RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 FAM161AQ3B820 660 aa17.8■□□□□ 0.44
PCDHGA11-201ENST00000398587 DEKP35659 375 aaKnown RBP17.79■□□□□ 0.44
PCDHGA11-201ENST00000398587 GRIN2AQ12879 1464 aa17.79■□□□□ 0.44
PCDHGA11-201ENST00000398587 MAGI1Q96QZ7 1491 aaPredicted RBP17.79■□□□□ 0.44
PCDHGA11-201ENST00000398587 WDR97A6NE52 1622 aa17.79■□□□□ 0.44
PCDHGA11-201ENST00000398587 ADAMTS8Q9UP79 889 aa17.78■□□□□ 0.44
PCDHGA11-201ENST00000398587 CABP2Q9NPB3 220 aa17.78■□□□□ 0.44
PCDHGA11-201ENST00000398587 GGNBP2Q9H3C7 697 aa17.78■□□□□ 0.44
PCDHGA11-201ENST00000398587 DDX19BQ9UMR2 479 aa17.77■□□□□ 0.44
PCDHGA11-201ENST00000398587 PTMSP20962 102 aa17.77■□□□□ 0.43
PCDHGA11-201ENST00000398587 ZNF330Q9Y3S2 320 aaPredicted RBP17.77■□□□□ 0.43
PCDHGA11-201ENST00000398587 GPATCH3Q96I76 525 aa17.76■□□□□ 0.43
PCDHGA11-201ENST00000398587 PLCB2Q00722 1185 aa17.76■□□□□ 0.43
PCDHGA11-201ENST00000398587 PLB1Q6P1J6 1458 aa17.76■□□□□ 0.43
PCDHGA11-201ENST00000398587 PPP2R1AP30153 589 aa17.76■□□□□ 0.43
PCDHGA11-201ENST00000398587 TRIM6-TRIM34B2RNG4 842 aa17.75■□□□□ 0.43
PCDHGA11-201ENST00000398587 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
PCDHGA11-201ENST00000398587 SLC52A1Q9NWF4 448 aa17.75■□□□□ 0.43
PCDHGA11-201ENST00000398587 CCDC141Q6ZP82 1450 aa17.75■□□□□ 0.43
PCDHGA11-201ENST00000398587 MTHFSP49914 203 aa17.75■□□□□ 0.43
PCDHGA11-201ENST00000398587 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
PCDHGA11-201ENST00000398587 ABCC5O15440 1437 aa17.74■□□□□ 0.43
PCDHGA11-201ENST00000398587 PTPN23Q9H3S7 1636 aa17.74■□□□□ 0.43
PCDHGA11-201ENST00000398587 DNTTIP2Q5QJE6 756 aaKnown RBP17.74■□□□□ 0.43
PCDHGA11-201ENST00000398587 TEFQ10587 303 aa17.73■□□□□ 0.43
PCDHGA11-201ENST00000398587 API5Q9BZZ5 524 aaKnown RBP17.73■□□□□ 0.43
PCDHGA11-201ENST00000398587 ANKRD30BQ9BXX2 1392 aa17.73■□□□□ 0.43
PCDHGA11-201ENST00000398587 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
PCDHGA11-201ENST00000398587 ANKRD45Q5TZF3 282 aa17.72■□□□□ 0.43
PCDHGA11-201ENST00000398587 CAMSAP2Q08AD1 1489 aa17.72■□□□□ 0.43
PCDHGA11-201ENST00000398587 CDK11BP21127 795 aaKnown RBP17.71■□□□□ 0.43
PCDHGA11-201ENST00000398587 GNAI1P63096 354 aa17.71■□□□□ 0.43
PCDHGA11-201ENST00000398587 C1orf141Q5JVX7 400 aa17.71■□□□□ 0.43
PCDHGA11-201ENST00000398587 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
PCDHGA11-201ENST00000398587 KIF16BQ96L93 1317 aa17.71■□□□□ 0.43
PCDHGA11-201ENST00000398587 AAMPQ13685 434 aa17.71■□□□□ 0.43
PCDHGA11-201ENST00000398587 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
PCDHGA11-201ENST00000398587 AKNAQ7Z591 1439 aa17.7■□□□□ 0.42
PCDHGA11-201ENST00000398587 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
PCDHGA11-201ENST00000398587 RPGRIP1LQ68CZ1 1315 aa17.69■□□□□ 0.42
PCDHGA11-201ENST00000398587 GORABQ5T7V8 394 aa17.69■□□□□ 0.42
PCDHGA11-201ENST00000398587 ERBINQ96RT1 1412 aa17.68■□□□□ 0.42
PCDHGA11-201ENST00000398587 SLC12A5Q9H2X9 1139 aa17.68■□□□□ 0.42
PCDHGA11-201ENST00000398587 FANCIQ9NVI1 1328 aa17.68■□□□□ 0.42
PCDHGA11-201ENST00000398587 RAPGEF3O95398 923 aa17.68■□□□□ 0.42
PCDHGA11-201ENST00000398587 NCOA1Q15788 1441 aa17.68■□□□□ 0.42
PCDHGA11-201ENST00000398587 PSME1Q06323 249 aa17.67■□□□□ 0.42
PCDHGA11-201ENST00000398587 CDCA7LQ96GN5 454 aa17.67■□□□□ 0.42
PCDHGA11-201ENST00000398587 PRAM1Q96QH2 718 aa17.67■□□□□ 0.42
PCDHGA11-201ENST00000398587 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
PCDHGA11-201ENST00000398587 HMOX1P09601 288 aa17.67■□□□□ 0.42
PCDHGA11-201ENST00000398587 TAF7LQ5H9L4 462 aa17.67■□□□□ 0.42
PCDHGA11-201ENST00000398587 ST18O60284 1047 aa17.66■□□□□ 0.42
PCDHGA11-201ENST00000398587 RTN4Q9NQC3 1192 aaKnown RBP17.66■□□□□ 0.42
PCDHGA11-201ENST00000398587 GOLGA6L6A8MZA4 724 aa17.65■□□□□ 0.42
PCDHGA11-201ENST00000398587 NRDCO43847 1150 aa17.65■□□□□ 0.42
PCDHGA11-201ENST00000398587 KIF14Q15058 1648 aa17.64■□□□□ 0.41
PCDHGA11-201ENST00000398587 GZF1Q9H116 711 aaPredicted RBP17.64■□□□□ 0.41
PCDHGA11-201ENST00000398587 TXNDC2Q86VQ3 553 aa17.63■□□□□ 0.41
PCDHGA11-201ENST00000398587 USP35Q9P2H5 1018 aa17.63■□□□□ 0.41
PCDHGA11-201ENST00000398587 NAP1L5Q96NT1 182 aaPredicted RBP17.62■□□□□ 0.41
PCDHGA11-201ENST00000398587 CCDC9Q9Y3X0 531 aaKnown RBP17.62■□□□□ 0.41
PCDHGA11-201ENST00000398587 HTATSF1O43719 755 aaKnown RBP17.61■□□□□ 0.41
PCDHGA11-201ENST00000398587 CCDC184Q52MB2 194 aa17.61■□□□□ 0.41
PCDHGA11-201ENST00000398587 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
PCDHGA11-201ENST00000398587 SYAP1Q96A49 352 aaPredicted RBP17.61■□□□□ 0.41
PCDHGA11-201ENST00000398587 EIF2S2P20042 333 aaKnown RBP17.6■□□□□ 0.41
PCDHGA11-201ENST00000398587 NLRP6P59044 892 aa17.6■□□□□ 0.41
PCDHGA11-201ENST00000398587 NEXNQ0ZGT2 675 aa17.6■□□□□ 0.41
PCDHGA11-201ENST00000398587 TSPYL4Q9UJ04 414 aa17.6■□□□□ 0.41
PCDHGA11-201ENST00000398587 FKBP5Q13451 457 aaPredicted RBP17.59■□□□□ 0.41
PCDHGA11-201ENST00000398587 GNL2Q13823 731 aaKnown RBP17.59■□□□□ 0.41
PCDHGA11-201ENST00000398587 RILPL2Q969X0 211 aa17.59■□□□□ 0.41
PCDHGA11-201ENST00000398587 MSNP26038 577 aaKnown RBP17.59■□□□□ 0.41
PCDHGA11-201ENST00000398587 TTC5Q8N0Z6 440 aa17.59■□□□□ 0.41
PCDHGA11-201ENST00000398587 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
PCDHGA11-201ENST00000398587 CDK19Q9BWU1 502 aa17.58■□□□□ 0.4
PCDHGA11-201ENST00000398587 RPRD2Q5VT52 1461 aaKnown RBP17.57■□□□□ 0.4
PCDHGA11-201ENST00000398587 C9orf78Q9NZ63 289 aaPredicted RBP17.57■□□□□ 0.4
PCDHGA11-201ENST00000398587 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
PCDHGA11-201ENST00000398587 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
PCDHGA11-201ENST00000398587 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
PCDHGA11-201ENST00000398587 CABP1Q9NZU7 370 aa17.57■□□□□ 0.4
PCDHGA11-201ENST00000398587 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
PCDHGA11-201ENST00000398587 ZNF692Q9BU19 519 aaPredicted RBP17.56■□□□□ 0.4
PCDHGA11-201ENST00000398587 REC8O95072 547 aa17.56■□□□□ 0.4
PCDHGA11-201ENST00000398587 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
PCDHGA11-201ENST00000398587 CD109Q6YHK3 1445 aa17.56■□□□□ 0.4
PCDHGA11-201ENST00000398587 ATAD2Q6PL18 1390 aa17.56■□□□□ 0.4
PCDHGA11-201ENST00000398587 GOLGA6L3A6NEY3 463 aa17.56■□□□□ 0.4
PCDHGA11-201ENST00000398587 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
PCDHGA11-201ENST00000398587 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
PCDHGA11-201ENST00000398587 NOL8Q76FK4 1167 aaKnown RBP17.55■□□□□ 0.4
PCDHGA11-201ENST00000398587 THEMISQ8N1K5 641 aaPredicted RBP17.55■□□□□ 0.4
PCDHGA11-201ENST00000398587 NECTIN2Q92692 538 aa17.55■□□□□ 0.4
PCDHGA11-201ENST00000398587 EVA1CP58658 441 aa17.55■□□□□ 0.4
PCDHGA11-201ENST00000398587 EXOSC9Q06265 439 aaKnown RBP17.54■□□□□ 0.4
PCDHGA11-201ENST00000398587 RAPGEF4Q8WZA2 1011 aa17.53■□□□□ 0.4
PCDHGA11-201ENST00000398587 LNPKQ9C0E8 428 aa17.53■□□□□ 0.4
PCDHGA11-201ENST00000398587 ADGRL1O94910 1474 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms