RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
TCF4-203ENST00000398339 ZNF521Q96K83 1311 aa10.74□□□□□ -0.69
TCF4-203ENST00000398339 ABCA8O94911 1581 aa10.74□□□□□ -0.69
TCF4-203ENST00000398339 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.73□□□□□ -0.69
TCF4-203ENST00000398339 ATP10BO94823 1461 aa10.73□□□□□ -0.69
TCF4-203ENST00000398339 EIF2AK4Q9P2K8 1649 aaKnown RBP10.73□□□□□ -0.69
TCF4-203ENST00000398339 CCDC141Q6ZP82 1450 aa10.73□□□□□ -0.69
TCF4-203ENST00000398339 SYNJ2O15056 1496 aa10.72□□□□□ -0.69
TCF4-203ENST00000398339 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
TCF4-203ENST00000398339 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
TCF4-203ENST00000398339 NUP160Q12769 1436 aa10.72□□□□□ -0.69
TCF4-203ENST00000398339 FRAT2O75474 233 aaPredicted RBP10.72□□□□□ -0.69
TCF4-203ENST00000398339 PPP2R1AP30153 589 aa10.72□□□□□ -0.69
TCF4-203ENST00000398339 CLASP1Q7Z460 1538 aa10.71□□□□□ -0.7
TCF4-203ENST00000398339 RGS3P49796 1198 aa10.71□□□□□ -0.7
TCF4-203ENST00000398339 CHMP7Q8WUX9 453 aaPredicted RBP10.71□□□□□ -0.7
TCF4-203ENST00000398339 JPH4Q96JJ6 628 aa10.71□□□□□ -0.7
TCF4-203ENST00000398339 MAGI2Q86UL8 1455 aa10.7□□□□□ -0.7
TCF4-203ENST00000398339 UNC13BO14795 1591 aa10.7□□□□□ -0.7
TCF4-203ENST00000398339 WDR7Q9Y4E6 1490 aa10.7□□□□□ -0.7
TCF4-203ENST00000398339 SLFN5Q08AF3 891 aa10.7□□□□□ -0.7
TCF4-203ENST00000398339 SAMD9LQ8IVG5 1584 aa10.69□□□□□ -0.7
TCF4-203ENST00000398339 RSPH4AQ5TD94 716 aa10.69□□□□□ -0.7
TCF4-203ENST00000398339 KNSTRNQ9Y448 316 aa10.69□□□□□ -0.7
TCF4-203ENST00000398339 EIF3AQ14152 1382 aaKnown RBP10.69□□□□□ -0.7
TCF4-203ENST00000398339 DHX37Q8IY37 1157 aaKnown RBP10.69□□□□□ -0.7
TCF4-203ENST00000398339 TRMT2AQ8IZ69 625 aaKnown RBP10.69□□□□□ -0.7
TCF4-203ENST00000398339 MYO5CQ9NQX4 1742 aa10.68□□□□□ -0.7
TCF4-203ENST00000398339 AMER1Q5JTC6 1135 aaPredicted RBP10.68□□□□□ -0.7
TCF4-203ENST00000398339 RNF17Q9BXT8 1623 aaKnown RBP10.68□□□□□ -0.7
TCF4-203ENST00000398339 CHMP4AQ9BY43 222 aa10.68□□□□□ -0.7
TCF4-203ENST00000398339 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
TCF4-203ENST00000398339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.67□□□□□ -0.7
TCF4-203ENST00000398339 BRD2P25440 801 aaKnown RBP10.67□□□□□ -0.7
TCF4-203ENST00000398339 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
TCF4-203ENST00000398339 ATP10AO60312 1499 aa10.66□□□□□ -0.7
TCF4-203ENST00000398339 FAM43AQ8N2R8 423 aa10.66□□□□□ -0.7
TCF4-203ENST00000398339 IQGAP3Q86VI3 1631 aa10.66□□□□□ -0.7
TCF4-203ENST00000398339 USP19O94966 1318 aa10.66□□□□□ -0.7
TCF4-203ENST00000398339 MAST1Q9Y2H9 1570 aa10.66□□□□□ -0.7
TCF4-203ENST00000398339 PREX2Q70Z35 1606 aa10.66□□□□□ -0.7
TCF4-203ENST00000398339 NKTRP30414 1462 aaKnown RBP10.65□□□□□ -0.7
TCF4-203ENST00000398339 ASXL1Q8IXJ9 1541 aa10.65□□□□□ -0.7
TCF4-203ENST00000398339 CDC42BPBQ9Y5S2 1711 aa10.65□□□□□ -0.71
TCF4-203ENST00000398339 FBLN2P98095 1184 aa10.65□□□□□ -0.71
TCF4-203ENST00000398339 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.71
TCF4-203ENST00000398339 SYNMO15061 1565 aa10.64□□□□□ -0.71
TCF4-203ENST00000398339 BCAR3O75815 825 aa10.64□□□□□ -0.71
TCF4-203ENST00000398339 IGHDP01880 384 aa10.64□□□□□ -0.71
TCF4-203ENST00000398339 ABCC2Q92887 1545 aa10.64□□□□□ -0.71
TCF4-203ENST00000398339 CCDC146Q8IYE0 955 aa10.64□□□□□ -0.71
TCF4-203ENST00000398339 SYCP2Q9BX26 1530 aa10.64□□□□□ -0.71
TCF4-203ENST00000398339 CDCA8Q53HL2 280 aa10.63□□□□□ -0.71
TCF4-203ENST00000398339 NPC1L1Q9UHC9 1359 aa10.63□□□□□ -0.71
TCF4-203ENST00000398339 E9PSI1 815 aa10.63□□□□□ -0.71
TCF4-203ENST00000398339 VIRMAQ69YN4 1812 aaKnown RBP10.62□□□□□ -0.71
TCF4-203ENST00000398339 IQGAP1P46940 1657 aa10.62□□□□□ -0.71
TCF4-203ENST00000398339 APAF1O14727 1248 aa10.62□□□□□ -0.71
TCF4-203ENST00000398339 BECN1Q14457 450 aa10.62□□□□□ -0.71
TCF4-203ENST00000398339 CGNL1Q0VF96 1302 aa10.62□□□□□ -0.71
TCF4-203ENST00000398339 MAPK8IP3Q9UPT6 1336 aa10.62□□□□□ -0.71
TCF4-203ENST00000398339 PLXNC1O60486 1568 aa10.61□□□□□ -0.71
TCF4-203ENST00000398339 PDE3AQ14432 1141 aa10.61□□□□□ -0.71
TCF4-203ENST00000398339 POGKQ9P215 609 aa10.61□□□□□ -0.71
TCF4-203ENST00000398339 MADDQ8WXG6 1647 aa10.61□□□□□ -0.71
TCF4-203ENST00000398339 SEC24BO95487 1268 aa10.61□□□□□ -0.71
TCF4-203ENST00000398339 NINLQ9Y2I6 1382 aa10.6□□□□□ -0.71
TCF4-203ENST00000398339 SCAF11Q99590 1463 aaKnown RBP10.6□□□□□ -0.71
TCF4-203ENST00000398339 NGEFQ8N5V2 710 aa10.6□□□□□ -0.71
TCF4-203ENST00000398339 CLUAP1Q96AJ1 413 aa10.6□□□□□ -0.71
TCF4-203ENST00000398339 DUOX2Q9NRD8 1548 aa10.59□□□□□ -0.71
TCF4-203ENST00000398339 NLRP1Q9C000 1473 aa10.59□□□□□ -0.71
TCF4-203ENST00000398339 DMRT2Q9Y5R5 561 aa10.59□□□□□ -0.71
TCF4-203ENST00000398339 ARHGAP5Q13017 1502 aa10.59□□□□□ -0.71
TCF4-203ENST00000398339 SAMD1Q6SPF0 538 aaPredicted RBP10.59□□□□□ -0.71
TCF4-203ENST00000398339 SCAPERQ9BY12 1400 aa10.58□□□□□ -0.72
TCF4-203ENST00000398339 MYOM1P52179 1685 aa10.58□□□□□ -0.72
TCF4-203ENST00000398339 CENPJQ9HC77 1338 aaPredicted RBP10.58□□□□□ -0.72
TCF4-203ENST00000398339 ANTXR1Q9H6X2 564 aa10.58□□□□□ -0.72
TCF4-203ENST00000398339 L1TD1Q5T7N2 865 aaKnown RBP10.57□□□□□ -0.72
TCF4-203ENST00000398339 PANK1Q8TE04 598 aa10.57□□□□□ -0.72
TCF4-203ENST00000398339 NAP1L5Q96NT1 182 aaPredicted RBP10.57□□□□□ -0.72
TCF4-203ENST00000398339 SLKQ9H2G2 1235 aaPredicted RBP10.57□□□□□ -0.72
TCF4-203ENST00000398339 COG6Q9Y2V7 657 aa10.57□□□□□ -0.72
TCF4-203ENST00000398339 TTC37Q6PGP7 1564 aa10.57□□□□□ -0.72
TCF4-203ENST00000398339 CANXP27824 592 aaKnown RBP10.56□□□□□ -0.72
TCF4-203ENST00000398339 STAC3Q96MF2 364 aa10.56□□□□□ -0.72
TCF4-203ENST00000398339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.55□□□□□ -0.72
TCF4-203ENST00000398339 HAP1P54257 671 aaPredicted RBP10.55□□□□□ -0.72
TCF4-203ENST00000398339 NAP1L2Q9ULW6 460 aaPredicted RBP10.55□□□□□ -0.72
TCF4-203ENST00000398339 ZMYM3Q14202 1370 aa10.55□□□□□ -0.72
TCF4-203ENST00000398339 PMFBP1Q8TBY8 1022 aa10.55□□□□□ -0.72
TCF4-203ENST00000398339 TBC1D32Q96NH3 1257 aa10.55□□□□□ -0.72
TCF4-203ENST00000398339 SPHKAPQ2M3C7 1700 aa10.54□□□□□ -0.72
TCF4-203ENST00000398339 WWC1Q8IX03 1113 aa10.54□□□□□ -0.72
TCF4-203ENST00000398339 RRAGDQ9NQL2 400 aaPredicted RBP10.54□□□□□ -0.72
TCF4-203ENST00000398339 KDM5AP29375 1690 aaKnown RBP10.54□□□□□ -0.72
TCF4-203ENST00000398339 UPF2Q9HAU5 1272 aaKnown RBP10.54□□□□□ -0.72
TCF4-203ENST00000398339 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
TCF4-203ENST00000398339 TRPM2O94759 1503 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms