RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 SWT1Q5T5J6 900 aaKnown RBP12.66□□□□□ -0.38
PDZD2-201ENST00000397559 RNF40O75150 1001 aa12.65□□□□□ -0.38
PDZD2-201ENST00000397559 CCDC102AQ96A19 550 aa12.65□□□□□ -0.38
PDZD2-201ENST00000397559 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
PDZD2-201ENST00000397559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.63□□□□□ -0.39
PDZD2-201ENST00000397559 NLRP7Q8WX94 980 aa12.63□□□□□ -0.39
PDZD2-201ENST00000397559 PHOX2BQ99453 314 aa12.63□□□□□ -0.39
PDZD2-201ENST00000397559 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
PDZD2-201ENST00000397559 RB1CC1Q8TDY2 1594 aa12.63□□□□□ -0.39
PDZD2-201ENST00000397559 TMEM134Q9H6X4 195 aa12.62□□□□□ -0.39
PDZD2-201ENST00000397559 WBP1LQ9NX94 342 aa12.59□□□□□ -0.39
PDZD2-201ENST00000397559 TSR3Q9UJK0 312 aaKnown RBP12.59□□□□□ -0.39
PDZD2-201ENST00000397559 SLC4A3P48751 1232 aa12.58□□□□□ -0.4
PDZD2-201ENST00000397559 PPP4CP60510 307 aa12.58□□□□□ -0.4
PDZD2-201ENST00000397559 SLF2Q8IX21 1173 aa12.58□□□□□ -0.4
PDZD2-201ENST00000397559 SLC24A3Q9HC58 644 aa12.55□□□□□ -0.4
PDZD2-201ENST00000397559 MDM2Q00987 491 aaPredicted RBP12.53□□□□□ -0.4
PDZD2-201ENST00000397559 DAXXQ9UER7 740 aaPredicted RBP12.53□□□□□ -0.4
PDZD2-201ENST00000397559 AK7Q96M32 723 aa12.52□□□□□ -0.41
PDZD2-201ENST00000397559 NACADO15069 1562 aa12.5□□□□□ -0.41
PDZD2-201ENST00000397559 DDX11L8A8MPP1 907 aa12.49□□□□□ -0.41
PDZD2-201ENST00000397559 NYAP1Q6ZVC0 841 aa12.49□□□□□ -0.41
PDZD2-201ENST00000397559 NECTIN2Q92692 538 aa12.49□□□□□ -0.41
PDZD2-201ENST00000397559 SLC10A3P09131 477 aa12.48□□□□□ -0.41
PDZD2-201ENST00000397559 RDH13Q8NBN7 331 aa12.48□□□□□ -0.41
PDZD2-201ENST00000397559 TRIM66O15016 1216 aa12.47□□□□□ -0.41
PDZD2-201ENST00000397559 CLCN1P35523 988 aa12.46□□□□□ -0.41
PDZD2-201ENST00000397559 APLP1P51693 650 aa12.46□□□□□ -0.41
PDZD2-201ENST00000397559 TTLL12Q14166 644 aaPredicted RBP12.46□□□□□ -0.41
PDZD2-201ENST00000397559 CFHP08603 1231 aa12.45□□□□□ -0.42
PDZD2-201ENST00000397559 RSPH4AQ5TD94 716 aa12.45□□□□□ -0.42
PDZD2-201ENST00000397559 SULF1Q8IWU6 871 aa12.45□□□□□ -0.42
PDZD2-201ENST00000397559 GPCPD1Q9NPB8 672 aa12.45□□□□□ -0.42
PDZD2-201ENST00000397559 AMHR2Q16671 573 aa12.44□□□□□ -0.42
PDZD2-201ENST00000397559 REPIN1Q9BWE0 567 aaKnown RBP12.43□□□□□ -0.42
PDZD2-201ENST00000397559 KMT5BQ4FZB7 885 aa12.41□□□□□ -0.42
PDZD2-201ENST00000397559 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
PDZD2-201ENST00000397559 PRR14Q9BWN1 585 aa12.4□□□□□ -0.42
PDZD2-201ENST00000397559 PDE4DQ08499 809 aa12.39□□□□□ -0.43
PDZD2-201ENST00000397559 PARP9Q8IXQ6 854 aa12.39□□□□□ -0.43
PDZD2-201ENST00000397559 FAM217BQ9NTX9 383 aaPredicted RBP12.39□□□□□ -0.43
PDZD2-201ENST00000397559 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
PDZD2-201ENST00000397559 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
PDZD2-201ENST00000397559 CD46P15529 392 aa12.37□□□□□ -0.43
PDZD2-201ENST00000397559 ACTN4O43707 911 aaKnown RBP12.36□□□□□ -0.43
PDZD2-201ENST00000397559 SSTR3P32745 418 aaPredicted RBP12.36□□□□□ -0.43
PDZD2-201ENST00000397559 GCGRP47871 477 aa12.36□□□□□ -0.43
PDZD2-201ENST00000397559 PCDHB3Q9Y5E6 796 aa12.36□□□□□ -0.43
PDZD2-201ENST00000397559 COPS2P61201 443 aa12.35□□□□□ -0.43
PDZD2-201ENST00000397559 MTRQ99707 1265 aa12.35□□□□□ -0.43
PDZD2-201ENST00000397559 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
PDZD2-201ENST00000397559 TJAP1Q5JTD0 557 aa12.32□□□□□ -0.44
PDZD2-201ENST00000397559 BLOC1S3Q6QNY0 202 aa12.32□□□□□ -0.44
PDZD2-201ENST00000397559 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
PDZD2-201ENST00000397559 KCNC4Q03721 635 aa12.31□□□□□ -0.44
PDZD2-201ENST00000397559 FUT2Q10981 343 aa12.31□□□□□ -0.44
PDZD2-201ENST00000397559 PUS10Q3MIT2 529 aaKnown RBP12.31□□□□□ -0.44
PDZD2-201ENST00000397559 IL21Q9HBE4 155 aa12.31□□□□□ -0.44
PDZD2-201ENST00000397559 MS4A1P11836 297 aa12.29□□□□□ -0.44
PDZD2-201ENST00000397559 ZNF516Q92618 1163 aa12.29□□□□□ -0.44
PDZD2-201ENST00000397559 UNC13AQ9UPW8 1703 aa12.28□□□□□ -0.44
PDZD2-201ENST00000397559 KDM4AO75164 1064 aa12.27□□□□□ -0.45
PDZD2-201ENST00000397559 GPBP1L1Q9HC44 474 aaPredicted RBP12.27□□□□□ -0.45
PDZD2-201ENST00000397559 ATP6V1AP38606 617 aa12.26□□□□□ -0.45
PDZD2-201ENST00000397559 NUTM1Q86Y26 1132 aa12.26□□□□□ -0.45
PDZD2-201ENST00000397559 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
PDZD2-201ENST00000397559 ZPR1O75312 459 aa12.24□□□□□ -0.45
PDZD2-201ENST00000397559 NR1I2O75469 434 aa12.24□□□□□ -0.45
PDZD2-201ENST00000397559 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
PDZD2-201ENST00000397559 MORN1Q5T089 497 aa12.24□□□□□ -0.45
PDZD2-201ENST00000397559 USP46P62068 366 aa12.22□□□□□ -0.45
PDZD2-201ENST00000397559 IFFO2Q5TF58 517 aa12.22□□□□□ -0.45
PDZD2-201ENST00000397559 SCUBE3Q8IX30 993 aa12.22□□□□□ -0.45
PDZD2-201ENST00000397559 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
PDZD2-201ENST00000397559 KDM4CQ9H3R0 1056 aa12.22□□□□□ -0.45
PDZD2-201ENST00000397559 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
PDZD2-201ENST00000397559 SHROOM4Q9ULL8 1493 aa12.21□□□□□ -0.45
PDZD2-201ENST00000397559 TLL1O43897 1013 aa12.21□□□□□ -0.45
PDZD2-201ENST00000397559 SPIRE2Q8WWL2 714 aa12.21□□□□□ -0.45
PDZD2-201ENST00000397559 HLA-CQ95604 372 aa12.21□□□□□ -0.45
PDZD2-201ENST00000397559 SLC27A5Q9Y2P5 690 aa12.21□□□□□ -0.45
PDZD2-201ENST00000397559 HOXA2O43364 376 aa12.2□□□□□ -0.46
PDZD2-201ENST00000397559 NEUROD2Q15784 382 aa12.2□□□□□ -0.46
PDZD2-201ENST00000397559 GUCA2AQ02747 115 aa12.17□□□□□ -0.46
PDZD2-201ENST00000397559 TBC1D2Q9BYX2 928 aa12.17□□□□□ -0.46
PDZD2-201ENST00000397559 A0A0G2JS52 829 aa12.15□□□□□ -0.46
PDZD2-201ENST00000397559 MOXD2PA6NHM9 499 aa12.14□□□□□ -0.47
PDZD2-201ENST00000397559 NDUFV2P19404 249 aa12.14□□□□□ -0.47
PDZD2-201ENST00000397559 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
PDZD2-201ENST00000397559 SPSB2Q99619 263 aa12.14□□□□□ -0.47
PDZD2-201ENST00000397559 FAM117AQ9C073 453 aa12.14□□□□□ -0.47
PDZD2-201ENST00000397559 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
PDZD2-201ENST00000397559 ADH1BP00325 375 aa12.13□□□□□ -0.47
PDZD2-201ENST00000397559 DIXDC1Q155Q3 683 aa12.13□□□□□ -0.47
PDZD2-201ENST00000397559 RNF19BQ6ZMZ0 732 aa12.13□□□□□ -0.47
PDZD2-201ENST00000397559 FDX1P10109 184 aa12.12□□□□□ -0.47
PDZD2-201ENST00000397559 Q3C1V9 767 aa12.12□□□□□ -0.47
PDZD2-201ENST00000397559 THAP11Q96EK4 314 aa12.12□□□□□ -0.47
PDZD2-201ENST00000397559 BRICD5Q6PL45 260 aa12.11□□□□□ -0.47
PDZD2-201ENST00000397559 PPP1R18Q6NYC8 613 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms