RNA–Protein interactions for RNA: ENST00000399609.7

SRL-201, Transcript of sarcalumenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRL, Length 4,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRL-201ENST00000399609 USP21Q9UK80 565 aa11.15□□□□□ -0.62
SRL-201ENST00000399609 KIF14Q15058 1648 aa11.15□□□□□ -0.62
SRL-201ENST00000399609 NEO1Q92859 1461 aa11.15□□□□□ -0.63
SRL-201ENST00000399609 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
SRL-201ENST00000399609 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
SRL-201ENST00000399609 SETD5Q9C0A6 1442 aa11.14□□□□□ -0.63
SRL-201ENST00000399609 QTRT2Q9H974 415 aaKnown RBP11.14□□□□□ -0.63
SRL-201ENST00000399609 WAPLQ7Z5K2 1190 aa11.13□□□□□ -0.63
SRL-201ENST00000399609 CENPJQ9HC77 1338 aaPredicted RBP11.13□□□□□ -0.63
SRL-201ENST00000399609 CC2D1BQ5T0F9 858 aaKnown RBP11.13□□□□□ -0.63
SRL-201ENST00000399609 TTC5Q8N0Z6 440 aa11.13□□□□□ -0.63
SRL-201ENST00000399609 PNNQ9H307 717 aaKnown RBP11.12□□□□□ -0.63
SRL-201ENST00000399609 FGD6Q6ZV73 1430 aa11.12□□□□□ -0.63
SRL-201ENST00000399609 TEFQ10587 303 aa11.12□□□□□ -0.63
SRL-201ENST00000399609 CABP2Q9NPB3 220 aa11.12□□□□□ -0.63
SRL-201ENST00000399609 TRAPPC8Q9Y2L5 1435 aa11.12□□□□□ -0.63
SRL-201ENST00000399609 RBM42Q9BTD8 480 aaKnown RBP11.11□□□□□ -0.63
SRL-201ENST00000399609 WASHC2AQ641Q2 1341 aa11.11□□□□□ -0.63
SRL-201ENST00000399609 RPGRIP1LQ68CZ1 1315 aa11.11□□□□□ -0.63
SRL-201ENST00000399609 EXOC5O00471 708 aa11.11□□□□□ -0.63
SRL-201ENST00000399609 HSPA1LP34931 641 aa11.11□□□□□ -0.63
SRL-201ENST00000399609 STAC3Q96MF2 364 aa11.11□□□□□ -0.63
SRL-201ENST00000399609 WDR97A6NE52 1622 aa11.1□□□□□ -0.63
SRL-201ENST00000399609 YEATS2Q9ULM3 1422 aa11.09□□□□□ -0.63
SRL-201ENST00000399609 PDE4CQ08493 712 aa11.09□□□□□ -0.63
SRL-201ENST00000399609 KIF21BO75037 1637 aa11.09□□□□□ -0.63
SRL-201ENST00000399609 TARBP1Q13395 1621 aaKnown RBP11.09□□□□□ -0.63
SRL-201ENST00000399609 TATP17735 454 aaPredicted RBP11.09□□□□□ -0.63
SRL-201ENST00000399609 POLD1P28340 1107 aa11.09□□□□□ -0.63
SRL-201ENST00000399609 CHRNA2Q15822 529 aa11.09□□□□□ -0.63
SRL-201ENST00000399609 CCDC136Q96JN2 1154 aa11.09□□□□□ -0.63
SRL-201ENST00000399609 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
SRL-201ENST00000399609 GLIPR1L2Q4G1C9 344 aa11.08□□□□□ -0.64
SRL-201ENST00000399609 ZFYVE16Q7Z3T8 1539 aa11.08□□□□□ -0.64
SRL-201ENST00000399609 TRPC5Q9UL62 973 aaPredicted RBP11.08□□□□□ -0.64
SRL-201ENST00000399609 DDX10Q13206 875 aaKnown RBP11.08□□□□□ -0.64
SRL-201ENST00000399609 UGGT2Q9NYU1 1516 aa11.08□□□□□ -0.64
SRL-201ENST00000399609 L3MBTL2Q969R5 705 aa11.08□□□□□ -0.64
SRL-201ENST00000399609 CDK19Q9BWU1 502 aa11.08□□□□□ -0.64
SRL-201ENST00000399609 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
SRL-201ENST00000399609 TBX22Q9Y458 520 aa11.08□□□□□ -0.64
SRL-201ENST00000399609 MIA2Q96PC5 1412 aa11.07□□□□□ -0.64
SRL-201ENST00000399609 U2AF1L5P0DN76 240 aaPredicted RBP11.07□□□□□ -0.64
SRL-201ENST00000399609 U2AF1Q01081 240 aaKnown RBP eCLIP11.07□□□□□ -0.64
SRL-201ENST00000399609 CCDC61Q9Y6R9 512 aa11.07□□□□□ -0.64
SRL-201ENST00000399609 CABLES1Q8TDN4 633 aa11.07□□□□□ -0.64
SRL-201ENST00000399609 ERBINQ96RT1 1412 aa11.06□□□□□ -0.64
SRL-201ENST00000399609 PAXIP1Q6ZW49 1069 aaPredicted RBP11.06□□□□□ -0.64
SRL-201ENST00000399609 RTEL1-TNFRSF6BF6WH68 1400 aa11.06□□□□□ -0.64
SRL-201ENST00000399609 NUP153P49790 1475 aaKnown RBP11.05□□□□□ -0.64
SRL-201ENST00000399609 ERCC6L2Q5T890 1561 aa11.05□□□□□ -0.64
SRL-201ENST00000399609 KIAA0556O60303 1618 aa11.05□□□□□ -0.64
SRL-201ENST00000399609 LRRC9Q6ZRR7 1453 aa11.05□□□□□ -0.64
SRL-201ENST00000399609 C16orf71Q8IYS4 520 aaPredicted RBP11.05□□□□□ -0.64
SRL-201ENST00000399609 NGEFQ8N5V2 710 aa11.05□□□□□ -0.64
SRL-201ENST00000399609 NUDT16Q96DE0 195 aaKnown RBP11.05□□□□□ -0.64
SRL-201ENST00000399609 TMEM94Q12767 1356 aa11.04□□□□□ -0.64
SRL-201ENST00000399609 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
SRL-201ENST00000399609 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
SRL-201ENST00000399609 EHBP1L1Q8N3D4 1523 aa11.04□□□□□ -0.64
SRL-201ENST00000399609 RRBP1Q9P2E9 1410 aaKnown RBP11.04□□□□□ -0.64
SRL-201ENST00000399609 FAM9BQ8IZU0 186 aa11.04□□□□□ -0.64
SRL-201ENST00000399609 KCNH5Q8NCM2 988 aa11.04□□□□□ -0.64
SRL-201ENST00000399609 KAT6BQ8WYB5 2073 aa11.04□□□□□ -0.64
SRL-201ENST00000399609 STK32BQ9NY57 414 aa11.04□□□□□ -0.64
SRL-201ENST00000399609 KDM5BQ9UGL1 1544 aa11.04□□□□□ -0.64
SRL-201ENST00000399609 GPR162Q16538 588 aa11.03□□□□□ -0.64
SRL-201ENST00000399609 ERICH6BQ5W0A0 696 aa11.03□□□□□ -0.64
SRL-201ENST00000399609 RAPGEF6Q8TEU7 1601 aa11.03□□□□□ -0.64
SRL-201ENST00000399609 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
SRL-201ENST00000399609 CABP1Q9NZU7 370 aa11.03□□□□□ -0.64
SRL-201ENST00000399609 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
SRL-201ENST00000399609 BIVM-ERCC5R4GMW8 1640 aa11.03□□□□□ -0.64
SRL-201ENST00000399609 APBA3O96018 575 aa11.02□□□□□ -0.64
SRL-201ENST00000399609 DDB1Q16531 1140 aa11.02□□□□□ -0.64
SRL-201ENST00000399609 DISP1Q96F81 1524 aa11.02□□□□□ -0.65
SRL-201ENST00000399609 FAM98CQ17RN3 349 aaKnown RBP11.02□□□□□ -0.65
SRL-201ENST00000399609 CHMP4AQ9BY43 222 aa11.01□□□□□ -0.65
SRL-201ENST00000399609 BTG4Q9NY30 223 aa11.01□□□□□ -0.65
SRL-201ENST00000399609 WWC3Q9ULE0 1092 aa11.01□□□□□ -0.65
SRL-201ENST00000399609 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
SRL-201ENST00000399609 TAF7LQ5H9L4 462 aa11.01□□□□□ -0.65
SRL-201ENST00000399609 CFAP44Q96MT7 982 aa11.01□□□□□ -0.65
SRL-201ENST00000399609 RIMS2Q9UQ26 1411 aa11.01□□□□□ -0.65
SRL-201ENST00000399609 TIMELESSQ9UNS1 1208 aa11□□□□□ -0.65
SRL-201ENST00000399609 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
SRL-201ENST00000399609 NPHP4O75161 1426 aaPredicted RBP10.99□□□□□ -0.65
SRL-201ENST00000399609 CGNL1Q0VF96 1302 aa10.99□□□□□ -0.65
SRL-201ENST00000399609 ORAI2Q96SN7 254 aa10.99□□□□□ -0.65
SRL-201ENST00000399609 ABCA5Q8WWZ7 1642 aa10.99□□□□□ -0.65
SRL-201ENST00000399609 FAM177BA6PVY3 158 aa10.99□□□□□ -0.65
SRL-201ENST00000399609 DDX17Q92841 729 aaKnown RBP10.99□□□□□ -0.65
SRL-201ENST00000399609 TFCP2L1Q9NZI6 479 aa10.99□□□□□ -0.65
SRL-201ENST00000399609 CHMP3Q9Y3E7 222 aa10.99□□□□□ -0.65
SRL-201ENST00000399609 MAGI2Q86UL8 1455 aa10.98□□□□□ -0.65
SRL-201ENST00000399609 CAMSAP2Q08AD1 1489 aa10.98□□□□□ -0.65
SRL-201ENST00000399609 LTKP29376 864 aa10.98□□□□□ -0.65
SRL-201ENST00000399609 AK7Q96M32 723 aa10.98□□□□□ -0.65
SRL-201ENST00000399609 MRS2Q9HD23 443 aa10.98□□□□□ -0.65
SRL-201ENST00000399609 ST20-MTHFSA0A0A6YYL1 179 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms