RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ABCC1P33527 1531 aa22.13■■□□□ 1.13
PTPRA-205ENST00000399903 GGT6Q6P531 493 aa22.13■■□□□ 1.13
PTPRA-205ENST00000399903 DUOX2Q9NRD8 1548 aa22.13■■□□□ 1.13
PTPRA-205ENST00000399903 RALBP1Q15311 655 aa22.13■■□□□ 1.13
PTPRA-205ENST00000399903 NLRP13Q86W25 1043 aa22.11■■□□□ 1.13
PTPRA-205ENST00000399903 PDE3BQ13370 1112 aa22.11■■□□□ 1.13
PTPRA-205ENST00000399903 BRD4O60885 1362 aaPredicted RBP22.1■■□□□ 1.13
PTPRA-205ENST00000399903 C8orf34Q49A92 452 aa22.1■■□□□ 1.13
PTPRA-205ENST00000399903 ADGRL1O94910 1474 aa22.09■■□□□ 1.13
PTPRA-205ENST00000399903 DISP3Q9P2K9 1392 aa22.09■■□□□ 1.13
PTPRA-205ENST00000399903 RAPGEF3O95398 923 aa22.08■■□□□ 1.12
PTPRA-205ENST00000399903 CENPQQ7L2Z9 268 aaPredicted RBP22.07■■□□□ 1.12
PTPRA-205ENST00000399903 ERBINQ96RT1 1412 aa22.07■■□□□ 1.12
PTPRA-205ENST00000399903 MAST1Q9Y2H9 1570 aa22.07■■□□□ 1.12
PTPRA-205ENST00000399903 LRPPRCP42704 1394 aaKnown RBP22.06■■□□□ 1.12
PTPRA-205ENST00000399903 PANK3Q9H999 370 aa22.06■■□□□ 1.12
PTPRA-205ENST00000399903 KTN1Q86UP2 1357 aaKnown RBP22.06■■□□□ 1.12
PTPRA-205ENST00000399903 NUTM2DQ5VT03 806 aaPredicted RBP22.06■■□□□ 1.12
PTPRA-205ENST00000399903 TESK2Q96S53 571 aa22.05■■□□□ 1.12
PTPRA-205ENST00000399903 UNC13BO14795 1591 aa22.05■■□□□ 1.12
PTPRA-205ENST00000399903 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
PTPRA-205ENST00000399903 PNNQ9H307 717 aaKnown RBP22.04■■□□□ 1.12
PTPRA-205ENST00000399903 PLXNC1O60486 1568 aa22.04■■□□□ 1.12
PTPRA-205ENST00000399903 ZMYND15Q9H091 742 aa22.03■■□□□ 1.12
PTPRA-205ENST00000399903 HSP90AA2PQ14568 343 aaPredicted RBP22.01■■□□□ 1.11
PTPRA-205ENST00000399903 ZFYVE16Q7Z3T8 1539 aa22.01■■□□□ 1.11
PTPRA-205ENST00000399903 CFAP70Q5T0N1 1121 aa22.01■■□□□ 1.11
PTPRA-205ENST00000399903 IQGAP3Q86VI3 1631 aa22.01■■□□□ 1.11
PTPRA-205ENST00000399903 UGGT1Q9NYU2 1555 aa22■■□□□ 1.11
PTPRA-205ENST00000399903 KANK1Q14678 1352 aa21.98■■□□□ 1.11
PTPRA-205ENST00000399903 HSP90AA1P07900 732 aaKnown RBP21.98■■□□□ 1.11
PTPRA-205ENST00000399903 TMF1P82094 1093 aa21.98■■□□□ 1.11
PTPRA-205ENST00000399903 L1TD1Q5T7N2 865 aaKnown RBP21.97■■□□□ 1.11
PTPRA-205ENST00000399903 ATP10AO60312 1499 aa21.97■■□□□ 1.11
PTPRA-205ENST00000399903 ATP7AQ04656 1500 aa21.97■■□□□ 1.11
PTPRA-205ENST00000399903 BECN1Q14457 450 aa21.96■■□□□ 1.11
PTPRA-205ENST00000399903 PANK2Q9BZ23 570 aa21.96■■□□□ 1.11
PTPRA-205ENST00000399903 CFAP65Q6ZU64 1925 aaKnown RBP21.96■■□□□ 1.11
PTPRA-205ENST00000399903 KDM2BQ8NHM5 1336 aa21.96■■□□□ 1.11
PTPRA-205ENST00000399903 ADGRF5Q8IZF2 1346 aa21.95■■□□□ 1.11
PTPRA-205ENST00000399903 SEC24BO95487 1268 aa21.95■■□□□ 1.1
PTPRA-205ENST00000399903 ADAMTS8Q9UP79 889 aa21.95■■□□□ 1.1
PTPRA-205ENST00000399903 CD109Q6YHK3 1445 aa21.95■■□□□ 1.1
PTPRA-205ENST00000399903 TRPM1Q7Z4N2 1603 aa21.95■■□□□ 1.1
PTPRA-205ENST00000399903 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.95■■□□□ 1.1
PTPRA-205ENST00000399903 PER1O15534 1290 aaPredicted RBP21.94■■□□□ 1.1
PTPRA-205ENST00000399903 WDR43Q15061 677 aaKnown RBP eCLIP21.94■■□□□ 1.1
PTPRA-205ENST00000399903 CANXP27824 592 aaKnown RBP21.94■■□□□ 1.1
PTPRA-205ENST00000399903 POLR1AO95602 1720 aaPredicted RBP21.94■■□□□ 1.1
PTPRA-205ENST00000399903 E9PCH4 1651 aa21.93■■□□□ 1.1
PTPRA-205ENST00000399903 MAGI2Q86UL8 1455 aa21.92■■□□□ 1.1
PTPRA-205ENST00000399903 GOLGA6L3A6NEY3 463 aa21.92■■□□□ 1.1
PTPRA-205ENST00000399903 RTEL1-TNFRSF6BF6WH68 1400 aa21.92■■□□□ 1.1
PTPRA-205ENST00000399903 CCDC146Q8IYE0 955 aa21.91■■□□□ 1.1
PTPRA-205ENST00000399903 GPRASP1Q5JY77 1395 aa21.9■■□□□ 1.1
PTPRA-205ENST00000399903 TMEM132EQ6IEE7 984 aa21.88■■□□□ 1.09
PTPRA-205ENST00000399903 XRCC6P12956 609 aaKnown RBP eCLIP21.88■■□□□ 1.09
PTPRA-205ENST00000399903 BCAR3O75815 825 aa21.88■■□□□ 1.09
PTPRA-205ENST00000399903 ABCA9Q8IUA7 1624 aa21.86■■□□□ 1.09
PTPRA-205ENST00000399903 TRAK1Q9UPV9 953 aa21.86■■□□□ 1.09
PTPRA-205ENST00000399903 SLC24A1O60721 1099 aa21.85■■□□□ 1.09
PTPRA-205ENST00000399903 CLTCL1P53675 1640 aa21.85■■□□□ 1.09
PTPRA-205ENST00000399903 GOLGA2Q08379 1002 aa21.85■■□□□ 1.09
PTPRA-205ENST00000399903 IGHDP01880 384 aa21.85■■□□□ 1.09
PTPRA-205ENST00000399903 UPF2Q9HAU5 1272 aaKnown RBP21.85■■□□□ 1.09
PTPRA-205ENST00000399903 KNSTRNQ9Y448 316 aa21.84■■□□□ 1.09
PTPRA-205ENST00000399903 COL17A1Q9UMD9 1497 aaPredicted RBP21.84■■□□□ 1.09
PTPRA-205ENST00000399903 SAFB2Q14151 953 aaKnown RBP eCLIP21.83■■□□□ 1.09
PTPRA-205ENST00000399903 DUSP27Q5VZP5 1158 aa21.83■■□□□ 1.08
PTPRA-205ENST00000399903 PRDM15P57071 1507 aaPredicted RBP21.81■■□□□ 1.08
PTPRA-205ENST00000399903 COG6Q9Y2V7 657 aa21.81■■□□□ 1.08
PTPRA-205ENST00000399903 INO80Q9ULG1 1556 aaPredicted RBP21.8■■□□□ 1.08
PTPRA-205ENST00000399903 PTPRTO14522 1441 aa21.8■■□□□ 1.08
PTPRA-205ENST00000399903 TNNT2P45379 298 aaPredicted RBP21.79■■□□□ 1.08
PTPRA-205ENST00000399903 TRPM2O94759 1503 aa21.79■■□□□ 1.08
PTPRA-205ENST00000399903 ARAP3Q8WWN8 1544 aa21.79■■□□□ 1.08
PTPRA-205ENST00000399903 PARD3Q8TEW0 1356 aa21.79■■□□□ 1.08
PTPRA-205ENST00000399903 PANK1Q8TE04 598 aa21.78■■□□□ 1.08
PTPRA-205ENST00000399903 ZNF518AQ6AHZ1 1483 aa21.78■■□□□ 1.08
PTPRA-205ENST00000399903 KIDINS220Q9ULH0 1771 aa21.77■■□□□ 1.08
PTPRA-205ENST00000399903 USP19O94966 1318 aa21.77■■□□□ 1.08
PTPRA-205ENST00000399903 PLEKHH1Q9ULM0 1364 aa21.77■■□□□ 1.08
PTPRA-205ENST00000399903 NEUROD2Q15784 382 aa21.76■■□□□ 1.07
PTPRA-205ENST00000399903 NOS1P29475 1434 aa21.76■■□□□ 1.07
PTPRA-205ENST00000399903 TRIM44Q96DX7 344 aaPredicted RBP21.76■■□□□ 1.07
PTPRA-205ENST00000399903 SPHKAPQ2M3C7 1700 aa21.76■■□□□ 1.07
PTPRA-205ENST00000399903 FAM69CQ0P6D2 419 aa21.75■■□□□ 1.07
PTPRA-205ENST00000399903 MLECQ14165 292 aa21.75■■□□□ 1.07
PTPRA-205ENST00000399903 MYH16Q9H6N6 1097 aa21.75■■□□□ 1.07
PTPRA-205ENST00000399903 TBC1D2Q9BYX2 928 aa21.74■■□□□ 1.07
PTPRA-205ENST00000399903 POGZQ7Z3K3 1410 aa21.74■■□□□ 1.07
PTPRA-205ENST00000399903 APAF1O14727 1248 aa21.74■■□□□ 1.07
PTPRA-205ENST00000399903 SPINK5Q9NQ38 1064 aaPredicted RBP21.74■■□□□ 1.07
PTPRA-205ENST00000399903 MADDQ8WXG6 1647 aa21.74■■□□□ 1.07
PTPRA-205ENST00000399903 ARID3AQ99856 593 aa21.73■■□□□ 1.07
PTPRA-205ENST00000399903 MROH1Q8NDA8 1641 aa21.73■■□□□ 1.07
PTPRA-205ENST00000399903 STK26Q9P289 416 aa21.73■■□□□ 1.07
PTPRA-205ENST00000399903 RRP9O43818 475 aaKnown RBP21.73■■□□□ 1.07
PTPRA-205ENST00000399903 NPATQ14207 1427 aa21.72■■□□□ 1.07
PTPRA-205ENST00000399903 CLCN1P35523 988 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms