406451 RBM33Q96EV2 1170 aaKnown RBP6.18□□□□□ -1.42
HDAC9-204ENST00000406451 CDK19Q9BWU1 502 aa6.18□□□□□ -1.42
HDAC9-204ENST00000406451 BCL2L13Q9BXK5 485 aa6.18□□□□□ -1.42
HDAC9-204ENST00000406451 DENND4BO75064 1496 aaPredicted RBP6.18□□□□□ -1.42
HDAC9-204ENST00000406451 GNAI1P63096 354 aa6.18□□□□□ -1.42
HDAC9-204ENST00000406451 FKBP5Q13451 457 aaPredicted RBP6.18□□□□□ -1.42
HDAC9-204ENST00000406451 FANCAO15360 1455 aa6.17□□□□□ -1.42
HDAC9-204ENST00000406451 TEX14Q8IWB6 1497 aa6.17□□□□□ -1.42
HDAC9-204ENST00000406451 PLEKHO1Q53GL0 409 aaPredicted RBP6.17□□□□□ -1.42
HDAC9-204ENST00000406451 SPRYD3Q8NCJ5 442 aa6.17□□□□□ -1.42
HDAC9-204ENST00000406451 PRDM11Q9NQV5 511 aa6.17□□□□□ -1.42
HDAC9-204ENST00000406451 TOM1L2Q6ZVM7 507 aa6.17□□□□□ -1.42
HDAC9-204ENST00000406451 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.17□□□□□ -1.42
HDAC9-204ENST00000406451 KIF7Q2M1P5 1343 aa6.17□□□□□ -1.42
HDAC9-204ENST00000406451 CCDC7Q96M83 1385 aa6.17□□□□□ -1.42
HDAC9-204ENST00000406451 TATP17735 454 aaPredicted RBP6.17□□□□□ -1.42
HDAC9-204ENST00000406451 API5Q9BZZ5 524 aaKnown RBP6.17□□□□□ -1.42
HDAC9-204ENST00000406451 FAM135AQ9P2D6 1515 aa6.17□□□□□ -1.42
HDAC9-204ENST00000406451 VPS53Q5VIR6 699 aa6.16□□□□□ -1.42
HDAC9-204ENST00000406451 GAS2L2Q8NHY3 880 aa6.16□□□□□ -1.42
HDAC9-204ENST00000406451 CCDC34Q96HJ3 373 aa6.16□□□□□ -1.42
HDAC9-204ENST00000406451 ZNF692Q9BU19 519 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-204ENST00000406451 MFAP1P55081 439 aaKnown RBP6.16□□□□□ -1.42
HDAC9-204ENST00000406451 ITSN2Q9NZM3 1697 aa6.16□□□□□ -1.42
HDAC9-204ENST00000406451 DNTTIP2Q5QJE6 756 aaKnown RBP6.16□□□□□ -1.42
HDAC9-204ENST00000406451 RIC3Q7Z5B4 369 aa6.16□□□□□ -1.42
HDAC9-204ENST00000406451 RAPGEF6Q8TEU7 1601 aa6.16□□□□□ -1.42
HDAC9-204ENST00000406451 RASSF8Q8NHQ8 419 aa6.15□□□□□ -1.42
HDAC9-204ENST00000406451 KIF3AQ9Y496 699 aa6.15□□□□□ -1.42
HDAC9-204ENST00000406451 CTDP1Q9Y5B0 961 aaPredicted RBP6.15□□□□□ -1.42
HDAC9-204ENST00000406451 DMRT2Q9Y5R5 561 aa6.15□□□□□ -1.42
HDAC9-204ENST00000406451 G3BP1Q13283 466 aaKnown RBP eCLIP6.15□□□□□ -1.42
HDAC9-204ENST00000406451 MAP3K1Q13233 1512 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms