RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 KIF3AQ9Y496 699 aa23.83■■□□□ 1.41
KDM2A-202ENST00000398645 SYTL4Q96C24 671 aaPredicted RBP23.83■■□□□ 1.41
KDM2A-202ENST00000398645 BRPF3Q9ULD4 1205 aa23.83■■□□□ 1.4
KDM2A-202ENST00000398645 MAP7D2Q96T17 732 aa23.82■■□□□ 1.4
KDM2A-202ENST00000398645 SASS6Q6UVJ0 657 aa23.81■■□□□ 1.4
KDM2A-202ENST00000398645 TRIM34Q9BYJ4 488 aa23.81■■□□□ 1.4
KDM2A-202ENST00000398645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.81■■□□□ 1.42e-6■■■■■ 62.6
KDM2A-202ENST00000398645 TERF2IPQ9NYB0 399 aa23.81■■□□□ 1.4
KDM2A-202ENST00000398645 KIF3BO15066 747 aa23.81■■□□□ 1.4
KDM2A-202ENST00000398645 MNS1Q8NEH6 495 aa23.8■■□□□ 1.4
KDM2A-202ENST00000398645 CPLX1O14810 134 aa23.8■■□□□ 1.4
KDM2A-202ENST00000398645 C9orf78Q9NZ63 289 aaPredicted RBP23.8■■□□□ 1.4
KDM2A-202ENST00000398645 ZKSCAN2Q63HK3 967 aa23.79■■□□□ 1.4
KDM2A-202ENST00000398645 IL27Q8NEV9 243 aa23.79■■□□□ 1.4
KDM2A-202ENST00000398645 ZFYVE27Q5T4F4 411 aa23.79■■□□□ 1.4
KDM2A-202ENST00000398645 CTDP1Q9Y5B0 961 aaPredicted RBP23.79■■□□□ 1.4
KDM2A-202ENST00000398645 LNPKQ9C0E8 428 aa23.79■■□□□ 1.4
KDM2A-202ENST00000398645 APAF1O14727 1248 aa23.78■■□□□ 1.4
KDM2A-202ENST00000398645 NLRP13Q86W25 1043 aa23.78■■□□□ 1.4
KDM2A-202ENST00000398645 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
KDM2A-202ENST00000398645 ST20-MTHFSA0A0A6YYL1 179 aa23.78■■□□□ 1.4
KDM2A-202ENST00000398645 IFIT2P09913 472 aaKnown RBP23.78■■□□□ 1.4
KDM2A-202ENST00000398645 SPC24Q8NBT2 197 aa23.77■■□□□ 1.4
KDM2A-202ENST00000398645 IPO7O95373 1038 aaKnown RBP23.77■■□□□ 1.4
KDM2A-202ENST00000398645 CAGE1Q8TC20 777 aa23.77■■□□□ 1.4
KDM2A-202ENST00000398645 C1orf141Q5JVX7 400 aa23.76■■□□□ 1.39
KDM2A-202ENST00000398645 KRI1Q8N9T8 703 aaKnown RBP23.76■■□□□ 1.39
KDM2A-202ENST00000398645 ATP6V1DQ9Y5K8 247 aa23.76■■□□□ 1.39
KDM2A-202ENST00000398645 KLHL34Q8N239 644 aa23.76■■□□□ 1.39
KDM2A-202ENST00000398645 MYBBP1AQ9BQG0 1328 aaKnown RBP23.75■■□□□ 1.39
KDM2A-202ENST00000398645 SMC3Q9UQE7 1217 aa23.75■■□□□ 1.39
KDM2A-202ENST00000398645 CEBPZQ03701 1054 aaKnown RBP23.75■■□□□ 1.39
KDM2A-202ENST00000398645 ABCC8Q09428 1581 aa23.75■■□□□ 1.39
KDM2A-202ENST00000398645 AK7Q96M32 723 aa23.74■■□□□ 1.39
KDM2A-202ENST00000398645 CUX2O14529 1486 aa23.74■■□□□ 1.39
KDM2A-202ENST00000398645 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.74■■□□□ 1.39
KDM2A-202ENST00000398645 BRPF1P55201 1214 aaPredicted RBP23.74■■□□□ 1.39
KDM2A-202ENST00000398645 NFKBIBQ15653 356 aa23.74■■□□□ 1.39
KDM2A-202ENST00000398645 HSP90AB2PQ58FF8 381 aa23.74■■□□□ 1.39
KDM2A-202ENST00000398645 VPS37DQ86XT2 251 aa23.74■■□□□ 1.39
KDM2A-202ENST00000398645 CT47A1Q5JQC4 288 aaPredicted RBP23.73■■□□□ 1.39
KDM2A-202ENST00000398645 EVA1CP58658 441 aa23.73■■□□□ 1.39
KDM2A-202ENST00000398645 KIF15Q9NS87 1388 aa23.73■■□□□ 1.39
KDM2A-202ENST00000398645 PANK1Q8TE04 598 aa23.73■■□□□ 1.39
KDM2A-202ENST00000398645 AIMP1Q12904 312 aaKnown RBP23.72■■□□□ 1.39
KDM2A-202ENST00000398645 LMOD3Q0VAK6 560 aa23.72■■□□□ 1.39
KDM2A-202ENST00000398645 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
KDM2A-202ENST00000398645 CARMIL1Q5VZK9 1371 aa23.71■■□□□ 1.39
KDM2A-202ENST00000398645 FMNL2Q96PY5 1086 aa23.71■■□□□ 1.39
KDM2A-202ENST00000398645 MINK1Q8N4C8 1332 aaPredicted RBP23.71■■□□□ 1.39
KDM2A-202ENST00000398645 HMOX1P09601 288 aa23.7■■□□□ 1.38
KDM2A-202ENST00000398645 CAVIN1Q6NZI2 390 aaKnown RBP23.7■■□□□ 1.38
KDM2A-202ENST00000398645 ANKRD20A12PQ8NF67 263 aa23.69■■□□□ 1.38
KDM2A-202ENST00000398645 H0YHG0 523 aa23.69■■□□□ 1.38
KDM2A-202ENST00000398645 ATP2B1P20020 1258 aa23.69■■□□□ 1.38
KDM2A-202ENST00000398645 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.69■■□□□ 1.38
KDM2A-202ENST00000398645 SMC2O95347 1197 aa23.69■■□□□ 1.38
KDM2A-202ENST00000398645 ZKSCAN1P17029 563 aaPredicted RBP23.69■■□□□ 1.38
KDM2A-202ENST00000398645 NASPP49321 788 aaPredicted RBP23.69■■□□□ 1.38
KDM2A-202ENST00000398645 HSP90AB3PQ58FF7 597 aa23.69■■□□□ 1.38
KDM2A-202ENST00000398645 NOL10Q9BSC4 688 aaKnown RBP23.68■■□□□ 1.38
KDM2A-202ENST00000398645 CHMP5Q9NZZ3 219 aa23.68■■□□□ 1.38
KDM2A-202ENST00000398645 NEUROD6Q96NK8 337 aa23.67■■□□□ 1.38
KDM2A-202ENST00000398645 ODF2Q5BJF6 829 aa23.67■■□□□ 1.38
KDM2A-202ENST00000398645 FAM177BA6PVY3 158 aa23.66■■□□□ 1.38
KDM2A-202ENST00000398645 EPS15P42566 896 aa23.66■■□□□ 1.38
KDM2A-202ENST00000398645 RIPK4P57078 832 aa23.66■■□□□ 1.38
KDM2A-202ENST00000398645 CCDC43Q96MW1 224 aaKnown RBP23.66■■□□□ 1.38
KDM2A-202ENST00000398645 NUTM2GQ5VZR2 741 aa23.66■■□□□ 1.38
KDM2A-202ENST00000398645 C22orf23Q9BZE7 217 aa23.65■■□□□ 1.38
KDM2A-202ENST00000398645 FKBP5Q13451 457 aaPredicted RBP23.65■■□□□ 1.38
KDM2A-202ENST00000398645 AMOTL1Q8IY63 956 aa23.65■■□□□ 1.38
KDM2A-202ENST00000398645 C1orf115Q9H7X2 142 aa23.65■■□□□ 1.38
KDM2A-202ENST00000398645 E9PSI1 815 aa23.64■■□□□ 1.38
KDM2A-202ENST00000398645 CCDC47Q96A33 483 aaKnown RBP23.64■■□□□ 1.38
KDM2A-202ENST00000398645 CGNL1Q0VF96 1302 aa23.64■■□□□ 1.38
KDM2A-202ENST00000398645 WASHC4Q2M389 1173 aa23.64■■□□□ 1.38
KDM2A-202ENST00000398645 NOM1Q5C9Z4 860 aaKnown RBP23.64■■□□□ 1.37
KDM2A-202ENST00000398645 TTC5Q8N0Z6 440 aa23.64■■□□□ 1.37
KDM2A-202ENST00000398645 COG3Q96JB2 828 aa23.64■■□□□ 1.37
KDM2A-202ENST00000398645 TEFQ10587 303 aa23.64■■□□□ 1.37
KDM2A-202ENST00000398645 MAP4K4O95819 1239 aaPredicted RBP23.63■■□□□ 1.37
KDM2A-202ENST00000398645 PDE3BQ13370 1112 aa23.63■■□□□ 1.37
KDM2A-202ENST00000398645 RUFY2Q8WXA3 655 aa23.63■■□□□ 1.37
KDM2A-202ENST00000398645 CHMP4CQ96CF2 233 aa23.63■■□□□ 1.37
KDM2A-202ENST00000398645 HDAC5Q9UQL6 1122 aa23.63■■□□□ 1.37
KDM2A-202ENST00000398645 ERICH2A1L162 156 aa23.63■■□□□ 1.37
KDM2A-202ENST00000398645 FAM177A1Q8N128 213 aaPredicted RBP23.63■■□□□ 1.37
KDM2A-202ENST00000398645 WASHC2CQ9Y4E1 1318 aa23.63■■□□□ 1.37
KDM2A-202ENST00000398645 REC8O95072 547 aa23.63■■□□□ 1.37
KDM2A-202ENST00000398645 TRDNQ13061 729 aa23.62■■□□□ 1.37
KDM2A-202ENST00000398645 ARGLU1Q9NWB6 273 aaPredicted RBP23.62■■□□□ 1.37
KDM2A-202ENST00000398645 HSP90B2PQ58FF3 399 aa23.62■■□□□ 1.37
KDM2A-202ENST00000398645 DZIP1LQ8IYY4 767 aaKnown RBP23.62■■□□□ 1.37
KDM2A-202ENST00000398645 CCDC73Q6ZRK6 1079 aa23.61■■□□□ 1.37
KDM2A-202ENST00000398645 HOOK1Q9UJC3 728 aaKnown RBP23.6■■□□□ 1.37
KDM2A-202ENST00000398645 PRPF40AO75400 957 aaKnown RBP23.6■■□□□ 1.37
KDM2A-202ENST00000398645 CWC22Q9HCG8 908 aaKnown RBP23.6■■□□□ 1.37
KDM2A-202ENST00000398645 TRIM5Q9C035 493 aa23.6■■□□□ 1.37
KDM2A-202ENST00000398645 G3BP1Q13283 466 aaKnown RBP eCLIP23.59■■□□□ 1.372e-6■□□□□ 9.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms