RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 RWDD1Q9H446 243 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-220ENST00000399655 DNAI2Q9GZS0 605 aa10.34□□□□□ -0.75
CACNA1C-220ENST00000399655 IFT57Q9NWB7 429 aa10.34□□□□□ -0.75
CACNA1C-220ENST00000399655 FAM184BQ9ULE4 1060 aa10.34□□□□□ -0.75
CACNA1C-220ENST00000399655 ZNHIT6Q9NWK9 470 aaKnown RBP10.33□□□□□ -0.75
CACNA1C-220ENST00000399655 MICALCLQ6ZW33 695 aa10.33□□□□□ -0.76
CACNA1C-220ENST00000399655 PIP4K2AP48426 406 aaPredicted RBP10.33□□□□□ -0.76
CACNA1C-220ENST00000399655 SMC6Q96SB8 1091 aa10.33□□□□□ -0.76
CACNA1C-220ENST00000399655 KIAA1328Q86T90 577 aa10.33□□□□□ -0.76
CACNA1C-220ENST00000399655 FAM161AQ3B820 660 aa10.32□□□□□ -0.76
CACNA1C-220ENST00000399655 NOL10Q9BSC4 688 aaKnown RBP10.32□□□□□ -0.76
CACNA1C-220ENST00000399655 GIGYF2Q6Y7W6 1299 aaKnown RBP10.32□□□□□ -0.76
CACNA1C-220ENST00000399655 EIF3AQ14152 1382 aaKnown RBP10.32□□□□□ -0.76
CACNA1C-220ENST00000399655 NOL3O60936 208 aaKnown RBP10.32□□□□□ -0.76
CACNA1C-220ENST00000399655 OLFM4Q6UX06 510 aa10.32□□□□□ -0.76
CACNA1C-220ENST00000399655 TIGD1Q96MW7 591 aa10.32□□□□□ -0.76
CACNA1C-220ENST00000399655 C6orf163Q5TEZ5 329 aa10.31□□□□□ -0.76
CACNA1C-220ENST00000399655 SLKQ9H2G2 1235 aaPredicted RBP10.31□□□□□ -0.76
CACNA1C-220ENST00000399655 KIF7Q2M1P5 1343 aa10.31□□□□□ -0.76
CACNA1C-220ENST00000399655 STK31Q9BXU1 1019 aa10.31□□□□□ -0.76
CACNA1C-220ENST00000399655 NAP1L3Q99457 506 aaPredicted RBP10.31□□□□□ -0.76
CACNA1C-220ENST00000399655 CCDC39Q9UFE4 941 aa10.31□□□□□ -0.76
CACNA1C-220ENST00000399655 LRRCC1Q9C099 1032 aa10.31□□□□□ -0.76
CACNA1C-220ENST00000399655 LOC105371045A0A1W2PR82 267 aa10.3□□□□□ -0.76
CACNA1C-220ENST00000399655 TRIM6-TRIM34B2RNG4 842 aa10.3□□□□□ -0.76
CACNA1C-220ENST00000399655 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
CACNA1C-220ENST00000399655 CENPHQ9H3R5 247 aa10.3□□□□□ -0.76
CACNA1C-220ENST00000399655 DNAJC2Q99543 621 aaKnown RBP10.3□□□□□ -0.76
CACNA1C-220ENST00000399655 MCM3P25205 808 aa10.3□□□□□ -0.76
CACNA1C-220ENST00000399655 CWC22Q9HCG8 908 aaKnown RBP10.3□□□□□ -0.76
CACNA1C-220ENST00000399655 OPA1O60313 960 aa10.3□□□□□ -0.76
CACNA1C-220ENST00000399655 NUCB2P80303 420 aa10.3□□□□□ -0.76
CACNA1C-220ENST00000399655 CPSF2Q9P2I0 782 aaKnown RBP10.3□□□□□ -0.76
CACNA1C-220ENST00000399655 PLPPR3Q6T4P5 718 aa10.29□□□□□ -0.76
CACNA1C-220ENST00000399655 DZIP1LQ8IYY4 767 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-220ENST00000399655 PRKCSHP14314 528 aaPredicted RBP10.29□□□□□ -0.76
CACNA1C-220ENST00000399655 PLEKHD1A6NEE1 506 aa10.29□□□□□ -0.76
CACNA1C-220ENST00000399655 SASS6Q6UVJ0 657 aa10.29□□□□□ -0.76
CACNA1C-220ENST00000399655 CGNL1Q0VF96 1302 aa10.29□□□□□ -0.76
CACNA1C-220ENST00000399655 U2SURPO15042 1029 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-220ENST00000399655 FERP16591 822 aa10.28□□□□□ -0.76
CACNA1C-220ENST00000399655 MYO10Q9HD67 2058 aa10.28□□□□□ -0.76
CACNA1C-220ENST00000399655 LMOD3Q0VAK6 560 aa10.28□□□□□ -0.76
CACNA1C-220ENST00000399655 FBLN2P98095 1184 aa10.28□□□□□ -0.76
CACNA1C-220ENST00000399655 TTLL5Q6EMB2 1281 aa10.28□□□□□ -0.76
CACNA1C-220ENST00000399655 BCL2L13Q9BXK5 485 aa10.28□□□□□ -0.76
CACNA1C-220ENST00000399655 TAX1BP1Q86VP1 789 aa10.28□□□□□ -0.76
CACNA1C-220ENST00000399655 CCDC174Q6PII3 467 aa10.28□□□□□ -0.76
CACNA1C-220ENST00000399655 MAP3K7CLP57077 242 aa10.28□□□□□ -0.76
CACNA1C-220ENST00000399655 DDX49Q9Y6V7 483 aaKnown RBP10.27□□□□□ -0.76
CACNA1C-220ENST00000399655 BRMS1Q9HCU9 246 aa10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 CFAP45Q9UL16 551 aa10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 TRIM35Q9UPQ4 493 aa10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 KIF20AO95235 890 aa10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 SEPT8Q92599 483 aa10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 SPAG9O60271 1321 aaKnown RBP10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 SAFBQ15424 915 aaKnown RBP eCLIP10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 STMN1P16949 149 aa10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 CENPQQ7L2Z9 268 aaPredicted RBP10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 PPP1R9BQ96SB3 815 aa10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 HOMER2Q9NSB8 354 aa10.27□□□□□ -0.77
CACNA1C-220ENST00000399655 PDCL2Q8N4E4 241 aa10.26□□□□□ -0.77
CACNA1C-220ENST00000399655 TSPY4P0CV99 314 aa10.26□□□□□ -0.77
CACNA1C-220ENST00000399655 TSPY10P0CW01 314 aa10.26□□□□□ -0.77
CACNA1C-220ENST00000399655 ZBTB17Q13105 803 aa10.26□□□□□ -0.77
CACNA1C-220ENST00000399655 GSE1Q14687 1217 aa10.26□□□□□ -0.77
CACNA1C-220ENST00000399655 MAP9Q49MG5 647 aa10.26□□□□□ -0.77
CACNA1C-220ENST00000399655 SREK1Q8WXA9 508 aaKnown RBP10.26□□□□□ -0.77
CACNA1C-220ENST00000399655 SMC4Q9NTJ3 1288 aa10.26□□□□□ -0.77
CACNA1C-220ENST00000399655 CALCOCO1Q9P1Z2 691 aa10.26□□□□□ -0.77
CACNA1C-220ENST00000399655 LETM1O95202 739 aaPredicted RBP10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 GOLGA6L9A6NEM1 432 aa10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 ZMAT2Q96NC0 199 aaKnown RBP10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 TOMM22Q9NS69 142 aa10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 RAB3IL1Q8TBN0 382 aa10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 FRAT2O75474 233 aaPredicted RBP10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 CCDC73Q6ZRK6 1079 aa10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 USH1CQ9Y6N9 552 aa10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 CCDC180Q9P1Z9 1646 aa10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 PPFIA2O75334 1257 aa10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 DZIP1Q86YF9 867 aaKnown RBP10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 GCOM1H8Y6P7 765 aaPredicted RBP10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 MYZAPP0CAP1 466 aa10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 MCTP1Q6DN14 999 aa10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 MAGEC2Q9UBF1 373 aaPredicted RBP10.25□□□□□ -0.77
CACNA1C-220ENST00000399655 NEBLO76041 1014 aa10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 CCDC27Q2M243 656 aa10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 CCDC181Q5TID7 509 aa10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 TICAM2Q86XR7 235 aa10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 FEZ2Q9UHY8 353 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 FILIP1LQ4L180 1135 aa10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 MKRN1Q9UHC7 482 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 RNF168Q8IYW5 571 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 ZFYP08048 801 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 JAKMIP3Q5VZ66 844 aa10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 SLU7O95391 586 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 SPECC1LQ69YQ0 1117 aa10.24□□□□□ -0.77
CACNA1C-220ENST00000399655 ANAPC15P60006 121 aa10.23□□□□□ -0.77
CACNA1C-220ENST00000399655 CETN2P41208 172 aa10.23□□□□□ -0.77
CACNA1C-220ENST00000399655 CPLX1O14810 134 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms