RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
TMF1-201ENST00000398559 TEX35Q5T0J7 233 aa14.41□□□□□ -0.1
TMF1-201ENST00000398559 SYNE3Q6ZMZ3 975 aa14.4□□□□□ -0.1
TMF1-201ENST00000398559 FAM43AQ8N2R8 423 aa14.4□□□□□ -0.1
TMF1-201ENST00000398559 PCMTD1Q96MG8 357 aaPredicted RBP14.4□□□□□ -0.1
TMF1-201ENST00000398559 WASHC2CQ9Y4E1 1318 aa14.4□□□□□ -0.1
TMF1-201ENST00000398559 BICD2Q8TD16 824 aa14.4□□□□□ -0.1
TMF1-201ENST00000398559 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
TMF1-201ENST00000398559 ZKSCAN1P17029 563 aaPredicted RBP14.39□□□□□ -0.11
TMF1-201ENST00000398559 TRIM29Q14134 588 aa14.39□□□□□ -0.11
TMF1-201ENST00000398559 DZIP1LQ8IYY4 767 aaKnown RBP14.39□□□□□ -0.11
TMF1-201ENST00000398559 GTF2E1P29083 439 aaPredicted RBP14.38□□□□□ -0.11
TMF1-201ENST00000398559 TDRD9Q8NDG6 1382 aaKnown RBP14.38□□□□□ -0.11
TMF1-201ENST00000398559 FBXW7Q969H0 707 aa14.38□□□□□ -0.11
TMF1-201ENST00000398559 COG3Q96JB2 828 aa14.38□□□□□ -0.11
TMF1-201ENST00000398559 EID1Q9Y6B2 187 aa14.38□□□□□ -0.11
TMF1-201ENST00000398559 C1orf141Q5JVX7 400 aa14.37□□□□□ -0.11
TMF1-201ENST00000398559 NFKBIBQ15653 356 aa14.37□□□□□ -0.11
TMF1-201ENST00000398559 VPS37CA5D8V6 355 aaPredicted RBP14.36□□□□□ -0.11
TMF1-201ENST00000398559 EIF2S2P20042 333 aaKnown RBP14.36□□□□□ -0.11
TMF1-201ENST00000398559 CPLX2Q6PUV4 134 aaKnown RBP14.36□□□□□ -0.11
TMF1-201ENST00000398559 SASS6Q6UVJ0 657 aa14.36□□□□□ -0.11
TMF1-201ENST00000398559 NECTIN2Q92692 538 aa14.36□□□□□ -0.11
TMF1-201ENST00000398559 C9orf78Q9NZ63 289 aaPredicted RBP14.36□□□□□ -0.11
TMF1-201ENST00000398559 IFIT2P09913 472 aaKnown RBP14.36□□□□□ -0.11
TMF1-201ENST00000398559 IPO7O95373 1038 aaKnown RBP14.36□□□□□ -0.11
TMF1-201ENST00000398559 RSPH4AQ5TD94 716 aa14.36□□□□□ -0.11
TMF1-201ENST00000398559 NGEFQ8N5V2 710 aa14.36□□□□□ -0.11
TMF1-201ENST00000398559 RAPGEF2Q9Y4G8 1499 aa14.36□□□□□ -0.11
TMF1-201ENST00000398559 NUCB2P80303 420 aa14.35□□□□□ -0.11
TMF1-201ENST00000398559 INTS3Q68E01 1043 aaKnown RBP14.35□□□□□ -0.11
TMF1-201ENST00000398559 C22orf23Q9BZE7 217 aa14.35□□□□□ -0.11
TMF1-201ENST00000398559 IFT57Q9NWB7 429 aa14.35□□□□□ -0.11
TMF1-201ENST00000398559 SMC3Q9UQE7 1217 aa14.35□□□□□ -0.11
TMF1-201ENST00000398559 EVC2Q86UK5 1308 aa14.35□□□□□ -0.11
TMF1-201ENST00000398559 LRRFIP1Q32MZ4 808 aaKnown RBP14.35□□□□□ -0.11
TMF1-201ENST00000398559 ANKRD20A12PQ8NF67 263 aa14.35□□□□□ -0.11
TMF1-201ENST00000398559 BCL11BQ9C0K0 894 aaPredicted RBP14.35□□□□□ -0.11
TMF1-201ENST00000398559 CPLX1O14810 134 aa14.34□□□□□ -0.11
TMF1-201ENST00000398559 FOSBP53539 338 aa14.34□□□□□ -0.11
TMF1-201ENST00000398559 WWC1Q8IX03 1113 aa14.34□□□□□ -0.11
TMF1-201ENST00000398559 RIPK4P57078 832 aa14.34□□□□□ -0.11
TMF1-201ENST00000398559 UACAQ9BZF9 1416 aa14.34□□□□□ -0.11
TMF1-201ENST00000398559 HOOK1Q9UJC3 728 aaKnown RBP14.34□□□□□ -0.11
TMF1-201ENST00000398559 NEXNQ0ZGT2 675 aa14.33□□□□□ -0.12
TMF1-201ENST00000398559 R3HCC1Q9Y3T6 440 aaKnown RBP14.33□□□□□ -0.12
TMF1-201ENST00000398559 APPP05067 770 aa14.33□□□□□ -0.12
TMF1-201ENST00000398559 API5Q9BZZ5 524 aaKnown RBP14.33□□□□□ -0.12
TMF1-201ENST00000398559 ROCK1Q13464 1354 aa14.33□□□□□ -0.12
TMF1-201ENST00000398559 LNPKQ9C0E8 428 aa14.33□□□□□ -0.12
TMF1-201ENST00000398559 TEFQ10587 303 aa14.32□□□□□ -0.12
TMF1-201ENST00000398559 RNF20Q5VTR2 975 aa14.32□□□□□ -0.12
TMF1-201ENST00000398559 CCDC47Q96A33 483 aaKnown RBP14.32□□□□□ -0.12
TMF1-201ENST00000398559 DIAPH1O60610 1272 aaKnown RBP14.32□□□□□ -0.12
TMF1-201ENST00000398559 NASPP49321 788 aaPredicted RBP14.31□□□□□ -0.12
TMF1-201ENST00000398559 MNS1Q8NEH6 495 aa14.31□□□□□ -0.12
TMF1-201ENST00000398559 CCDC39Q9UFE4 941 aa14.3□□□□□ -0.12
TMF1-201ENST00000398559 ARGLU1Q9NWB6 273 aaPredicted RBP14.3□□□□□ -0.12
TMF1-201ENST00000398559 MRE11P49959 708 aa14.3□□□□□ -0.12
TMF1-201ENST00000398559 WIZO95785 1651 aa14.3□□□□□ -0.12
TMF1-201ENST00000398559 RUNDC1Q96C34 613 aa14.3□□□□□ -0.12
TMF1-201ENST00000398559 MINK1Q8N4C8 1332 aaPredicted RBP14.3□□□□□ -0.12
TMF1-201ENST00000398559 RAD21O60216 631 aa14.3□□□□□ -0.12
TMF1-201ENST00000398559 NFXL1Q6ZNB6 911 aa14.3□□□□□ -0.12
TMF1-201ENST00000398559 RUFY1Q96T51 708 aa14.29□□□□□ -0.12
TMF1-201ENST00000398559 PANK1Q8TE04 598 aa14.29□□□□□ -0.12
TMF1-201ENST00000398559 TRDNQ13061 729 aa14.29□□□□□ -0.12
TMF1-201ENST00000398559 CCDC73Q6ZRK6 1079 aa14.29□□□□□ -0.12
TMF1-201ENST00000398559 G3BP1Q13283 466 aaKnown RBP eCLIP14.28□□□□□ -0.12
TMF1-201ENST00000398559 FKBP5Q13451 457 aaPredicted RBP14.28□□□□□ -0.12
TMF1-201ENST00000398559 AMOTL1Q8IY63 956 aa14.28□□□□□ -0.12
TMF1-201ENST00000398559 TTC5Q8N0Z6 440 aa14.28□□□□□ -0.12
TMF1-201ENST00000398559 AK7Q96M32 723 aa14.28□□□□□ -0.12
TMF1-201ENST00000398559 SMARCA2P51531 1590 aa14.28□□□□□ -0.12
TMF1-201ENST00000398559 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.27□□□□□ -0.12
TMF1-201ENST00000398559 NOL10Q9BSC4 688 aaKnown RBP14.27□□□□□ -0.12
TMF1-201ENST00000398559 NAP1L1P55209 391 aaKnown RBP14.27□□□□□ -0.13
TMF1-201ENST00000398559 RNF214Q8ND24 703 aa14.27□□□□□ -0.13
TMF1-201ENST00000398559 TCEAL9Q9UHQ7 104 aa14.27□□□□□ -0.13
TMF1-201ENST00000398559 PDS5BQ9NTI5 1447 aa14.27□□□□□ -0.13
TMF1-201ENST00000398559 NOM1Q5C9Z4 860 aaKnown RBP14.26□□□□□ -0.13
TMF1-201ENST00000398559 ACBD3Q9H3P7 528 aa14.26□□□□□ -0.13
TMF1-201ENST00000398559 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
TMF1-201ENST00000398559 TRAK2O60296 914 aa14.26□□□□□ -0.13
TMF1-201ENST00000398559 CDC45O75419 566 aa14.26□□□□□ -0.13
TMF1-201ENST00000398559 DHX16O60231 1041 aaKnown RBP14.25□□□□□ -0.13
TMF1-201ENST00000398559 TOP2AP11388 1531 aaKnown RBP14.25□□□□□ -0.13
TMF1-201ENST00000398559 ERICH2A1L162 156 aa14.25□□□□□ -0.13
TMF1-201ENST00000398559 CCDC7Q96M83 1385 aa14.25□□□□□ -0.13
TMF1-201ENST00000398559 DDX58O95786 925 aaKnown RBP14.25□□□□□ -0.13
TMF1-201ENST00000398559 ERC2O15083 957 aa14.24□□□□□ -0.13
TMF1-201ENST00000398559 FBXO3Q9UK99 471 aa14.24□□□□□ -0.13
TMF1-201ENST00000398559 CNTLNQ9NXG0 1405 aa14.24□□□□□ -0.13
TMF1-201ENST00000398559 PDILTQ8N807 584 aa14.24□□□□□ -0.13
TMF1-201ENST00000398559 HSP90B2PQ58FF3 399 aa14.24□□□□□ -0.13
TMF1-201ENST00000398559 CAVIN1Q6NZI2 390 aaKnown RBP14.24□□□□□ -0.13
TMF1-201ENST00000398559 KIF7Q2M1P5 1343 aa14.24□□□□□ -0.13
TMF1-201ENST00000398559 TRIM34Q9BYJ4 488 aa14.24□□□□□ -0.13
TMF1-201ENST00000398559 NAT10Q9H0A0 1025 aaKnown RBP14.23□□□□□ -0.13
TMF1-201ENST00000398559 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms