RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SPATA31D1Q6ZQQ2 1576 aa8.01□□□□□ -1.13
PTPRD-206ENST00000397617 KIF3BO15066 747 aa8□□□□□ -1.13
PTPRD-206ENST00000397617 PIK3C2GO75747 1445 aa8□□□□□ -1.13
PTPRD-206ENST00000397617 DLC1Q96QB1 1528 aa8□□□□□ -1.13
PTPRD-206ENST00000397617 TESK2Q96S53 571 aa8□□□□□ -1.13
PTPRD-206ENST00000397617 LRPPRCP42704 1394 aaKnown RBP8□□□□□ -1.13
PTPRD-206ENST00000397617 RIMBP3CA6NJZ7 1639 aa8□□□□□ -1.13
PTPRD-206ENST00000397617 RIMBP3BA6NNM3 1639 aa8□□□□□ -1.13
PTPRD-206ENST00000397617 RIMBP3Q9UFD9 1639 aa8□□□□□ -1.13
PTPRD-206ENST00000397617 ABCA6Q8N139 1617 aa7.99□□□□□ -1.13
PTPRD-206ENST00000397617 TECPR2O15040 1411 aa7.99□□□□□ -1.13
PTPRD-206ENST00000397617 MROH2AA6NES4 1674 aa7.99□□□□□ -1.13
PTPRD-206ENST00000397617 PPRC1Q5VV67 1664 aaKnown RBP7.99□□□□□ -1.13
PTPRD-206ENST00000397617 PLPPR3Q6T4P5 718 aa7.98□□□□□ -1.13
PTPRD-206ENST00000397617 DCAF11Q8TEB1 546 aa7.98□□□□□ -1.13
PTPRD-206ENST00000397617 CLTCL1P53675 1640 aa7.98□□□□□ -1.13
PTPRD-206ENST00000397617 PPLO60437 1756 aa7.98□□□□□ -1.13
PTPRD-206ENST00000397617 NLRP1Q9C000 1473 aa7.98□□□□□ -1.13
PTPRD-206ENST00000397617 USP32Q8NFA0 1604 aa7.98□□□□□ -1.13
PTPRD-206ENST00000397617 CAMSAP1Q5T5Y3 1602 aa7.98□□□□□ -1.13
PTPRD-206ENST00000397617 ADGRB1O14514 1584 aa7.97□□□□□ -1.13
PTPRD-206ENST00000397617 MED14O60244 1454 aa7.97□□□□□ -1.13
PTPRD-206ENST00000397617 ERVK-7P63135 1459 aa7.97□□□□□ -1.13
PTPRD-206ENST00000397617 DDX10Q13206 875 aaKnown RBP7.97□□□□□ -1.13
PTPRD-206ENST00000397617 MYBBP1AQ9BQG0 1328 aaKnown RBP7.97□□□□□ -1.13
PTPRD-206ENST00000397617 ARID3CA6NKF2 412 aa7.97□□□□□ -1.13
PTPRD-206ENST00000397617 C14orf93Q9H972 538 aaKnown RBP7.97□□□□□ -1.13
PTPRD-206ENST00000397617 ATAD2Q6PL18 1390 aa7.96□□□□□ -1.14
PTPRD-206ENST00000397617 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.96□□□□□ -1.14
PTPRD-206ENST00000397617 PIK3R4Q99570 1358 aa7.96□□□□□ -1.14
PTPRD-206ENST00000397617 AAMPQ13685 434 aa7.95□□□□□ -1.14
PTPRD-206ENST00000397617 PER1O15534 1290 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-206ENST00000397617 ABCC11Q96J66 1382 aa7.95□□□□□ -1.14
PTPRD-206ENST00000397617 FAM135BQ49AJ0 1406 aa7.94□□□□□ -1.14
PTPRD-206ENST00000397617 ST20-MTHFSA0A0A6YYL1 179 aa7.94□□□□□ -1.14
PTPRD-206ENST00000397617 NEFLP07196 543 aa7.93□□□□□ -1.14
PTPRD-206ENST00000397617 NEXMIFQ5QGS0 1516 aa7.93□□□□□ -1.14
PTPRD-206ENST00000397617 CENPJQ9HC77 1338 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-206ENST00000397617 PREX1Q8TCU6 1659 aa7.92□□□□□ -1.14
PTPRD-206ENST00000397617 ASXL1Q8IXJ9 1541 aa7.92□□□□□ -1.14
PTPRD-206ENST00000397617 TMEM131LA2VDJ0 1609 aa7.91□□□□□ -1.14
PTPRD-206ENST00000397617 RNF123Q5XPI4 1314 aa7.91□□□□□ -1.14
PTPRD-206ENST00000397617 PNISRQ8TF01 805 aaKnown RBP7.91□□□□□ -1.14
PTPRD-206ENST00000397617 KIF13AQ9H1H9 1805 aa7.91□□□□□ -1.14
PTPRD-206ENST00000397617 POLR3AO14802 1390 aaPredicted RBP7.9□□□□□ -1.14
PTPRD-206ENST00000397617 DIP2AQ14689 1571 aa7.9□□□□□ -1.15
PTPRD-206ENST00000397617 SMG6Q86US8 1419 aaKnown RBP7.89□□□□□ -1.15
PTPRD-206ENST00000397617 PLEKHG2Q9H7P9 1386 aa7.89□□□□□ -1.15
PTPRD-206ENST00000397617 LRRC7Q96NW7 1537 aa7.89□□□□□ -1.15
PTPRD-206ENST00000397617 CLTCQ00610 1675 aaKnown RBP7.89□□□□□ -1.15
PTPRD-206ENST00000397617 MRS2Q9HD23 443 aa7.88□□□□□ -1.15
PTPRD-206ENST00000397617 KNSTRNQ9Y448 316 aa7.88□□□□□ -1.15
PTPRD-206ENST00000397617 EVC2Q86UK5 1308 aa7.88□□□□□ -1.15
PTPRD-206ENST00000397617 BLMP54132 1417 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-206ENST00000397617 FAM69CQ0P6D2 419 aa7.88□□□□□ -1.15
PTPRD-206ENST00000397617 ANKRD36BQ8N2N9 1353 aa7.87□□□□□ -1.15
PTPRD-206ENST00000397617 ARHGAP23Q9P227 1491 aa7.87□□□□□ -1.15
PTPRD-206ENST00000397617 CGNL1Q0VF96 1302 aa7.87□□□□□ -1.15
PTPRD-206ENST00000397617 CT47B1P0C2W7 299 aaPredicted RBP7.87□□□□□ -1.15
PTPRD-206ENST00000397617 ATP7BP35670 1465 aa7.87□□□□□ -1.15
PTPRD-206ENST00000397617 KNDC1Q76NI1 1749 aa7.87□□□□□ -1.15
PTPRD-206ENST00000397617 ZNF428Q96B54 188 aa7.87□□□□□ -1.15
PTPRD-206ENST00000397617 FOXD1Q16676 465 aa7.87□□□□□ -1.15
PTPRD-206ENST00000397617 TMC1Q8TDI8 760 aa7.87□□□□□ -1.15
PTPRD-206ENST00000397617 AMER1Q5JTC6 1135 aaPredicted RBP7.86□□□□□ -1.15
PTPRD-206ENST00000397617 SLIT1O75093 1534 aa7.86□□□□□ -1.15
PTPRD-206ENST00000397617 KIF24Q5T7B8 1368 aa7.86□□□□□ -1.15
PTPRD-206ENST00000397617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.86□□□□□ -1.15
PTPRD-206ENST00000397617 A2ML1A8K2U0 1454 aa7.85□□□□□ -1.15
PTPRD-206ENST00000397617 CYB5RLQ6IPT4 315 aa7.85□□□□□ -1.15
PTPRD-206ENST00000397617 YEATS2Q9ULM3 1422 aa7.85□□□□□ -1.15
PTPRD-206ENST00000397617 ADGRB2O60241 1585 aa7.85□□□□□ -1.15
PTPRD-206ENST00000397617 TERF2IPQ9NYB0 399 aa7.85□□□□□ -1.15
PTPRD-206ENST00000397617 HAP1P54257 671 aaPredicted RBP7.85□□□□□ -1.15
PTPRD-206ENST00000397617 CDC42BPGQ6DT37 1551 aa7.84□□□□□ -1.15
PTPRD-206ENST00000397617 IDI1Q13907 227 aa7.84□□□□□ -1.15
PTPRD-206ENST00000397617 PNNQ9H307 717 aaKnown RBP7.84□□□□□ -1.15
PTPRD-206ENST00000397617 ESF1Q9H501 851 aaKnown RBP7.84□□□□□ -1.15
PTPRD-206ENST00000397617 ARHGEF28Q8N1W1 1705 aaKnown RBP7.84□□□□□ -1.15
PTPRD-206ENST00000397617 C11orf95C9JLR9 678 aaPredicted RBP7.84□□□□□ -1.16
PTPRD-206ENST00000397617 CCDC27Q2M243 656 aa7.84□□□□□ -1.16
PTPRD-206ENST00000397617 PTCH1Q13635 1447 aa7.84□□□□□ -1.16
PTPRD-206ENST00000397617 TBX22Q9Y458 520 aa7.83□□□□□ -1.16
PTPRD-206ENST00000397617 YTHDC2Q9H6S0 1430 aaKnown RBP7.83□□□□□ -1.16
PTPRD-206ENST00000397617 CPS1P31327 1500 aa7.83□□□□□ -1.16
PTPRD-206ENST00000397617 RAPGEF3O95398 923 aa7.83□□□□□ -1.16
PTPRD-206ENST00000397617 ZMYM3Q14202 1370 aa7.83□□□□□ -1.16
PTPRD-206ENST00000397617 TNRQ92752 1358 aa7.83□□□□□ -1.16
PTPRD-206ENST00000397617 TMEM2Q9UHN6 1383 aa7.82□□□□□ -1.16
PTPRD-206ENST00000397617 MYT1LQ9UL68 1186 aa7.82□□□□□ -1.16
PTPRD-206ENST00000397617 MYOM1P52179 1685 aa7.82□□□□□ -1.16
PTPRD-206ENST00000397617 GGT6Q6P531 493 aa7.81□□□□□ -1.16
PTPRD-206ENST00000397617 PLEKHG1Q9ULL1 1385 aa7.81□□□□□ -1.16
PTPRD-206ENST00000397617 CFAP53Q96M91 514 aa7.81□□□□□ -1.16
PTPRD-206ENST00000397617 NUDCQ9Y266 331 aa7.81□□□□□ -1.16
PTPRD-206ENST00000397617 AATKQ6ZMQ8 1374 aa7.81□□□□□ -1.16
PTPRD-206ENST00000397617 NBPF1Q3BBV0 1214 aa7.81□□□□□ -1.16
PTPRD-206ENST00000397617 YTHDC1Q96MU7 727 aaKnown RBP7.81□□□□□ -1.16
PTPRD-206ENST00000397617 PHF23Q9BUL5 403 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-206ENST00000397617 CHMP4AQ9BY43 222 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms