RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 LTBP4Q8N2S1 1624 aa15.48■□□□□ 0.07
FAM49A-202ENST00000406434 HFM1A2PYH4 1435 aa15.48■□□□□ 0.07
FAM49A-202ENST00000406434 MED14O60244 1454 aa15.47■□□□□ 0.07
FAM49A-202ENST00000406434 SCAF11Q99590 1463 aaKnown RBP15.47■□□□□ 0.07
FAM49A-202ENST00000406434 ARHGAP23Q9P227 1491 aa15.45■□□□□ 0.06
FAM49A-202ENST00000406434 SLIT1O75093 1534 aa15.45■□□□□ 0.06
FAM49A-202ENST00000406434 IQGAP1P46940 1657 aa15.45■□□□□ 0.06
FAM49A-202ENST00000406434 PPP1R15AO75807 674 aaPredicted RBP15.45■□□□□ 0.06
FAM49A-202ENST00000406434 HDGFP51858 240 aaKnown RBP15.45■□□□□ 0.06
FAM49A-202ENST00000406434 NUTM2DQ5VT03 806 aaPredicted RBP15.44■□□□□ 0.06
FAM49A-202ENST00000406434 SLC26A8Q96RN1 970 aa15.43■□□□□ 0.06
FAM49A-202ENST00000406434 ADGRB3O60242 1522 aa15.43■□□□□ 0.06
FAM49A-202ENST00000406434 MYO5BQ9ULV0 1848 aa15.42■□□□□ 0.06
FAM49A-202ENST00000406434 KDM5AP29375 1690 aaKnown RBP15.42■□□□□ 0.06
FAM49A-202ENST00000406434 UBAP1LF5GYI3 381 aa15.41■□□□□ 0.06
FAM49A-202ENST00000406434 ZNF326Q5BKZ1 582 aaKnown RBP15.41■□□□□ 0.06
FAM49A-202ENST00000406434 RIMS2Q9UQ26 1411 aa15.41■□□□□ 0.06
FAM49A-202ENST00000406434 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.39■□□□□ 0.05
FAM49A-202ENST00000406434 TMEM131LA2VDJ0 1609 aa15.39■□□□□ 0.05
FAM49A-202ENST00000406434 SPHKAPQ2M3C7 1700 aa15.38■□□□□ 0.05
FAM49A-202ENST00000406434 MPHOSPH9Q99550 1183 aa15.37■□□□□ 0.05
FAM49A-202ENST00000406434 SETD5Q9C0A6 1442 aa15.37■□□□□ 0.05
FAM49A-202ENST00000406434 CPS1P31327 1500 aa15.37■□□□□ 0.05
FAM49A-202ENST00000406434 IQSEC2Q5JU85 1478 aa15.37■□□□□ 0.05
FAM49A-202ENST00000406434 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
FAM49A-202ENST00000406434 ZFYVE9O95405 1425 aa15.35■□□□□ 0.05
FAM49A-202ENST00000406434 PIP4K2BP78356 416 aa15.35■□□□□ 0.05
FAM49A-202ENST00000406434 STRCP1A6NGW2 1772 aa15.34■□□□□ 0.05
FAM49A-202ENST00000406434 TOM1O60784 492 aa15.34■□□□□ 0.05
FAM49A-202ENST00000406434 KCNA6P17658 529 aa15.34■□□□□ 0.05
FAM49A-202ENST00000406434 PLEKHG1Q9ULL1 1385 aa15.33■□□□□ 0.04
FAM49A-202ENST00000406434 PROSER2Q86WR7 435 aaPredicted RBP15.33■□□□□ 0.04
FAM49A-202ENST00000406434 RAB3GAP2Q9H2M9 1393 aa15.32■□□□□ 0.04
FAM49A-202ENST00000406434 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
FAM49A-202ENST00000406434 MYCNP04198 464 aaPredicted RBP15.32■□□□□ 0.04
FAM49A-202ENST00000406434 RBM33Q96EV2 1170 aaKnown RBP15.32■□□□□ 0.04
FAM49A-202ENST00000406434 CLTCL1P53675 1640 aa15.32■□□□□ 0.04
FAM49A-202ENST00000406434 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
FAM49A-202ENST00000406434 TRPM2O94759 1503 aa15.3■□□□□ 0.04
FAM49A-202ENST00000406434 LRRC7Q96NW7 1537 aa15.3■□□□□ 0.04
FAM49A-202ENST00000406434 KIF1BO60333 1816 aa15.3■□□□□ 0.04
FAM49A-202ENST00000406434 RGL3Q3MIN7 710 aa15.28■□□□□ 0.04
FAM49A-202ENST00000406434 VGFO15240 615 aaPredicted RBP15.25■□□□□ 0.03
FAM49A-202ENST00000406434 TMEM94Q12767 1356 aa15.25■□□□□ 0.03
FAM49A-202ENST00000406434 CCDC144AA2RUR9 1427 aa15.25■□□□□ 0.03
FAM49A-202ENST00000406434 ADAMTS13Q76LX8 1427 aa15.25■□□□□ 0.03
FAM49A-202ENST00000406434 C14orf37Q86TY3 774 aa15.24■□□□□ 0.03
FAM49A-202ENST00000406434 AMOTL2Q9Y2J4 779 aa15.24■□□□□ 0.03
FAM49A-202ENST00000406434 RPGRIP1LQ68CZ1 1315 aa15.23■□□□□ 0.03
FAM49A-202ENST00000406434 CHD2O14647 1828 aaKnown RBP15.23■□□□□ 0.03
FAM49A-202ENST00000406434 HRCP23327 699 aa15.22■□□□□ 0.03
FAM49A-202ENST00000406434 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.03
FAM49A-202ENST00000406434 NEXMIFQ5QGS0 1516 aa15.21■□□□□ 0.03
FAM49A-202ENST00000406434 HSPA1LP34931 641 aa15.21■□□□□ 0.02
FAM49A-202ENST00000406434 PIK3R4Q99570 1358 aa15.19■□□□□ 0.02
FAM49A-202ENST00000406434 DIP2AQ14689 1571 aa15.19■□□□□ 0.02
FAM49A-202ENST00000406434 METP08581 1390 aa15.18■□□□□ 0.02
FAM49A-202ENST00000406434 MSH6P52701 1360 aa15.18■□□□□ 0.02
FAM49A-202ENST00000406434 NKTRP30414 1462 aaKnown RBP15.18■□□□□ 0.02
FAM49A-202ENST00000406434 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
FAM49A-202ENST00000406434 NWD1Q149M9 1564 aa15.18■□□□□ 0.02
FAM49A-202ENST00000406434 PTPRUQ92729 1446 aa15.17■□□□□ 0.02
FAM49A-202ENST00000406434 SETBP1Q9Y6X0 1596 aa15.17■□□□□ 0.02
FAM49A-202ENST00000406434 ADGRF5Q8IZF2 1346 aa15.17■□□□□ 0.02
FAM49A-202ENST00000406434 ALKQ9UM73 1620 aa15.16■□□□□ 0.02
FAM49A-202ENST00000406434 NRXN3Q9Y4C0 1643 aa15.16■□□□□ 0.02
FAM49A-202ENST00000406434 SPATA31E1Q6ZUB1 1445 aa15.15■□□□□ 0.02
FAM49A-202ENST00000406434 PPLO60437 1756 aa15.15■□□□□ 0.02
FAM49A-202ENST00000406434 ATF3P18847 181 aa15.14■□□□□ 0.01
FAM49A-202ENST00000406434 C19orf44Q9H6X5 657 aa15.14■□□□□ 0.01
FAM49A-202ENST00000406434 SLAIN2Q9P270 581 aa15.14■□□□□ 0.01
FAM49A-202ENST00000406434 ANKRD30BQ9BXX2 1392 aa15.13■□□□□ 0.01
FAM49A-202ENST00000406434 KDM2AQ9Y2K7 1162 aa15.12■□□□□ 0.01
FAM49A-202ENST00000406434 CADPS2Q86UW7 1296 aa15.11■□□□□ 0.01
FAM49A-202ENST00000406434 STK26Q9P289 416 aa15.11■□□□□ 0.01
FAM49A-202ENST00000406434 NCOA3Q9Y6Q9 1424 aa15.11■□□□□ 0.01
FAM49A-202ENST00000406434 TMEM132EQ6IEE7 984 aa15.11■□□□□ 0.01
FAM49A-202ENST00000406434 DISP3Q9P2K9 1392 aa15.1■□□□□ 0.01
FAM49A-202ENST00000406434 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
FAM49A-202ENST00000406434 FAM135BQ49AJ0 1406 aa15.09■□□□□ 0.01
FAM49A-202ENST00000406434 DCAF11Q8TEB1 546 aa15.09■□□□□ 0.01
FAM49A-202ENST00000406434 XRN1Q8IZH2 1706 aaKnown RBP15.07■□□□□ 0
FAM49A-202ENST00000406434 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.07■□□□□ 0
FAM49A-202ENST00000406434 CFAP70Q5T0N1 1121 aa15.07■□□□□ 0
FAM49A-202ENST00000406434 TRIM26Q12899 539 aaPredicted RBP15.06■□□□□ 0
FAM49A-202ENST00000406434 IFT172Q9UG01 1749 aa15.06■□□□□ 0
FAM49A-202ENST00000406434 SETD1AO15047 1707 aaKnown RBP15.05■□□□□ -0
FAM49A-202ENST00000406434 C14orf93Q9H972 538 aaKnown RBP15.05■□□□□ -0
FAM49A-202ENST00000406434 ROBO1Q9Y6N7 1651 aa15.05■□□□□ -0
FAM49A-202ENST00000406434 ROBO2Q9HCK4 1378 aa15.05■□□□□ -0
FAM49A-202ENST00000406434 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
FAM49A-202ENST00000406434 PIK3C2GO75747 1445 aa15.03■□□□□ -0
FAM49A-202ENST00000406434 LRPPRCP42704 1394 aaKnown RBP15□□□□□ -0.01
FAM49A-202ENST00000406434 DHX57Q6P158 1386 aaKnown RBP15□□□□□ -0.01
FAM49A-202ENST00000406434 NEUROD1Q13562 356 aa15□□□□□ -0.01
FAM49A-202ENST00000406434 BRINP3Q76B58 766 aa15□□□□□ -0.01
FAM49A-202ENST00000406434 PTCH1Q13635 1447 aa15□□□□□ -0.01
FAM49A-202ENST00000406434 ADGRL3Q9HAR2 1447 aa15□□□□□ -0.01
FAM49A-202ENST00000406434 SIN3AQ96ST3 1273 aa14.99□□□□□ -0.01
FAM49A-202ENST00000406434 MYOM2P54296 1465 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms