RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 LRP6O75581 1613 aa18.49■□□□□ 0.55
GAPDH-202ENST00000396856 PIK3C2BO00750 1634 aa18.49■□□□□ 0.55
GAPDH-202ENST00000396856 RPRD2Q5VT52 1461 aaKnown RBP18.48■□□□□ 0.55
GAPDH-202ENST00000396856 STAG3Q9UJ98 1225 aa18.48■□□□□ 0.55
GAPDH-202ENST00000396856 PHLPP1O60346 1717 aa18.47■□□□□ 0.55
GAPDH-202ENST00000396856 IDI1Q13907 227 aa18.47■□□□□ 0.55
GAPDH-202ENST00000396856 NOS1P29475 1434 aa18.47■□□□□ 0.55
GAPDH-202ENST00000396856 COL16A1Q07092 1604 aaPredicted RBP18.46■□□□□ 0.55
GAPDH-202ENST00000396856 KDM5AP29375 1690 aaKnown RBP18.46■□□□□ 0.55
GAPDH-202ENST00000396856 NWD1Q149M9 1564 aa18.46■□□□□ 0.55
GAPDH-202ENST00000396856 ZNF772Q68DY9 489 aaPredicted RBP18.45■□□□□ 0.54
GAPDH-202ENST00000396856 SLC52A1Q9NWF4 448 aa18.45■□□□□ 0.54
GAPDH-202ENST00000396856 NKTRP30414 1462 aaKnown RBP18.45■□□□□ 0.54
GAPDH-202ENST00000396856 UNC13BO14795 1591 aa18.44■□□□□ 0.54
GAPDH-202ENST00000396856 PPARGC1BQ86YN6 1023 aaKnown RBP18.44■□□□□ 0.54
GAPDH-202ENST00000396856 TRIM52Q96A61 297 aa18.44■□□□□ 0.54
GAPDH-202ENST00000396856 SPATA31A6Q5VVP1 1343 aa18.44■□□□□ 0.54
GAPDH-202ENST00000396856 MSH6P52701 1360 aa18.43■□□□□ 0.54
GAPDH-202ENST00000396856 ITGAEP38570 1179 aa18.41■□□□□ 0.54
GAPDH-202ENST00000396856 ADGRB3O60242 1522 aa18.4■□□□□ 0.54
GAPDH-202ENST00000396856 RXRBP28702 533 aa18.39■□□□□ 0.53
GAPDH-202ENST00000396856 CDK12Q9NYV4 1490 aaPredicted RBP18.39■□□□□ 0.53
GAPDH-202ENST00000396856 GCC2Q8IWJ2 1684 aa18.38■□□□□ 0.53
GAPDH-202ENST00000396856 RRBP1Q9P2E9 1410 aaKnown RBP18.38■□□□□ 0.53
GAPDH-202ENST00000396856 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
GAPDH-202ENST00000396856 CHD2O14647 1828 aaKnown RBP18.35■□□□□ 0.53
GAPDH-202ENST00000396856 NCOA3Q9Y6Q9 1424 aa18.35■□□□□ 0.53
GAPDH-202ENST00000396856 NUP155O75694 1391 aa18.35■□□□□ 0.53
GAPDH-202ENST00000396856 MEX3CQ5U5Q3 659 aaKnown RBP18.34■□□□□ 0.53
GAPDH-202ENST00000396856 SHPRHQ149N8 1683 aa18.34■□□□□ 0.53
GAPDH-202ENST00000396856 AHDC1Q5TGY3 1603 aaPredicted RBP18.34■□□□□ 0.53
GAPDH-202ENST00000396856 HDGFP51858 240 aaKnown RBP18.33■□□□□ 0.52
GAPDH-202ENST00000396856 E9PCH4 1651 aa18.32■□□□□ 0.52
GAPDH-202ENST00000396856 ZFYVE9O95405 1425 aa18.32■□□□□ 0.52
GAPDH-202ENST00000396856 DIP2AQ14689 1571 aa18.31■□□□□ 0.52
GAPDH-202ENST00000396856 PLEKHG1Q9ULL1 1385 aa18.3■□□□□ 0.52
GAPDH-202ENST00000396856 TBX22Q9Y458 520 aa18.3■□□□□ 0.52
GAPDH-202ENST00000396856 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
GAPDH-202ENST00000396856 TMEM131LA2VDJ0 1609 aa18.29■□□□□ 0.52
GAPDH-202ENST00000396856 AFF2P51816 1311 aa18.27■□□□□ 0.52
GAPDH-202ENST00000396856 RIMS2Q9UQ26 1411 aa18.27■□□□□ 0.52
GAPDH-202ENST00000396856 PPP1R15AO75807 674 aaPredicted RBP18.27■□□□□ 0.52
GAPDH-202ENST00000396856 CADPS2Q86UW7 1296 aa18.27■□□□□ 0.52
GAPDH-202ENST00000396856 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.27■□□□□ 0.52
GAPDH-202ENST00000396856 BCANQ96GW7 911 aa18.27■□□□□ 0.52
GAPDH-202ENST00000396856 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.26■□□□□ 0.51
GAPDH-202ENST00000396856 CHGAP10645 457 aaKnown RBP18.26■□□□□ 0.51
GAPDH-202ENST00000396856 BRINP3Q76B58 766 aa18.26■□□□□ 0.51
GAPDH-202ENST00000396856 RGS12O14924 1447 aa18.25■□□□□ 0.51
GAPDH-202ENST00000396856 NAIPQ13075 1403 aa18.25■□□□□ 0.51
GAPDH-202ENST00000396856 NUTM2BA6NNL0 878 aaPredicted RBP18.24■□□□□ 0.51
GAPDH-202ENST00000396856 NUTM2EB1AL46 878 aaPredicted RBP18.24■□□□□ 0.51
GAPDH-202ENST00000396856 NUTM2AQ8IVF1 878 aaPredicted RBP18.24■□□□□ 0.51
GAPDH-202ENST00000396856 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
GAPDH-202ENST00000396856 QTRT2Q9H974 415 aaKnown RBP18.23■□□□□ 0.51
GAPDH-202ENST00000396856 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
GAPDH-202ENST00000396856 MYO5BQ9ULV0 1848 aa18.22■□□□□ 0.51
GAPDH-202ENST00000396856 RBM6P78332 1123 aaKnown RBP18.22■□□□□ 0.51
GAPDH-202ENST00000396856 HFM1A2PYH4 1435 aa18.22■□□□□ 0.51
GAPDH-202ENST00000396856 ATF3P18847 181 aa18.21■□□□□ 0.51
GAPDH-202ENST00000396856 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
GAPDH-202ENST00000396856 SPHKAPQ2M3C7 1700 aa18.19■□□□□ 0.5
GAPDH-202ENST00000396856 C14orf37Q86TY3 774 aa18.18■□□□□ 0.5
GAPDH-202ENST00000396856 PTPRUQ92729 1446 aa18.17■□□□□ 0.5
GAPDH-202ENST00000396856 EP400Q96L91 3159 aa18.16■□□□□ 0.5
GAPDH-202ENST00000396856 LRRC59Q96AG4 307 aaKnown RBP18.15■□□□□ 0.5
GAPDH-202ENST00000396856 AMOTL2Q9Y2J4 779 aa18.15■□□□□ 0.5
GAPDH-202ENST00000396856 TRPM2O94759 1503 aa18.14■□□□□ 0.49
GAPDH-202ENST00000396856 ASXL1Q8IXJ9 1541 aa18.14■□□□□ 0.49
GAPDH-202ENST00000396856 NUTM2DQ5VT03 806 aaPredicted RBP18.14■□□□□ 0.49
GAPDH-202ENST00000396856 C8orf37Q96NL8 207 aa18.14■□□□□ 0.49
GAPDH-202ENST00000396856 PNPLA6Q8IY17 1366 aa18.13■□□□□ 0.49
GAPDH-202ENST00000396856 DCCP43146 1447 aa18.13■□□□□ 0.49
GAPDH-202ENST00000396856 MST1RQ04912 1400 aa18.13■□□□□ 0.49
GAPDH-202ENST00000396856 NHSL1Q5SYE7 1610 aa18.12■□□□□ 0.49
GAPDH-202ENST00000396856 ZNF326Q5BKZ1 582 aaKnown RBP18.12■□□□□ 0.49
GAPDH-202ENST00000396856 SETBP1Q9Y6X0 1596 aa18.12■□□□□ 0.49
GAPDH-202ENST00000396856 DDX17Q92841 729 aaKnown RBP18.11■□□□□ 0.49
GAPDH-202ENST00000396856 ZRANB1Q9UGI0 708 aa18.11■□□□□ 0.49
GAPDH-202ENST00000396856 CLTCL1P53675 1640 aa18.1■□□□□ 0.49
GAPDH-202ENST00000396856 ATAD2Q6PL18 1390 aa18.1■□□□□ 0.49
GAPDH-202ENST00000396856 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
GAPDH-202ENST00000396856 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
GAPDH-202ENST00000396856 FNBP4Q8N3X1 1017 aaPredicted RBP18.06■□□□□ 0.48
GAPDH-202ENST00000396856 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
GAPDH-202ENST00000396856 NEXMIFQ5QGS0 1516 aa18.05■□□□□ 0.48
GAPDH-202ENST00000396856 KIF1BO60333 1816 aa18.05■□□□□ 0.48
GAPDH-202ENST00000396856 ADAMTS2O95450 1211 aa18.04■□□□□ 0.48
GAPDH-202ENST00000396856 NRXN3Q9Y4C0 1643 aa18.04■□□□□ 0.48
GAPDH-202ENST00000396856 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
GAPDH-202ENST00000396856 CCDC125Q86Z20 511 aa18.03■□□□□ 0.48
GAPDH-202ENST00000396856 USP21Q9UK80 565 aa18.03■□□□□ 0.48
GAPDH-202ENST00000396856 RPGRIP1LQ68CZ1 1315 aa18.02■□□□□ 0.48
GAPDH-202ENST00000396856 VGFO15240 615 aaPredicted RBP18.02■□□□□ 0.48
GAPDH-202ENST00000396856 TRPC5Q9UL62 973 aaPredicted RBP18.02■□□□□ 0.48
GAPDH-202ENST00000396856 ATRNO75882 1429 aa18.01■□□□□ 0.47
GAPDH-202ENST00000396856 FOXD1Q16676 465 aa18.01■□□□□ 0.47
GAPDH-202ENST00000396856 LAMC1P11047 1609 aa18.01■□□□□ 0.47
GAPDH-202ENST00000396856 SOS2Q07890 1332 aaPredicted RBP18■□□□□ 0.47
GAPDH-202ENST00000396856 METP08581 1390 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms