RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 DUOX2Q9NRD8 1548 aa15.56■□□□□ 0.08
LDHC-202ENST00000396215 KCNA4P22459 653 aa15.55■□□□□ 0.08
LDHC-202ENST00000396215 RBM33Q96EV2 1170 aaKnown RBP15.55■□□□□ 0.08
LDHC-202ENST00000396215 SLC26A8Q96RN1 970 aa15.55■□□□□ 0.08
LDHC-202ENST00000396215 NCOA3Q9Y6Q9 1424 aa15.54■□□□□ 0.08
LDHC-202ENST00000396215 RXRBP28702 533 aa15.54■□□□□ 0.08
LDHC-202ENST00000396215 TRIM52Q96A61 297 aa15.54■□□□□ 0.08
LDHC-202ENST00000396215 IDI1Q13907 227 aa15.53■□□□□ 0.08
LDHC-202ENST00000396215 SHPRHQ149N8 1683 aa15.53■□□□□ 0.08
LDHC-202ENST00000396215 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
LDHC-202ENST00000396215 AHDC1Q5TGY3 1603 aaPredicted RBP15.51■□□□□ 0.07
LDHC-202ENST00000396215 CHD2O14647 1828 aaKnown RBP15.51■□□□□ 0.07
LDHC-202ENST00000396215 MEX3CQ5U5Q3 659 aaKnown RBP15.5■□□□□ 0.07
LDHC-202ENST00000396215 ERBINQ96RT1 1412 aa15.5■□□□□ 0.07
LDHC-202ENST00000396215 LMTK2Q8IWU2 1503 aa15.49■□□□□ 0.07
LDHC-202ENST00000396215 NOS1P29475 1434 aa15.47■□□□□ 0.07
LDHC-202ENST00000396215 ADGRB3O60242 1522 aa15.47■□□□□ 0.07
LDHC-202ENST00000396215 MYOM3Q5VTT5 1437 aa15.46■□□□□ 0.07
LDHC-202ENST00000396215 SLC52A1Q9NWF4 448 aa15.46■□□□□ 0.07
LDHC-202ENST00000396215 DIP2AQ14689 1571 aa15.45■□□□□ 0.06
LDHC-202ENST00000396215 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
LDHC-202ENST00000396215 PLEKHG1Q9ULL1 1385 aa15.45■□□□□ 0.06
LDHC-202ENST00000396215 CADPS2Q86UW7 1296 aa15.44■□□□□ 0.06
LDHC-202ENST00000396215 KANK1Q14678 1352 aa15.44■□□□□ 0.06
LDHC-202ENST00000396215 ZFYVE9O95405 1425 aa15.43■□□□□ 0.06
LDHC-202ENST00000396215 C19orf44Q9H6X5 657 aa15.43■□□□□ 0.06
LDHC-202ENST00000396215 TBX22Q9Y458 520 aa15.43■□□□□ 0.06
LDHC-202ENST00000396215 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.42■□□□□ 0.06
LDHC-202ENST00000396215 AFF2P51816 1311 aa15.42■□□□□ 0.06
LDHC-202ENST00000396215 RGS12O14924 1447 aa15.41■□□□□ 0.06
LDHC-202ENST00000396215 HDGFP51858 240 aaKnown RBP15.4■□□□□ 0.06
LDHC-202ENST00000396215 RBM6P78332 1123 aaKnown RBP15.4■□□□□ 0.06
LDHC-202ENST00000396215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.06
LDHC-202ENST00000396215 SETD5Q9C0A6 1442 aa15.4■□□□□ 0.06
LDHC-202ENST00000396215 PIK3R4Q99570 1358 aa15.39■□□□□ 0.05
LDHC-202ENST00000396215 BRINP3Q76B58 766 aa15.39■□□□□ 0.05
LDHC-202ENST00000396215 BCANQ96GW7 911 aa15.39■□□□□ 0.05
LDHC-202ENST00000396215 RRP7BPQ9NSQ0 103 aa15.39■□□□□ 0.05
LDHC-202ENST00000396215 EP400Q96L91 3159 aa15.38■□□□□ 0.05
LDHC-202ENST00000396215 ABCC5O15440 1437 aa15.38■□□□□ 0.05
LDHC-202ENST00000396215 ATF3P18847 181 aa15.38■□□□□ 0.05
LDHC-202ENST00000396215 CROCC2H7BZ55 1655 aa15.38■□□□□ 0.05
LDHC-202ENST00000396215 QTRT2Q9H974 415 aaKnown RBP15.37■□□□□ 0.05
LDHC-202ENST00000396215 RIMS2Q9UQ26 1411 aa15.36■□□□□ 0.05
LDHC-202ENST00000396215 RPRD2Q5VT52 1461 aaKnown RBP15.36■□□□□ 0.05
LDHC-202ENST00000396215 DCCP43146 1447 aa15.35■□□□□ 0.05
LDHC-202ENST00000396215 ADAMTS13Q76LX8 1427 aa15.35■□□□□ 0.05
LDHC-202ENST00000396215 NUTM2BA6NNL0 878 aaPredicted RBP15.35■□□□□ 0.05
LDHC-202ENST00000396215 NUTM2EB1AL46 878 aaPredicted RBP15.35■□□□□ 0.05
LDHC-202ENST00000396215 NUTM2AQ8IVF1 878 aaPredicted RBP15.35■□□□□ 0.05
LDHC-202ENST00000396215 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
LDHC-202ENST00000396215 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
LDHC-202ENST00000396215 MYO5BQ9ULV0 1848 aa15.33■□□□□ 0.05
LDHC-202ENST00000396215 TMEM131LA2VDJ0 1609 aa15.33■□□□□ 0.04
LDHC-202ENST00000396215 NHSL1Q5SYE7 1610 aa15.33■□□□□ 0.04
LDHC-202ENST00000396215 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.33■□□□□ 0.04
LDHC-202ENST00000396215 LRRC59Q96AG4 307 aaKnown RBP15.33■□□□□ 0.04
LDHC-202ENST00000396215 ATAD2Q6PL18 1390 aa15.33■□□□□ 0.04
LDHC-202ENST00000396215 ASXL1Q8IXJ9 1541 aa15.33■□□□□ 0.04
LDHC-202ENST00000396215 PPP1R15AO75807 674 aaPredicted RBP15.32■□□□□ 0.04
LDHC-202ENST00000396215 NGLY1Q96IV0 654 aa15.32■□□□□ 0.04
LDHC-202ENST00000396215 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
LDHC-202ENST00000396215 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
LDHC-202ENST00000396215 NUTM2DQ5VT03 806 aaPredicted RBP15.31■□□□□ 0.04
LDHC-202ENST00000396215 DAPK1P53355 1430 aa15.3■□□□□ 0.04
LDHC-202ENST00000396215 GCC2Q8IWJ2 1684 aa15.3■□□□□ 0.04
LDHC-202ENST00000396215 C8orf37Q96NL8 207 aa15.3■□□□□ 0.04
LDHC-202ENST00000396215 PNPLA6Q8IY17 1366 aa15.29■□□□□ 0.04
LDHC-202ENST00000396215 ANKRD30AQ9BXX3 1397 aa15.29■□□□□ 0.04
LDHC-202ENST00000396215 MST1RQ04912 1400 aa15.28■□□□□ 0.04
LDHC-202ENST00000396215 CCDC125Q86Z20 511 aa15.28■□□□□ 0.04
LDHC-202ENST00000396215 SETBP1Q9Y6X0 1596 aa15.28■□□□□ 0.04
LDHC-202ENST00000396215 VPS8Q8N3P4 1428 aa15.27■□□□□ 0.04
LDHC-202ENST00000396215 PTPRUQ92729 1446 aa15.27■□□□□ 0.04
LDHC-202ENST00000396215 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
LDHC-202ENST00000396215 AMOTL2Q9Y2J4 779 aa15.27■□□□□ 0.04
LDHC-202ENST00000396215 PTPN23Q9H3S7 1636 aa15.27■□□□□ 0.03
LDHC-202ENST00000396215 TRPM2O94759 1503 aa15.27■□□□□ 0.03
LDHC-202ENST00000396215 FNBP4Q8N3X1 1017 aaPredicted RBP15.24■□□□□ 0.03
LDHC-202ENST00000396215 XRN1Q8IZH2 1706 aaKnown RBP15.23■□□□□ 0.03
LDHC-202ENST00000396215 TRPC5Q9UL62 973 aaPredicted RBP15.23■□□□□ 0.03
LDHC-202ENST00000396215 LAMC1P11047 1609 aa15.23■□□□□ 0.03
LDHC-202ENST00000396215 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
LDHC-202ENST00000396215 UNC13BO14795 1591 aa15.22■□□□□ 0.03
LDHC-202ENST00000396215 ATRNO75882 1429 aa15.21■□□□□ 0.03
LDHC-202ENST00000396215 USP21Q9UK80 565 aa15.21■□□□□ 0.03
LDHC-202ENST00000396215 PTCH1Q13635 1447 aa15.2■□□□□ 0.02
LDHC-202ENST00000396215 CHIC2Q9UKJ5 165 aa15.2■□□□□ 0.02
LDHC-202ENST00000396215 SOS2Q07890 1332 aaPredicted RBP15.18■□□□□ 0.02
LDHC-202ENST00000396215 ADGRL3Q9HAR2 1447 aa15.18■□□□□ 0.02
LDHC-202ENST00000396215 ADAMTS2O95450 1211 aa15.18■□□□□ 0.02
LDHC-202ENST00000396215 DDX17Q92841 729 aaKnown RBP15.18■□□□□ 0.02
LDHC-202ENST00000396215 ANKRD50Q9ULJ7 1429 aa15.17■□□□□ 0.02
LDHC-202ENST00000396215 NRXN3Q9Y4C0 1643 aa15.17■□□□□ 0.02
LDHC-202ENST00000396215 CHGAP10645 457 aaKnown RBP15.16■□□□□ 0.02
LDHC-202ENST00000396215 C1orf167Q5SNV9 1468 aa15.14■□□□□ 0.01
LDHC-202ENST00000396215 LRP5O75197 1615 aa15.14■□□□□ 0.01
LDHC-202ENST00000396215 COL22A1Q8NFW1 1626 aaPredicted RBP15.14■□□□□ 0.01
LDHC-202ENST00000396215 E9PCH4 1651 aa15.14■□□□□ 0.01
LDHC-202ENST00000396215 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms