RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 IQGAP1P46940 1657 aa23.76■■□□□ 1.39
SCNN1A-205ENST00000396966 CLTCQ00610 1675 aaKnown RBP23.76■■□□□ 1.39
SCNN1A-205ENST00000396966 CCER2I3L3R5 266 aa23.74■■□□□ 1.39
SCNN1A-205ENST00000396966 POLR3GLQ9BT43 218 aa23.71■■□□□ 1.39
SCNN1A-205ENST00000396966 RPGRIP1LQ68CZ1 1315 aa23.7■■□□□ 1.38
SCNN1A-205ENST00000396966 SUPT16HQ9Y5B9 1047 aaKnown RBP23.7■■□□□ 1.38
SCNN1A-205ENST00000396966 SLC52A1Q9NWF4 448 aa23.69■■□□□ 1.38
SCNN1A-205ENST00000396966 NRXN1Q9ULB1 1477 aa23.69■■□□□ 1.38
SCNN1A-205ENST00000396966 ADGRF5Q8IZF2 1346 aa23.67■■□□□ 1.38
SCNN1A-205ENST00000396966 MYO5BQ9ULV0 1848 aa23.67■■□□□ 1.38
SCNN1A-205ENST00000396966 SCAF11Q99590 1463 aaKnown RBP23.66■■□□□ 1.38
SCNN1A-205ENST00000396966 ERVK-7P63135 1459 aa23.65■■□□□ 1.38
SCNN1A-205ENST00000396966 MLECQ14165 292 aa23.64■■□□□ 1.38
SCNN1A-205ENST00000396966 TRHP20396 242 aaPredicted RBP23.64■■□□□ 1.37
SCNN1A-205ENST00000396966 IDI1Q13907 227 aa23.63■■□□□ 1.37
SCNN1A-205ENST00000396966 TMEM131LA2VDJ0 1609 aa23.62■■□□□ 1.37
SCNN1A-205ENST00000396966 EIF3AQ14152 1382 aaKnown RBP23.62■■□□□ 1.37
SCNN1A-205ENST00000396966 NEXMIFQ5QGS0 1516 aa23.62■■□□□ 1.37
SCNN1A-205ENST00000396966 SETBP1Q9Y6X0 1596 aa23.61■■□□□ 1.37
SCNN1A-205ENST00000396966 CFAP70Q5T0N1 1121 aa23.61■■□□□ 1.37
SCNN1A-205ENST00000396966 TESK2Q96S53 571 aa23.61■■□□□ 1.37
SCNN1A-205ENST00000396966 ESF1Q9H501 851 aaKnown RBP23.61■■□□□ 1.37
SCNN1A-205ENST00000396966 TMF1P82094 1093 aa23.6■■□□□ 1.37
SCNN1A-205ENST00000396966 PIK3C2GO75747 1445 aa23.6■■□□□ 1.37
SCNN1A-205ENST00000396966 SPATA31D1Q6ZQQ2 1576 aa23.6■■□□□ 1.37
SCNN1A-205ENST00000396966 FBXO31Q5XUX0 539 aaPredicted RBP23.59■■□□□ 1.37
SCNN1A-205ENST00000396966 VGFO15240 615 aaPredicted RBP23.58■■□□□ 1.36
SCNN1A-205ENST00000396966 PRKRIP1Q9H875 184 aaPredicted RBP23.57■■□□□ 1.36
SCNN1A-205ENST00000396966 DISP3Q9P2K9 1392 aa23.55■■□□□ 1.36
SCNN1A-205ENST00000396966 C14orf93Q9H972 538 aaKnown RBP23.54■■□□□ 1.36
SCNN1A-205ENST00000396966 MYO3AQ8NEV4 1616 aa23.53■■□□□ 1.36
SCNN1A-205ENST00000396966 ZFYVE9O95405 1425 aa23.53■■□□□ 1.36
SCNN1A-205ENST00000396966 SLC24A1O60721 1099 aa23.51■■□□□ 1.35
SCNN1A-205ENST00000396966 ZMYM3Q14202 1370 aa23.51■■□□□ 1.35
SCNN1A-205ENST00000396966 STAG3Q9UJ98 1225 aa23.5■■□□□ 1.35
SCNN1A-205ENST00000396966 CDCA8Q53HL2 280 aa23.5■■□□□ 1.35
SCNN1A-205ENST00000396966 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
SCNN1A-205ENST00000396966 DNAJC5Q9H3Z4 198 aa23.48■■□□□ 1.35
SCNN1A-205ENST00000396966 KDM5AP29375 1690 aaKnown RBP23.48■■□□□ 1.35
SCNN1A-205ENST00000396966 NUTM2DQ5VT03 806 aaPredicted RBP23.47■■□□□ 1.35
SCNN1A-205ENST00000396966 QRICH2Q9H0J4 1663 aa23.43■■□□□ 1.34
SCNN1A-205ENST00000396966 A2ML1A8K2U0 1454 aa23.43■■□□□ 1.34
SCNN1A-205ENST00000396966 KTN1Q86UP2 1357 aaKnown RBP23.42■■□□□ 1.34
SCNN1A-205ENST00000396966 SBNO2Q9Y2G9 1366 aa23.41■■□□□ 1.34
SCNN1A-205ENST00000396966 FER1L4A9Z1Z3 1794 aa23.41■■□□□ 1.34
SCNN1A-205ENST00000396966 ARHGEF28Q8N1W1 1705 aaKnown RBP23.41■■□□□ 1.34
SCNN1A-205ENST00000396966 FKBP8Q14318 412 aa23.41■■□□□ 1.34
SCNN1A-205ENST00000396966 CENPJQ9HC77 1338 aaPredicted RBP23.4■■□□□ 1.34
SCNN1A-205ENST00000396966 TMEM132EQ6IEE7 984 aa23.4■■□□□ 1.34
SCNN1A-205ENST00000396966 TRAK1Q9UPV9 953 aa23.4■■□□□ 1.34
SCNN1A-205ENST00000396966 MYOM1P52179 1685 aa23.39■■□□□ 1.33
SCNN1A-205ENST00000396966 BCANQ96GW7 911 aa23.38■■□□□ 1.33
SCNN1A-205ENST00000396966 MRS2Q9HD23 443 aa23.38■■□□□ 1.33
SCNN1A-205ENST00000396966 TNRQ92752 1358 aa23.38■■□□□ 1.33
SCNN1A-205ENST00000396966 CNGB1Q14028 1251 aaPredicted RBP23.38■■□□□ 1.33
SCNN1A-205ENST00000396966 PANK3Q9H999 370 aa23.37■■□□□ 1.33
SCNN1A-205ENST00000396966 RALBP1Q15311 655 aa23.36■■□□□ 1.33
SCNN1A-205ENST00000396966 PER1O15534 1290 aaPredicted RBP23.36■■□□□ 1.33
SCNN1A-205ENST00000396966 CCDC184Q52MB2 194 aa23.36■■□□□ 1.33
SCNN1A-205ENST00000396966 RIMS2Q9UQ26 1411 aa23.36■■□□□ 1.33
SCNN1A-205ENST00000396966 C3P01024 1663 aa23.36■■□□□ 1.33
SCNN1A-205ENST00000396966 ALKQ9UM73 1620 aa23.35■■□□□ 1.33
SCNN1A-205ENST00000396966 UBR1Q8IWV7 1749 aa23.34■■□□□ 1.33
SCNN1A-205ENST00000396966 ASXL1Q8IXJ9 1541 aa23.33■■□□□ 1.33
SCNN1A-205ENST00000396966 HNRNPUQ00839 825 aaKnown RBP eCLIP23.32■■□□□ 1.32
SCNN1A-205ENST00000396966 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.31■■□□□ 1.32
SCNN1A-205ENST00000396966 MYBBP1AQ9BQG0 1328 aaKnown RBP23.3■■□□□ 1.32
SCNN1A-205ENST00000396966 NEFLP07196 543 aa23.3■■□□□ 1.32
SCNN1A-205ENST00000396966 HDGFP51858 240 aaKnown RBP23.3■■□□□ 1.32
SCNN1A-205ENST00000396966 NLRP1Q9C000 1473 aa23.28■■□□□ 1.32
SCNN1A-205ENST00000396966 PARD3Q8TEW0 1356 aa23.28■■□□□ 1.32
SCNN1A-205ENST00000396966 SETD1AO15047 1707 aaKnown RBP23.28■■□□□ 1.32
SCNN1A-205ENST00000396966 FAM9BQ8IZU0 186 aa23.27■■□□□ 1.32
SCNN1A-205ENST00000396966 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
SCNN1A-205ENST00000396966 YTHDC2Q9H6S0 1430 aaKnown RBP23.26■■□□□ 1.31
SCNN1A-205ENST00000396966 KNSTRNQ9Y448 316 aa23.26■■□□□ 1.31
SCNN1A-205ENST00000396966 BRD4O60885 1362 aaPredicted RBP23.24■■□□□ 1.31
SCNN1A-205ENST00000396966 TMC1Q8TDI8 760 aa23.24■■□□□ 1.31
SCNN1A-205ENST00000396966 STK26Q9P289 416 aa23.24■■□□□ 1.31
SCNN1A-205ENST00000396966 NRXN3Q9Y4C0 1643 aa23.23■■□□□ 1.31
SCNN1A-205ENST00000396966 CEBPAP49715 358 aaPredicted RBP23.23■■□□□ 1.31
SCNN1A-205ENST00000396966 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
SCNN1A-205ENST00000396966 EVC2Q86UK5 1308 aa23.22■■□□□ 1.31
SCNN1A-205ENST00000396966 PTPRMP28827 1452 aa23.22■■□□□ 1.31
SCNN1A-205ENST00000396966 TMEM2Q9UHN6 1383 aa23.21■■□□□ 1.31
SCNN1A-205ENST00000396966 PUS7Q96PZ0 661 aaKnown RBP23.21■■□□□ 1.31
SCNN1A-205ENST00000396966 NLRP13Q86W25 1043 aa23.2■■□□□ 1.3
SCNN1A-205ENST00000396966 TULP4Q9NRJ4 1543 aa23.19■■□□□ 1.3
SCNN1A-205ENST00000396966 TSHZ2Q9NRE2 1034 aa23.19■■□□□ 1.3
SCNN1A-205ENST00000396966 DLC1Q96QB1 1528 aa23.19■■□□□ 1.3
SCNN1A-205ENST00000396966 RIMS1Q86UR5 1692 aaKnown RBP23.18■■□□□ 1.3
SCNN1A-205ENST00000396966 POGKQ9P215 609 aa23.17■■□□□ 1.3
SCNN1A-205ENST00000396966 NPC1L1Q9UHC9 1359 aa23.16■■□□□ 1.3
SCNN1A-205ENST00000396966 LRPPRCP42704 1394 aaKnown RBP23.16■■□□□ 1.3
SCNN1A-205ENST00000396966 SAFB2Q14151 953 aaKnown RBP eCLIP23.15■■□□□ 1.3
SCNN1A-205ENST00000396966 AMER1Q5JTC6 1135 aaPredicted RBP23.15■■□□□ 1.3
SCNN1A-205ENST00000396966 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
SCNN1A-205ENST00000396966 PRAM1Q96QH2 718 aa23.15■■□□□ 1.3
SCNN1A-205ENST00000396966 KNDC1Q76NI1 1749 aa23.14■■□□□ 1.3
SCNN1A-205ENST00000396966 PNISRQ8TF01 805 aaKnown RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms