RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 EFCAB2Q5VUJ9 269 aa6.56□□□□□ -1.36
SSR1-202ENST00000397511 CRBNQ96SW2 442 aa6.56□□□□□ -1.36
SSR1-202ENST00000397511 FBXO3Q9UK99 471 aa6.56□□□□□ -1.36
SSR1-202ENST00000397511 LRPPRCP42704 1394 aaKnown RBP6.56□□□□□ -1.36
SSR1-202ENST00000397511 SHANK2Q9UPX8 1470 aa6.56□□□□□ -1.36
SSR1-202ENST00000397511 KDM5DQ9BY66 1539 aa6.56□□□□□ -1.36
SSR1-202ENST00000397511 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.56□□□□□ -1.368e-6■□□□□ 10.5
SSR1-202ENST00000397511 ARHGEF12Q9NZN5 1544 aa6.56□□□□□ -1.36
SSR1-202ENST00000397511 SPAG9O60271 1321 aaKnown RBP6.55□□□□□ -1.36
SSR1-202ENST00000397511 ERBINQ96RT1 1412 aa6.55□□□□□ -1.36
SSR1-202ENST00000397511 TRAPPC8Q9Y2L5 1435 aa6.55□□□□□ -1.36
SSR1-202ENST00000397511 PARD3Q8TEW0 1356 aa6.55□□□□□ -1.36
SSR1-202ENST00000397511 RNF123Q5XPI4 1314 aa6.55□□□□□ -1.36
SSR1-202ENST00000397511 CFAP70Q5T0N1 1121 aa6.55□□□□□ -1.36
SSR1-202ENST00000397511 FRAT1Q92837 279 aaPredicted RBP6.55□□□□□ -1.36
SSR1-202ENST00000397511 DDRGK1Q96HY6 314 aa6.54□□□□□ -1.36
SSR1-202ENST00000397511 CLASP1Q7Z460 1538 aa6.54□□□□□ -1.36
SSR1-202ENST00000397511 SLC4A3P48751 1232 aa6.54□□□□□ -1.36
SSR1-202ENST00000397511 TMEM132AQ24JP5 1023 aa6.54□□□□□ -1.36
SSR1-202ENST00000397511 PREX2Q70Z35 1606 aa6.54□□□□□ -1.36
SSR1-202ENST00000397511 TRPM1Q7Z4N2 1603 aa6.54□□□□□ -1.36
SSR1-202ENST00000397511 TCERG1O14776 1098 aaKnown RBP6.54□□□□□ -1.36
SSR1-202ENST00000397511 PDE4AP27815 886 aa6.54□□□□□ -1.36
SSR1-202ENST00000397511 PPP2R1AP30153 589 aa6.54□□□□□ -1.36
SSR1-202ENST00000397511 SAFB2Q14151 953 aaKnown RBP eCLIP6.53□□□□□ -1.36
SSR1-202ENST00000397511 RGS3P49796 1198 aa6.53□□□□□ -1.36
SSR1-202ENST00000397511 HSP90AA2PQ14568 343 aaPredicted RBP6.53□□□□□ -1.36
SSR1-202ENST00000397511 NFKBIBQ15653 356 aa6.53□□□□□ -1.36
SSR1-202ENST00000397511 GGT6Q6P531 493 aa6.53□□□□□ -1.36
SSR1-202ENST00000397511 ARHGEF5Q12774 1597 aa6.53□□□□□ -1.36
SSR1-202ENST00000397511 APAF1O14727 1248 aa6.52□□□□□ -1.37
SSR1-202ENST00000397511 RRP9O43818 475 aaKnown RBP6.52□□□□□ -1.37
SSR1-202ENST00000397511 TMEM132EQ6IEE7 984 aa6.52□□□□□ -1.37
SSR1-202ENST00000397511 SPINK5Q9NQ38 1064 aaPredicted RBP6.52□□□□□ -1.37
SSR1-202ENST00000397511 TRAK1Q9UPV9 953 aa6.52□□□□□ -1.37
SSR1-202ENST00000397511 RRP7AQ9Y3A4 280 aaKnown RBP6.52□□□□□ -1.37
SSR1-202ENST00000397511 DMRT2Q9Y5R5 561 aa6.52□□□□□ -1.37
SSR1-202ENST00000397511 MAGI2Q86UL8 1455 aa6.51□□□□□ -1.37
SSR1-202ENST00000397511 COL17A1Q9UMD9 1497 aaPredicted RBP6.51□□□□□ -1.37
SSR1-202ENST00000397511 MYO5CQ9NQX4 1742 aa6.51□□□□□ -1.37
SSR1-202ENST00000397511 ADGRF5Q8IZF2 1346 aa6.51□□□□□ -1.37
SSR1-202ENST00000397511 CFAP65Q6ZU64 1925 aaKnown RBP6.51□□□□□ -1.37
SSR1-202ENST00000397511 SCAPERQ9BY12 1400 aa6.51□□□□□ -1.37
SSR1-202ENST00000397511 BCAR3O75815 825 aa6.51□□□□□ -1.37
SSR1-202ENST00000397511 PLEKHH1Q9ULM0 1364 aa6.51□□□□□ -1.37
SSR1-202ENST00000397511 HSP90AA1P07900 732 aaKnown RBP6.5□□□□□ -1.37
SSR1-202ENST00000397511 UHRF1BP1LA0JNW5 1464 aa6.5□□□□□ -1.37
SSR1-202ENST00000397511 UGGT1Q9NYU2 1555 aa6.5□□□□□ -1.37
SSR1-202ENST00000397511 MS4A1P11836 297 aa6.5□□□□□ -1.37
SSR1-202ENST00000397511 PDE3BQ13370 1112 aa6.5□□□□□ -1.37
SSR1-202ENST00000397511 GOLGA2Q08379 1002 aa6.5□□□□□ -1.37
SSR1-202ENST00000397511 BACH2Q9BYV9 841 aa6.5□□□□□ -1.37
SSR1-202ENST00000397511 PLCH2O75038 1416 aa6.49□□□□□ -1.37
SSR1-202ENST00000397511 E9PCH4 1651 aa6.49□□□□□ -1.37
SSR1-202ENST00000397511 DUSP27Q5VZP5 1158 aa6.49□□□□□ -1.37
SSR1-202ENST00000397511 BCL2L13Q9BXK5 485 aa6.49□□□□□ -1.37
SSR1-202ENST00000397511 GPRASP1Q5JY77 1395 aa6.49□□□□□ -1.37
SSR1-202ENST00000397511 ABCC2Q92887 1545 aa6.49□□□□□ -1.37
SSR1-202ENST00000397511 NAP1L5Q96NT1 182 aaPredicted RBP6.49□□□□□ -1.37
SSR1-202ENST00000397511 PRDM15P57071 1507 aaPredicted RBP6.49□□□□□ -1.37
SSR1-202ENST00000397511 DUOX2Q9NRD8 1548 aa6.49□□□□□ -1.37
SSR1-202ENST00000397511 CANXP27824 592 aaKnown RBP6.48□□□□□ -1.37
SSR1-202ENST00000397511 CARD14Q9BXL6 1004 aa6.48□□□□□ -1.37
SSR1-202ENST00000397511 SLC12A5Q9H2X9 1139 aa6.48□□□□□ -1.37
SSR1-202ENST00000397511 WDR7Q9Y4E6 1490 aa6.48□□□□□ -1.37
SSR1-202ENST00000397511 MAST1Q9Y2H9 1570 aa6.47□□□□□ -1.37
SSR1-202ENST00000397511 UNC13BO14795 1591 aa6.47□□□□□ -1.37
SSR1-202ENST00000397511 ZCCHC11Q5TAX3 1644 aaKnown RBP6.47□□□□□ -1.37
SSR1-202ENST00000397511 ATP10AO60312 1499 aa6.47□□□□□ -1.37
SSR1-202ENST00000397511 CLUAP1Q96AJ1 413 aa6.47□□□□□ -1.37
SSR1-202ENST00000397511 STK26Q9P289 416 aa6.47□□□□□ -1.37
SSR1-202ENST00000397511 IQGAP3Q86VI3 1631 aa6.47□□□□□ -1.37
SSR1-202ENST00000397511 CDCA8Q53HL2 280 aa6.46□□□□□ -1.37
SSR1-202ENST00000397511 PNNQ9H307 717 aaKnown RBP6.46□□□□□ -1.37
SSR1-202ENST00000397511 KANK1Q14678 1352 aa6.46□□□□□ -1.37
SSR1-202ENST00000397511 PANK1Q8TE04 598 aa6.46□□□□□ -1.38
SSR1-202ENST00000397511 RRAGDQ9NQL2 400 aaPredicted RBP6.46□□□□□ -1.38
SSR1-202ENST00000397511 COG6Q9Y2V7 657 aa6.46□□□□□ -1.38
SSR1-202ENST00000397511 L1TD1Q5T7N2 865 aaKnown RBP6.46□□□□□ -1.38
SSR1-202ENST00000397511 BLMP54132 1417 aaPredicted RBP6.46□□□□□ -1.38
SSR1-202ENST00000397511 FANCAO15360 1455 aa6.46□□□□□ -1.38
SSR1-202ENST00000397511 RAPGEF3O95398 923 aa6.45□□□□□ -1.38
SSR1-202ENST00000397511 SLFN5Q08AF3 891 aa6.45□□□□□ -1.38
SSR1-202ENST00000397511 C14orf37Q86TY3 774 aa6.45□□□□□ -1.38
SSR1-202ENST00000397511 MORC1Q86VD1 984 aa6.45□□□□□ -1.38
SSR1-202ENST00000397511 TNNQ9UQP3 1299 aa6.45□□□□□ -1.38
SSR1-202ENST00000397511 SCAF11Q99590 1463 aaKnown RBP6.45□□□□□ -1.38
SSR1-202ENST00000397511 ABCC1P33527 1531 aa6.45□□□□□ -1.38
SSR1-202ENST00000397511 CLTCL1P53675 1640 aa6.44□□□□□ -1.38
SSR1-202ENST00000397511 PLXNC1O60486 1568 aa6.44□□□□□ -1.38
SSR1-202ENST00000397511 ZMYM4Q5VZL5 1548 aa6.44□□□□□ -1.38
SSR1-202ENST00000397511 ADGRL1O94910 1474 aa6.44□□□□□ -1.38
SSR1-202ENST00000397511 EIF2AK4Q9P2K8 1649 aaKnown RBP6.44□□□□□ -1.38
SSR1-202ENST00000397511 A0A0U1RQG5 324 aaPredicted RBP6.44□□□□□ -1.38
SSR1-202ENST00000397511 IGHDP01880 384 aa6.44□□□□□ -1.38
SSR1-202ENST00000397511 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.44□□□□□ -1.38
SSR1-202ENST00000397511 CABP2Q9NPB3 220 aa6.44□□□□□ -1.38
SSR1-202ENST00000397511 ARAP3Q8WWN8 1544 aa6.44□□□□□ -1.38
SSR1-202ENST00000397511 MADDQ8WXG6 1647 aa6.43□□□□□ -1.38
SSR1-202ENST00000397511 FRAT2O75474 233 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms