RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 ZNF772Q68DY9 489 aaPredicted RBP22■■□□□ 1.11
FAM3B-204ENST00000398652 IDI1Q13907 227 aa21.99■■□□□ 1.11
FAM3B-204ENST00000398652 LMTK2Q8IWU2 1503 aa21.99■■□□□ 1.11
FAM3B-204ENST00000398652 TRIM52Q96A61 297 aa21.98■■□□□ 1.11
FAM3B-204ENST00000398652 KANK1Q14678 1352 aa21.98■■□□□ 1.11
FAM3B-204ENST00000398652 MEX3CQ5U5Q3 659 aaKnown RBP21.97■■□□□ 1.11
FAM3B-204ENST00000398652 AHDC1Q5TGY3 1603 aaPredicted RBP21.96■■□□□ 1.11
FAM3B-204ENST00000398652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.96■■□□□ 1.111e-6■■■□□ 17.9
FAM3B-204ENST00000398652 MYO5BQ9ULV0 1848 aa21.95■■□□□ 1.1
FAM3B-204ENST00000398652 KCNA4P22459 653 aa21.95■■□□□ 1.1
FAM3B-204ENST00000398652 NOS1P29475 1434 aa21.94■■□□□ 1.1
FAM3B-204ENST00000398652 CDK12Q9NYV4 1490 aaPredicted RBP21.94■■□□□ 1.1
FAM3B-204ENST00000398652 BCANQ96GW7 911 aa21.92■■□□□ 1.1
FAM3B-204ENST00000398652 NCOA3Q9Y6Q9 1424 aa21.91■■□□□ 1.1
FAM3B-204ENST00000398652 RRP7BPQ9NSQ0 103 aa21.91■■□□□ 1.1
FAM3B-204ENST00000398652 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.91■■□□□ 1.1
FAM3B-204ENST00000398652 ABCC5O15440 1437 aa21.9■■□□□ 1.1
FAM3B-204ENST00000398652 RXRBP28702 533 aa21.9■■□□□ 1.1
FAM3B-204ENST00000398652 PLEKHG1Q9ULL1 1385 aa21.89■■□□□ 1.1
FAM3B-204ENST00000398652 ZFYVE9O95405 1425 aa21.89■■□□□ 1.09
FAM3B-204ENST00000398652 GCC2Q8IWJ2 1684 aa21.88■■□□□ 1.09
FAM3B-204ENST00000398652 DIP2AQ14689 1571 aa21.88■■□□□ 1.09
FAM3B-204ENST00000398652 SLC52A1Q9NWF4 448 aa21.87■■□□□ 1.09
FAM3B-204ENST00000398652 PTPN23Q9H3S7 1636 aa21.86■■□□□ 1.09
FAM3B-204ENST00000398652 VPS8Q8N3P4 1428 aa21.86■■□□□ 1.09
FAM3B-204ENST00000398652 DAPK1P53355 1430 aa21.84■■□□□ 1.09
FAM3B-204ENST00000398652 KANK4Q5T7N3 995 aaPredicted RBP21.83■■□□□ 1.09
FAM3B-204ENST00000398652 C14orf37Q86TY3 774 aa21.83■■□□□ 1.09
FAM3B-204ENST00000398652 CADPS2Q86UW7 1296 aa21.83■■□□□ 1.09
FAM3B-204ENST00000398652 TMEM131LA2VDJ0 1609 aa21.83■■□□□ 1.08
FAM3B-204ENST00000398652 RIMS2Q9UQ26 1411 aa21.82■■□□□ 1.08
FAM3B-204ENST00000398652 RPRD2Q5VT52 1461 aaKnown RBP21.82■■□□□ 1.08
FAM3B-204ENST00000398652 PPP1R15AO75807 674 aaPredicted RBP21.81■■□□□ 1.08
FAM3B-204ENST00000398652 C19orf44Q9H6X5 657 aa21.8■■□□□ 1.08
FAM3B-204ENST00000398652 TBX22Q9Y458 520 aa21.8■■□□□ 1.08
FAM3B-204ENST00000398652 ANKRD30AQ9BXX3 1397 aa21.79■■□□□ 1.08
FAM3B-204ENST00000398652 ATF3P18847 181 aa21.79■■□□□ 1.08
FAM3B-204ENST00000398652 HDGFP51858 240 aaKnown RBP21.79■■□□□ 1.08
FAM3B-204ENST00000398652 AFF2P51816 1311 aa21.79■■□□□ 1.08
FAM3B-204ENST00000398652 NUTM2BA6NNL0 878 aaPredicted RBP21.78■■□□□ 1.08
FAM3B-204ENST00000398652 NUTM2EB1AL46 878 aaPredicted RBP21.78■■□□□ 1.08
FAM3B-204ENST00000398652 NUTM2AQ8IVF1 878 aaPredicted RBP21.78■■□□□ 1.08
FAM3B-204ENST00000398652 RGS12O14924 1447 aa21.78■■□□□ 1.08
FAM3B-204ENST00000398652 NHSL1Q5SYE7 1610 aa21.77■■□□□ 1.08
FAM3B-204ENST00000398652 ADAMTS13Q76LX8 1427 aa21.77■■□□□ 1.08
FAM3B-204ENST00000398652 PIK3R4Q99570 1358 aa21.76■■□□□ 1.07
FAM3B-204ENST00000398652 BRINP3Q76B58 766 aa21.75■■□□□ 1.07
FAM3B-204ENST00000398652 ASXL1Q8IXJ9 1541 aa21.75■■□□□ 1.07
FAM3B-204ENST00000398652 SETD5Q9C0A6 1442 aa21.74■■□□□ 1.07
FAM3B-204ENST00000398652 SRCAPQ6ZRS2 3230 aa21.72■■□□□ 1.07
FAM3B-204ENST00000398652 DCCP43146 1447 aa21.72■■□□□ 1.07
FAM3B-204ENST00000398652 TRPM2O94759 1503 aa21.72■■□□□ 1.07
FAM3B-204ENST00000398652 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.72■■□□□ 1.07
FAM3B-204ENST00000398652 RBM6P78332 1123 aaKnown RBP21.7■■□□□ 1.06
FAM3B-204ENST00000398652 CHIC2Q9UKJ5 165 aa21.7■■□□□ 1.06
FAM3B-204ENST00000398652 ADGRL2O95490 1459 aa21.68■■□□□ 1.06
FAM3B-204ENST00000398652 XRN1Q8IZH2 1706 aaKnown RBP21.67■■□□□ 1.06
FAM3B-204ENST00000398652 QTRT2Q9H974 415 aaKnown RBP21.67■■□□□ 1.06
FAM3B-204ENST00000398652 UNC13BO14795 1591 aa21.66■■□□□ 1.06
FAM3B-204ENST00000398652 MST1RQ04912 1400 aa21.66■■□□□ 1.06
FAM3B-204ENST00000398652 NUTM2DQ5VT03 806 aaPredicted RBP21.66■■□□□ 1.06
FAM3B-204ENST00000398652 C8orf37Q96NL8 207 aa21.66■■□□□ 1.06
FAM3B-204ENST00000398652 PTPRUQ92729 1446 aa21.65■■□□□ 1.06
FAM3B-204ENST00000398652 ATAD2Q6PL18 1390 aa21.65■■□□□ 1.06
FAM3B-204ENST00000398652 E9PCH4 1651 aa21.64■■□□□ 1.05
FAM3B-204ENST00000398652 LRRC59Q96AG4 307 aaKnown RBP21.64■■□□□ 1.05
FAM3B-204ENST00000398652 AMOTL2Q9Y2J4 779 aa21.64■■□□□ 1.05
FAM3B-204ENST00000398652 PNPLA6Q8IY17 1366 aa21.63■■□□□ 1.05
FAM3B-204ENST00000398652 CHGAP10645 457 aaKnown RBP21.63■■□□□ 1.05
FAM3B-204ENST00000398652 ANKRD50Q9ULJ7 1429 aa21.63■■□□□ 1.05
FAM3B-204ENST00000398652 NGLY1Q96IV0 654 aa21.61■■□□□ 1.05
FAM3B-204ENST00000398652 NRXN3Q9Y4C0 1643 aa21.61■■□□□ 1.05
FAM3B-204ENST00000398652 ZRANB1Q9UGI0 708 aa21.58■■□□□ 1.05
FAM3B-204ENST00000398652 NALCNQ8IZF0 1738 aa21.58■■□□□ 1.04
FAM3B-204ENST00000398652 SETBP1Q9Y6X0 1596 aa21.57■■□□□ 1.04
FAM3B-204ENST00000398652 LAMC1P11047 1609 aa21.57■■□□□ 1.04
FAM3B-204ENST00000398652 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
FAM3B-204ENST00000398652 IQGAP3Q86VI3 1631 aa21.55■■□□□ 1.04
FAM3B-204ENST00000398652 ADGRL3Q9HAR2 1447 aa21.55■■□□□ 1.04
FAM3B-204ENST00000398652 DDX17Q92841 729 aaKnown RBP21.54■■□□□ 1.04
FAM3B-204ENST00000398652 ADAMTS2O95450 1211 aa21.53■■□□□ 1.04
FAM3B-204ENST00000398652 TRPC5Q9UL62 973 aaPredicted RBP21.51■■□□□ 1.03
FAM3B-204ENST00000398652 APLP2Q06481 763 aa21.5■■□□□ 1.03
FAM3B-204ENST00000398652 USP21Q9UK80 565 aa21.5■■□□□ 1.03
FAM3B-204ENST00000398652 PTCH1Q13635 1447 aa21.49■■□□□ 1.03
FAM3B-204ENST00000398652 EP400Q96L91 3159 aa21.49■■□□□ 1.03
FAM3B-204ENST00000398652 COL22A1Q8NFW1 1626 aaPredicted RBP21.48■■□□□ 1.03
FAM3B-204ENST00000398652 ATRNO75882 1429 aa21.47■■□□□ 1.03
FAM3B-204ENST00000398652 METP08581 1390 aa21.47■■□□□ 1.03
FAM3B-204ENST00000398652 MARF1Q9Y4F3 1742 aaKnown RBP21.46■■□□□ 1.03
FAM3B-204ENST00000398652 C1orf167Q5SNV9 1468 aa21.46■■□□□ 1.03
FAM3B-204ENST00000398652 CCDC125Q86Z20 511 aa21.46■■□□□ 1.03
FAM3B-204ENST00000398652 FNBP4Q8N3X1 1017 aaPredicted RBP21.45■■□□□ 1.02
FAM3B-204ENST00000398652 SPHKAPQ2M3C7 1700 aa21.44■■□□□ 1.02
FAM3B-204ENST00000398652 SOS2Q07890 1332 aaPredicted RBP21.43■■□□□ 1.02
FAM3B-204ENST00000398652 FAM50AQ14320 339 aaKnown RBP21.42■■□□□ 1.02
FAM3B-204ENST00000398652 LOC105371045A0A1W2PR82 267 aa21.41■■□□□ 1.02
FAM3B-204ENST00000398652 LRP5O75197 1615 aa21.39■■□□□ 1.01
FAM3B-204ENST00000398652 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.38■■□□□ 1.01
FAM3B-204ENST00000398652 MYOM2P54296 1465 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms