RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 FAM50AQ14320 339 aaKnown RBP10.08□□□□□ -0.8
LMO3-205ENST00000396205 KNDC1Q76NI1 1749 aa10.07□□□□□ -0.8
LMO3-205ENST00000396205 HRCP23327 699 aa10.07□□□□□ -0.8
LMO3-205ENST00000396205 LAMC1P11047 1609 aa10.07□□□□□ -0.8
LMO3-205ENST00000396205 LRRC7Q96NW7 1537 aa10.07□□□□□ -0.8
LMO3-205ENST00000396205 NUP155O75694 1391 aa10.05□□□□□ -0.8
LMO3-205ENST00000396205 NCKAP5LQ9HCH0 1330 aa10.04□□□□□ -0.8
LMO3-205ENST00000396205 RIMS2Q9UQ26 1411 aa10.04□□□□□ -0.8
LMO3-205ENST00000396205 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.03□□□□□ -0.8
LMO3-205ENST00000396205 CHIC2Q9UKJ5 165 aa10.03□□□□□ -0.8
LMO3-205ENST00000396205 NRXN1Q9ULB1 1477 aa10.02□□□□□ -0.8
LMO3-205ENST00000396205 IDI1Q13907 227 aa10.02□□□□□ -0.8
LMO3-205ENST00000396205 ADAMTS13Q76LX8 1427 aa10.02□□□□□ -0.8
LMO3-205ENST00000396205 DCCP43146 1447 aa10.02□□□□□ -0.81
LMO3-205ENST00000396205 HDGFP51858 240 aaKnown RBP10.02□□□□□ -0.81
LMO3-205ENST00000396205 MYOM2P54296 1465 aa10.01□□□□□ -0.81
LMO3-205ENST00000396205 RPGRIP1LQ68CZ1 1315 aa10.01□□□□□ -0.81
LMO3-205ENST00000396205 ILDR1Q86SU0 546 aaPredicted RBP10□□□□□ -0.81
LMO3-205ENST00000396205 EID1Q9Y6B2 187 aa10□□□□□ -0.81
LMO3-205ENST00000396205 SETD5Q9C0A6 1442 aa10□□□□□ -0.81
LMO3-205ENST00000396205 SPATA31E1Q6ZUB1 1445 aa10□□□□□ -0.81
LMO3-205ENST00000396205 PTCH1Q13635 1447 aa9.99□□□□□ -0.81
LMO3-205ENST00000396205 KIAA1210Q9ULL0 1709 aa9.99□□□□□ -0.81
LMO3-205ENST00000396205 LTKP29376 864 aa9.98□□□□□ -0.81
LMO3-205ENST00000396205 TBX22Q9Y458 520 aa9.98□□□□□ -0.81
LMO3-205ENST00000396205 ZNF335Q9H4Z2 1342 aaPredicted RBP9.98□□□□□ -0.81
LMO3-205ENST00000396205 TECPR2O15040 1411 aa9.97□□□□□ -0.81
LMO3-205ENST00000396205 AHDC1Q5TGY3 1603 aaPredicted RBP9.96□□□□□ -0.81
LMO3-205ENST00000396205 KCNA6P17658 529 aa9.96□□□□□ -0.81
LMO3-205ENST00000396205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.96□□□□□ -0.82
LMO3-205ENST00000396205 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.96□□□□□ -0.82
LMO3-205ENST00000396205 FAM135BQ49AJ0 1406 aa9.95□□□□□ -0.82
LMO3-205ENST00000396205 TXNDC2Q86VQ3 553 aa9.95□□□□□ -0.82
LMO3-205ENST00000396205 NHSL1Q5SYE7 1610 aa9.95□□□□□ -0.82
LMO3-205ENST00000396205 NALCNQ8IZF0 1738 aa9.95□□□□□ -0.82
LMO3-205ENST00000396205 PLPPR3Q6T4P5 718 aa9.94□□□□□ -0.82
LMO3-205ENST00000396205 CDC42BPGQ6DT37 1551 aa9.94□□□□□ -0.82
LMO3-205ENST00000396205 DLC1Q96QB1 1528 aa9.94□□□□□ -0.82
LMO3-205ENST00000396205 SHPRHQ149N8 1683 aa9.94□□□□□ -0.82
LMO3-205ENST00000396205 ANKRD30BQ9BXX2 1392 aa9.93□□□□□ -0.82
LMO3-205ENST00000396205 ADGRB2O60241 1585 aa9.93□□□□□ -0.82
LMO3-205ENST00000396205 PIK3C2GO75747 1445 aa9.93□□□□□ -0.82
LMO3-205ENST00000396205 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
LMO3-205ENST00000396205 ROBO1Q9Y6N7 1651 aa9.93□□□□□ -0.82
LMO3-205ENST00000396205 CCDC144AA2RUR9 1427 aa9.92□□□□□ -0.82
LMO3-205ENST00000396205 RAB3GAP2Q9H2M9 1393 aa9.9□□□□□ -0.82
LMO3-205ENST00000396205 ASXL1Q8IXJ9 1541 aa9.9□□□□□ -0.82
LMO3-205ENST00000396205 PTPRUQ92729 1446 aa9.9□□□□□ -0.82
LMO3-205ENST00000396205 COL16A1Q07092 1604 aaPredicted RBP9.9□□□□□ -0.82
LMO3-205ENST00000396205 TOM1O60784 492 aa9.89□□□□□ -0.83
LMO3-205ENST00000396205 STAG3Q9UJ98 1225 aa9.89□□□□□ -0.83
LMO3-205ENST00000396205 KIF1AQ12756 1690 aa9.88□□□□□ -0.83
LMO3-205ENST00000396205 ADGRL3Q9HAR2 1447 aa9.88□□□□□ -0.83
LMO3-205ENST00000396205 COL22A1Q8NFW1 1626 aaPredicted RBP9.88□□□□□ -0.83
LMO3-205ENST00000396205 FMN2Q9NZ56 1722 aa9.88□□□□□ -0.83
LMO3-205ENST00000396205 PHLPP1O60346 1717 aa9.88□□□□□ -0.83
LMO3-205ENST00000396205 SIRT1Q96EB6 747 aa9.87□□□□□ -0.83
LMO3-205ENST00000396205 MPHOSPH9Q99550 1183 aa9.87□□□□□ -0.83
LMO3-205ENST00000396205 ADGRB1O14514 1584 aa9.87□□□□□ -0.83
LMO3-205ENST00000396205 MED1Q15648 1581 aaPredicted RBP9.87□□□□□ -0.83
LMO3-205ENST00000396205 TMEM94Q12767 1356 aa9.87□□□□□ -0.83
LMO3-205ENST00000396205 VGFO15240 615 aaPredicted RBP9.86□□□□□ -0.83
LMO3-205ENST00000396205 SLC4A1APQ9BWU0 796 aaKnown RBP9.86□□□□□ -0.83
LMO3-205ENST00000396205 MSH6P52701 1360 aa9.85□□□□□ -0.83
LMO3-205ENST00000396205 ARHGEF28Q8N1W1 1705 aaKnown RBP9.84□□□□□ -0.83
LMO3-205ENST00000396205 ABCC11Q96J66 1382 aa9.84□□□□□ -0.83
LMO3-205ENST00000396205 LRPPRCP42704 1394 aaKnown RBP9.83□□□□□ -0.84
LMO3-205ENST00000396205 MST1RQ04912 1400 aa9.83□□□□□ -0.84
LMO3-205ENST00000396205 METP08581 1390 aa9.83□□□□□ -0.84
LMO3-205ENST00000396205 ITGAEP38570 1179 aa9.82□□□□□ -0.84
LMO3-205ENST00000396205 ITSN1Q15811 1721 aa9.82□□□□□ -0.84
LMO3-205ENST00000396205 UBAP1LF5GYI3 381 aa9.81□□□□□ -0.84
LMO3-205ENST00000396205 PPP1R15AO75807 674 aaPredicted RBP9.81□□□□□ -0.84
LMO3-205ENST00000396205 TOPAZ1Q8N9V7 1692 aa9.81□□□□□ -0.84
LMO3-205ENST00000396205 MARF1Q9Y4F3 1742 aaKnown RBP9.81□□□□□ -0.84
LMO3-205ENST00000396205 PPARGC1BQ86YN6 1023 aaKnown RBP9.8□□□□□ -0.84
LMO3-205ENST00000396205 C19orf44Q9H6X5 657 aa9.79□□□□□ -0.84
LMO3-205ENST00000396205 TRPM1Q7Z4N2 1603 aa9.79□□□□□ -0.84
LMO3-205ENST00000396205 CADPS2Q86UW7 1296 aa9.79□□□□□ -0.84
LMO3-205ENST00000396205 TRIM52Q96A61 297 aa9.79□□□□□ -0.84
LMO3-205ENST00000396205 ANKARQ7Z5J8 1434 aa9.78□□□□□ -0.84
LMO3-205ENST00000396205 YTHDC2Q9H6S0 1430 aaKnown RBP9.78□□□□□ -0.84
LMO3-205ENST00000396205 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.78□□□□□ -0.84
LMO3-205ENST00000396205 SLC26A8Q96RN1 970 aa9.78□□□□□ -0.84
LMO3-205ENST00000396205 USP32Q8NFA0 1604 aa9.77□□□□□ -0.84
LMO3-205ENST00000396205 C14orf93Q9H972 538 aaKnown RBP9.77□□□□□ -0.84
LMO3-205ENST00000396205 AMOTL2Q9Y2J4 779 aa9.77□□□□□ -0.84
LMO3-205ENST00000396205 PROSER2Q86WR7 435 aaPredicted RBP9.77□□□□□ -0.85
LMO3-205ENST00000396205 C1orf167Q5SNV9 1468 aa9.76□□□□□ -0.85
LMO3-205ENST00000396205 CRYBG1Q9Y4K1 1723 aa9.76□□□□□ -0.85
LMO3-205ENST00000396205 ROBO2Q9HCK4 1378 aa9.76□□□□□ -0.85
LMO3-205ENST00000396205 ABCA3Q99758 1704 aa9.76□□□□□ -0.85
LMO3-205ENST00000396205 DHX57Q6P158 1386 aaKnown RBP9.76□□□□□ -0.85
LMO3-205ENST00000396205 TRPM3Q9HCF6 1732 aaPredicted RBP9.76□□□□□ -0.85
LMO3-205ENST00000396205 EIF3AQ14152 1382 aaKnown RBP9.75□□□□□ -0.85
LMO3-205ENST00000396205 PXDNQ92626 1479 aa9.75□□□□□ -0.85
LMO3-205ENST00000396205 ZNF326Q5BKZ1 582 aaKnown RBP9.74□□□□□ -0.85
LMO3-205ENST00000396205 JCADQ9P266 1359 aa9.74□□□□□ -0.85
LMO3-205ENST00000396205 USP54Q70EL1 1684 aa9.74□□□□□ -0.85
LMO3-205ENST00000396205 TULP4Q9NRJ4 1543 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms