RNA–Protein interactions for RNA: ENST00000397176.6

PRKCQ-202, Transcript of protein kinase C theta, humanhuman

TSL 5 BASIC

Gene PRKCQ, Length 3,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-202ENST00000397176 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.13
PRKCQ-202ENST00000397176 TDRD9Q8NDG6 1382 aaKnown RBP14.27□□□□□ -0.13
PRKCQ-202ENST00000397176 EPRSP07814 1512 aaKnown RBP14.27□□□□□ -0.13
PRKCQ-202ENST00000397176 NKTRP30414 1462 aaKnown RBP14.26□□□□□ -0.13
PRKCQ-202ENST00000397176 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
PRKCQ-202ENST00000397176 HSP90AB1P08238 724 aaKnown RBP14.26□□□□□ -0.13
PRKCQ-202ENST00000397176 GBP4Q96PP9 640 aa14.26□□□□□ -0.13
PRKCQ-202ENST00000397176 CFDP1Q9UEE9 299 aaPredicted RBP14.26□□□□□ -0.13
PRKCQ-202ENST00000397176 PDE3AQ14432 1141 aa14.26□□□□□ -0.13
PRKCQ-202ENST00000397176 PMFBP1Q8TBY8 1022 aa14.26□□□□□ -0.13
PRKCQ-202ENST00000397176 KIAA0586Q9BVV6 1533 aa14.25□□□□□ -0.13
PRKCQ-202ENST00000397176 E9PCH4 1651 aa14.25□□□□□ -0.13
PRKCQ-202ENST00000397176 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
PRKCQ-202ENST00000397176 ZNF692Q9BU19 519 aaPredicted RBP14.25□□□□□ -0.13
PRKCQ-202ENST00000397176 RLBP1P12271 317 aa14.25□□□□□ -0.13
PRKCQ-202ENST00000397176 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
PRKCQ-202ENST00000397176 VIRMAQ69YN4 1812 aaKnown RBP14.24□□□□□ -0.13
PRKCQ-202ENST00000397176 CAMSAP2Q08AD1 1489 aa14.24□□□□□ -0.13
PRKCQ-202ENST00000397176 E9PSI1 815 aa14.24□□□□□ -0.13
PRKCQ-202ENST00000397176 MAP7D2Q96T17 732 aa14.24□□□□□ -0.13
PRKCQ-202ENST00000397176 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
PRKCQ-202ENST00000397176 TMF1P82094 1093 aa14.23□□□□□ -0.13
PRKCQ-202ENST00000397176 INSRP06213 1382 aa14.23□□□□□ -0.13
PRKCQ-202ENST00000397176 TESK2Q96S53 571 aa14.23□□□□□ -0.13
PRKCQ-202ENST00000397176 TRMT2AQ8IZ69 625 aaKnown RBP14.22□□□□□ -0.13
PRKCQ-202ENST00000397176 DDX49Q9Y6V7 483 aaKnown RBP14.22□□□□□ -0.13
PRKCQ-202ENST00000397176 SMAP1Q8IYB5 467 aaPredicted RBP14.21□□□□□ -0.13
PRKCQ-202ENST00000397176 RRP7AQ9Y3A4 280 aaKnown RBP14.21□□□□□ -0.13
PRKCQ-202ENST00000397176 KIF21AQ7Z4S6 1674 aa14.21□□□□□ -0.13
PRKCQ-202ENST00000397176 PPP1R9BQ96SB3 815 aa14.21□□□□□ -0.13
PRKCQ-202ENST00000397176 RWDD1Q9H446 243 aaPredicted RBP14.21□□□□□ -0.13
PRKCQ-202ENST00000397176 POLA1P09884 1462 aaPredicted RBP14.21□□□□□ -0.14
PRKCQ-202ENST00000397176 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
PRKCQ-202ENST00000397176 SKOR2Q2VWA4 1001 aaPredicted RBP14.2□□□□□ -0.14
PRKCQ-202ENST00000397176 DNMT1P26358 1616 aaKnown RBP14.2□□□□□ -0.14
PRKCQ-202ENST00000397176 NESP48681 1621 aa14.2□□□□□ -0.14
PRKCQ-202ENST00000397176 PDE4CQ08493 712 aa14.2□□□□□ -0.14
PRKCQ-202ENST00000397176 SSFA2P28290 1259 aa14.19□□□□□ -0.14
PRKCQ-202ENST00000397176 JARID2Q92833 1246 aaPredicted RBP14.18□□□□□ -0.14
PRKCQ-202ENST00000397176 ANKRD50Q9ULJ7 1429 aa14.18□□□□□ -0.14
PRKCQ-202ENST00000397176 BBXQ8WY36 941 aaPredicted RBP14.18□□□□□ -0.14
PRKCQ-202ENST00000397176 CUL7Q14999 1698 aa14.18□□□□□ -0.14
PRKCQ-202ENST00000397176 RAB3GAP1Q15042 981 aa14.17□□□□□ -0.14
PRKCQ-202ENST00000397176 ERBINQ96RT1 1412 aa14.17□□□□□ -0.14
PRKCQ-202ENST00000397176 TSC1Q92574 1164 aa14.17□□□□□ -0.14
PRKCQ-202ENST00000397176 CC2D2AQ9P2K1 1620 aa14.16□□□□□ -0.14
PRKCQ-202ENST00000397176 COL17A1Q9UMD9 1497 aaPredicted RBP14.16□□□□□ -0.14
PRKCQ-202ENST00000397176 RTEL1-TNFRSF6BF6WH68 1400 aa14.16□□□□□ -0.14
PRKCQ-202ENST00000397176 GOLGA6L22H0YM25 854 aa14.16□□□□□ -0.14
PRKCQ-202ENST00000397176 CAVIN1Q6NZI2 390 aaKnown RBP14.16□□□□□ -0.14
PRKCQ-202ENST00000397176 FANCD2Q9BXW9 1451 aa14.16□□□□□ -0.14
PRKCQ-202ENST00000397176 ANKRD30AQ9BXX3 1397 aa14.16□□□□□ -0.14
PRKCQ-202ENST00000397176 CD2BP2O95400 341 aaKnown RBP14.15□□□□□ -0.14
PRKCQ-202ENST00000397176 TERF1P54274 439 aa14.15□□□□□ -0.14
PRKCQ-202ENST00000397176 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
PRKCQ-202ENST00000397176 DDIT3P35638 169 aa14.15□□□□□ -0.14
PRKCQ-202ENST00000397176 RARSP54136 660 aaKnown RBP14.15□□□□□ -0.14
PRKCQ-202ENST00000397176 CBX1P83916 185 aa14.15□□□□□ -0.14
PRKCQ-202ENST00000397176 ARHGEF12Q9NZN5 1544 aa14.14□□□□□ -0.15
PRKCQ-202ENST00000397176 DNTTIP2Q5QJE6 756 aaKnown RBP14.14□□□□□ -0.15
PRKCQ-202ENST00000397176 WWC1Q8IX03 1113 aa14.14□□□□□ -0.15
PRKCQ-202ENST00000397176 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
PRKCQ-202ENST00000397176 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.14□□□□□ -0.15
PRKCQ-202ENST00000397176 NOL7Q9UMY1 257 aaKnown RBP14.14□□□□□ -0.15
PRKCQ-202ENST00000397176 DYNC1I1O14576 645 aa14.13□□□□□ -0.15
PRKCQ-202ENST00000397176 MPNDQ8N594 471 aa14.13□□□□□ -0.15
PRKCQ-202ENST00000397176 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
PRKCQ-202ENST00000397176 SMC5Q8IY18 1101 aa14.13□□□□□ -0.15
PRKCQ-202ENST00000397176 FTSJ3Q8IY81 847 aaKnown RBP14.13□□□□□ -0.15
PRKCQ-202ENST00000397176 RBSNQ9H1K0 784 aa14.13□□□□□ -0.15
PRKCQ-202ENST00000397176 GAPVD1Q14C86 1478 aa14.13□□□□□ -0.15
PRKCQ-202ENST00000397176 PRAG1Q86YV5 1406 aa14.13□□□□□ -0.15
PRKCQ-202ENST00000397176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.13□□□□□ -0.15
PRKCQ-202ENST00000397176 DMTNQ08495 405 aa14.12□□□□□ -0.15
PRKCQ-202ENST00000397176 FAM177BA6PVY3 158 aa14.12□□□□□ -0.15
PRKCQ-202ENST00000397176 MAGI2Q86UL8 1455 aa14.12□□□□□ -0.15
PRKCQ-202ENST00000397176 MTERF4Q7Z6M4 381 aaKnown RBP14.11□□□□□ -0.15
PRKCQ-202ENST00000397176 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
PRKCQ-202ENST00000397176 ZSCAN20P17040 1043 aaPredicted RBP14.11□□□□□ -0.15
PRKCQ-202ENST00000397176 TNNT2P45379 298 aaPredicted RBP14.11□□□□□ -0.15
PRKCQ-202ENST00000397176 CCDC94Q9BW85 323 aaPredicted RBP14.11□□□□□ -0.15
PRKCQ-202ENST00000397176 ZNF500O60304 480 aaPredicted RBP14.11□□□□□ -0.15
PRKCQ-202ENST00000397176 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
PRKCQ-202ENST00000397176 KLHL40Q2TBA0 621 aa14.11□□□□□ -0.15
PRKCQ-202ENST00000397176 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
PRKCQ-202ENST00000397176 BAG4O95429 457 aaKnown RBP14.1□□□□□ -0.15
PRKCQ-202ENST00000397176 PRIM1P49642 420 aaKnown RBP14.1□□□□□ -0.15
PRKCQ-202ENST00000397176 RBM27Q9P2N5 1060 aaKnown RBP14.1□□□□□ -0.15
PRKCQ-202ENST00000397176 ZSCAN23Q3MJ62 389 aa14.1□□□□□ -0.15
PRKCQ-202ENST00000397176 SASS6Q6UVJ0 657 aa14.1□□□□□ -0.15
PRKCQ-202ENST00000397176 RNF214Q8ND24 703 aa14.1□□□□□ -0.15
PRKCQ-202ENST00000397176 GAS2L2Q8NHY3 880 aa14.1□□□□□ -0.15
PRKCQ-202ENST00000397176 BCL11BQ9C0K0 894 aaPredicted RBP14.1□□□□□ -0.15
PRKCQ-202ENST00000397176 ZKSCAN5Q9Y2L8 839 aa14.1□□□□□ -0.15
PRKCQ-202ENST00000397176 IGSF3O75054 1194 aa14.09□□□□□ -0.15
PRKCQ-202ENST00000397176 PTMSP20962 102 aa14.09□□□□□ -0.15
PRKCQ-202ENST00000397176 NINLQ9Y2I6 1382 aa14.09□□□□□ -0.15
PRKCQ-202ENST00000397176 PTMAP06454 111 aaKnown RBP14.09□□□□□ -0.15
PRKCQ-202ENST00000397176 LNPKQ9C0E8 428 aa14.09□□□□□ -0.15
PRKCQ-202ENST00000397176 CCDC144AA2RUR9 1427 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms