RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
ITSN1-207ENST00000399338 GTF2F1P35269 517 aaKnown RBP eCLIP13.85□□□□□ -0.19
ITSN1-207ENST00000399338 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.85□□□□□ -0.19
ITSN1-207ENST00000399338 MPHOSPH9Q99550 1183 aa13.85□□□□□ -0.19
ITSN1-207ENST00000399338 ANKRD30BQ9BXX2 1392 aa13.84□□□□□ -0.19
ITSN1-207ENST00000399338 KDM6BO15054 1643 aa13.84□□□□□ -0.19
ITSN1-207ENST00000399338 PARD3Q8TEW0 1356 aa13.84□□□□□ -0.19
ITSN1-207ENST00000399338 FYCO1Q9BQS8 1478 aa13.83□□□□□ -0.2
ITSN1-207ENST00000399338 GBP4Q96PP9 640 aa13.83□□□□□ -0.2
ITSN1-207ENST00000399338 DUSP27Q5VZP5 1158 aa13.83□□□□□ -0.2
ITSN1-207ENST00000399338 JARID2Q92833 1246 aaPredicted RBP13.82□□□□□ -0.2
ITSN1-207ENST00000399338 DNAJC2Q99543 621 aaKnown RBP13.82□□□□□ -0.2
ITSN1-207ENST00000399338 HSP90AB1P08238 724 aaKnown RBP13.81□□□□□ -0.2
ITSN1-207ENST00000399338 RBM25P49756 843 aaKnown RBP13.81□□□□□ -0.2
ITSN1-207ENST00000399338 RAB3GAP1Q15042 981 aa13.81□□□□□ -0.2
ITSN1-207ENST00000399338 MBD5Q9P267 1494 aa13.81□□□□□ -0.2
ITSN1-207ENST00000399338 DHX37Q8IY37 1157 aaKnown RBP13.81□□□□□ -0.2
ITSN1-207ENST00000399338 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
ITSN1-207ENST00000399338 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
ITSN1-207ENST00000399338 IGF1RP08069 1367 aa13.81□□□□□ -0.2
ITSN1-207ENST00000399338 NBPF1Q3BBV0 1214 aa13.8□□□□□ -0.2
ITSN1-207ENST00000399338 ZNF445P59923 1031 aa13.8□□□□□ -0.2
ITSN1-207ENST00000399338 PRIMPOLQ96LW4 560 aa13.79□□□□□ -0.2
ITSN1-207ENST00000399338 TSC1Q92574 1164 aa13.79□□□□□ -0.2
ITSN1-207ENST00000399338 IGSF3O75054 1194 aa13.78□□□□□ -0.2
ITSN1-207ENST00000399338 HMGN5P82970 282 aaKnown RBP13.78□□□□□ -0.2
ITSN1-207ENST00000399338 E9PSI1 815 aa13.78□□□□□ -0.2
ITSN1-207ENST00000399338 KCNJ4P48050 445 aa13.78□□□□□ -0.2
ITSN1-207ENST00000399338 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
ITSN1-207ENST00000399338 SMC5Q8IY18 1101 aa13.78□□□□□ -0.2
ITSN1-207ENST00000399338 CHMP4AQ9BY43 222 aa13.78□□□□□ -0.2
ITSN1-207ENST00000399338 ARHGAP31Q2M1Z3 1444 aa13.78□□□□□ -0.2
ITSN1-207ENST00000399338 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
ITSN1-207ENST00000399338 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.2
ITSN1-207ENST00000399338 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.2
ITSN1-207ENST00000399338 KIF21AQ7Z4S6 1674 aa13.77□□□□□ -0.2
ITSN1-207ENST00000399338 HSCBQ8IWL3 235 aa13.77□□□□□ -0.21
ITSN1-207ENST00000399338 C22orf23Q9BZE7 217 aa13.77□□□□□ -0.21
ITSN1-207ENST00000399338 KIF14Q15058 1648 aa13.77□□□□□ -0.21
ITSN1-207ENST00000399338 ZNF771Q7L3S4 317 aaPredicted RBP13.77□□□□□ -0.21
ITSN1-207ENST00000399338 CCDC39Q9UFE4 941 aa13.77□□□□□ -0.21
ITSN1-207ENST00000399338 RRP7BPQ9NSQ0 103 aa13.76□□□□□ -0.21
ITSN1-207ENST00000399338 RBSNQ9H1K0 784 aa13.76□□□□□ -0.21
ITSN1-207ENST00000399338 ZNF608Q9ULD9 1512 aaPredicted RBP13.75□□□□□ -0.21
ITSN1-207ENST00000399338 MMP14P50281 582 aa13.75□□□□□ -0.21
ITSN1-207ENST00000399338 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
ITSN1-207ENST00000399338 ZNF521Q96K83 1311 aa13.75□□□□□ -0.21
ITSN1-207ENST00000399338 EFCAB5A4FU69 1503 aa13.75□□□□□ -0.21
ITSN1-207ENST00000399338 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
ITSN1-207ENST00000399338 TULP2O00295 520 aa13.74□□□□□ -0.21
ITSN1-207ENST00000399338 PLEKHH1Q9ULM0 1364 aa13.74□□□□□ -0.21
ITSN1-207ENST00000399338 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
ITSN1-207ENST00000399338 PDCL2Q8N4E4 241 aa13.73□□□□□ -0.21
ITSN1-207ENST00000399338 SNX21Q969T3 373 aa13.73□□□□□ -0.21
ITSN1-207ENST00000399338 NINLQ9Y2I6 1382 aa13.73□□□□□ -0.21
ITSN1-207ENST00000399338 GABPB1Q06547 395 aaPredicted RBP13.73□□□□□ -0.21
ITSN1-207ENST00000399338 CERS3Q8IU89 383 aa13.73□□□□□ -0.21
ITSN1-207ENST00000399338 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
ITSN1-207ENST00000399338 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
ITSN1-207ENST00000399338 ATP1B4Q9UN42 357 aaPredicted RBP13.73□□□□□ -0.21
ITSN1-207ENST00000399338 KIF3AQ9Y496 699 aa13.73□□□□□ -0.21
ITSN1-207ENST00000399338 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
ITSN1-207ENST00000399338 CGNL1Q0VF96 1302 aa13.72□□□□□ -0.21
ITSN1-207ENST00000399338 KIAA2012Q0VF49 1180 aa13.72□□□□□ -0.21
ITSN1-207ENST00000399338 CLUAP1Q96AJ1 413 aa13.72□□□□□ -0.21
ITSN1-207ENST00000399338 FEZ1Q99689 392 aa13.72□□□□□ -0.21
ITSN1-207ENST00000399338 CAPN2P17655 700 aa13.71□□□□□ -0.21
ITSN1-207ENST00000399338 DDX49Q9Y6V7 483 aaKnown RBP13.71□□□□□ -0.21
ITSN1-207ENST00000399338 SLFN14P0C7P3 912 aa13.71□□□□□ -0.21
ITSN1-207ENST00000399338 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■■■□□ 14.6
ITSN1-207ENST00000399338 ANKRD7Q92527 254 aa13.71□□□□□ -0.21
ITSN1-207ENST00000399338 ZSCAN23Q3MJ62 389 aa13.7□□□□□ -0.22
ITSN1-207ENST00000399338 CC2D2AQ9P2K1 1620 aa13.7□□□□□ -0.22
ITSN1-207ENST00000399338 CCDC66A2RUB6 948 aa13.7□□□□□ -0.22
ITSN1-207ENST00000399338 TRMT2AQ8IZ69 625 aaKnown RBP13.7□□□□□ -0.22
ITSN1-207ENST00000399338 TIGD1Q96MW7 591 aa13.7□□□□□ -0.22
ITSN1-207ENST00000399338 OGFRQ9NZT2 677 aa13.7□□□□□ -0.22
ITSN1-207ENST00000399338 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
ITSN1-207ENST00000399338 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
ITSN1-207ENST00000399338 SLFN5Q08AF3 891 aa13.69□□□□□ -0.22
ITSN1-207ENST00000399338 FAM177BA6PVY3 158 aa13.68□□□□□ -0.22
ITSN1-207ENST00000399338 GOLGA6L22H0YM25 854 aa13.68□□□□□ -0.22
ITSN1-207ENST00000399338 CUL7Q14999 1698 aa13.68□□□□□ -0.22
ITSN1-207ENST00000399338 PRIM1P49642 420 aaKnown RBP13.68□□□□□ -0.22
ITSN1-207ENST00000399338 PSEN1P49768 467 aa13.68□□□□□ -0.22
ITSN1-207ENST00000399338 PDE3AQ14432 1141 aa13.68□□□□□ -0.22
ITSN1-207ENST00000399338 CLASP1Q7Z460 1538 aa13.68□□□□□ -0.22
ITSN1-207ENST00000399338 TCOF1Q13428 1488 aaKnown RBP13.68□□□□□ -0.22
ITSN1-207ENST00000399338 BCAR3O75815 825 aa13.68□□□□□ -0.22
ITSN1-207ENST00000399338 MFAP1P55081 439 aaKnown RBP13.68□□□□□ -0.22
ITSN1-207ENST00000399338 YY1AP1Q9H869 796 aa13.68□□□□□ -0.22
ITSN1-207ENST00000399338 PDZRN3Q9UPQ7 1066 aa13.68□□□□□ -0.22
ITSN1-207ENST00000399338 PER1O15534 1290 aaPredicted RBP13.67□□□□□ -0.22
ITSN1-207ENST00000399338 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.67□□□□□ -0.22
ITSN1-207ENST00000399338 EPRSP07814 1512 aaKnown RBP13.67□□□□□ -0.22
ITSN1-207ENST00000399338 FHOD3Q2V2M9 1422 aa13.67□□□□□ -0.22
ITSN1-207ENST00000399338 RALGAPBQ86X10 1494 aa13.67□□□□□ -0.22
ITSN1-207ENST00000399338 MTUS2Q5JR59 1369 aa13.67□□□□□ -0.22
ITSN1-207ENST00000399338 SOX12O15370 315 aa13.66□□□□□ -0.22
ITSN1-207ENST00000399338 SLC52A1Q9NWF4 448 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms